Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.4□□□□□ -1.87
APOEP02649 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC3.4□□□□□ -1.87
APOEP02649 OR4A2P-201ENST00000527276 913 ntBASIC3.4□□□□□ -1.87
APOEP02649 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.4□□□□□ -1.87
APOEP02649 AC026894.1-202ENST00000533843 477 ntTSL 5 BASIC3.4□□□□□ -1.87
APOEP02649 CASP1-216ENST00000534497 825 ntTSL 5 BASIC3.4□□□□□ -1.87
APOEP02649 LRRC37A5P-202ENST00000536054 1095 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
APOEP02649 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.4□□□□□ -1.87
APOEP02649 FOPNL-204ENST00000573396 735 ntTSL 3 BASIC3.4□□□□□ -1.87
APOEP02649 AP000919.1-202ENST00000581139 1264 ntBASIC3.4□□□□□ -1.87
APOEP02649 AC098617.1-215ENST00000594798 1152 ntTSL 5 BASIC3.4□□□□□ -1.87
APOEP02649 AC012468.1-201ENST00000604888 430 ntBASIC3.4□□□□□ -1.87
APOEP02649 AC096577.2-201ENST00000611455 153 ntBASIC3.4□□□□□ -1.87
APOEP02649 AC073476.4-201ENST00000628409 72 ntBASIC3.4□□□□□ -1.87
APOEP02649 AC107398.4-201ENST00000635489 765 ntTSL 2 BASIC3.4□□□□□ -1.87
APOEP02649 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.4□□□□□ -1.87
APOEP02649 AC117529.2-201ENST00000512159 2068 ntBASIC3.4□□□□□ -1.87
APOEP02649 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
APOEP02649 PIK3C2G-201ENST00000266497 4764 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
APOEP02649 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.87
APOEP02649 THEMIS-201ENST00000368248 3866 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
APOEP02649 MIER3-203ENST00000381213 5198 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
APOEP02649 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.39□□□□□ -1.87
APOEP02649 AL161457.2-203ENST00000590767 2663 ntTSL 5 BASIC3.39□□□□□ -1.87
APOEP02649 CACNB4-222ENST00000636350 7654 ntTSL 5 BASIC3.39□□□□□ -1.87
APOEP02649 ATP2B1-201ENST00000261173 6777 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
APOEP02649 RNU1-70P-201ENST00000362618 164 ntBASIC3.39□□□□□ -1.87
APOEP02649 SNORD56.3-201ENST00000363507 71 ntBASIC3.39□□□□□ -1.87
APOEP02649 MIR153-1-201ENST00000384914 90 ntBASIC3.39□□□□□ -1.87
APOEP02649 HMGB1P10-201ENST00000395823 563 ntBASIC3.39□□□□□ -1.87
APOEP02649 NDUFB4P5-201ENST00000415445 361 ntBASIC3.39□□□□□ -1.87
APOEP02649 LINC01794-201ENST00000420187 549 ntTSL 4 BASIC3.39□□□□□ -1.87
APOEP02649 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC3.39□□□□□ -1.87
APOEP02649 AL512641.1-201ENST00000427232 548 ntTSL 3 BASIC3.39□□□□□ -1.87
APOEP02649 TRIM60P3Y-201ENST00000432201 673 ntBASIC3.39□□□□□ -1.87
APOEP02649 AL031663.1-201ENST00000437445 219 ntBASIC3.39□□□□□ -1.87
APOEP02649 CST9LP2-201ENST00000437612 320 ntBASIC3.39□□□□□ -1.87
APOEP02649 AC105402.2-201ENST00000438503 358 ntBASIC3.39□□□□□ -1.87
APOEP02649 AC108860.1-201ENST00000484521 383 ntBASIC3.39□□□□□ -1.87
APOEP02649 CD200R1-205ENST00000490004 778 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
APOEP02649 MGAT4D-203ENST00000511113 1125 ntAPPRIS P2 TSL 5 BASIC3.39□□□□□ -1.87
APOEP02649 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
APOEP02649 AP002340.1-201ENST00000529298 285 ntTSL 3 BASIC3.39□□□□□ -1.87
APOEP02649 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC3.39□□□□□ -1.87
APOEP02649 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC3.39□□□□□ -1.87
APOEP02649 AC011824.2-201ENST00000579896 579 ntTSL 4 BASIC3.39□□□□□ -1.87
APOEP02649 AC010928.1-202ENST00000589354 473 ntTSL 3 BASIC3.39□□□□□ -1.87
APOEP02649 AL606834.2-201ENST00000602954 668 ntBASIC3.39□□□□□ -1.87
APOEP02649 LLPHP1-201ENST00000603571 367 ntBASIC3.39□□□□□ -1.87
APOEP02649 AC113194.1-201ENST00000606037 500 ntBASIC3.39□□□□□ -1.87
APOEP02649 AC117490.2-201ENST00000610042 594 ntBASIC3.39□□□□□ -1.87
APOEP02649 AC009464.1-201ENST00000615731 469 ntBASIC3.39□□□□□ -1.87
APOEP02649 MME-216ENST00000615825 5523 ntAPPRIS P1 TSL 1 (best) BASIC3.39□□□□□ -1.87
APOEP02649 C8orf22-201ENST00000303202 1499 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
APOEP02649 PROS1-203ENST00000407433 3335 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
APOEP02649 AL359715.4-201ENST00000606629 1436 ntBASIC3.38□□□□□ -1.87
APOEP02649 IL36B-201ENST00000259213 1186 ntTSL 1 (best) BASIC3.38□□□□□ -1.87
APOEP02649 OR5J2-201ENST00000312298 939 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
APOEP02649 RNA5SP383-201ENST00000362934 120 ntBASIC3.38□□□□□ -1.87
APOEP02649 SNORA38.1-201ENST00000364172 131 ntBASIC3.38□□□□□ -1.87
APOEP02649 SNORA70.4-201ENST00000365509 134 ntBASIC3.38□□□□□ -1.87
APOEP02649 AL357075.1-201ENST00000404107 726 ntBASIC3.38□□□□□ -1.87
APOEP02649 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.38□□□□□ -1.87
APOEP02649 AC063979.1-201ENST00000415539 377 ntBASIC3.38□□□□□ -1.87
APOEP02649 DSCR4-IT1-201ENST00000417138 424 ntTSL 5 BASIC3.38□□□□□ -1.87
APOEP02649 RPL23AP22-201ENST00000437556 453 ntBASIC3.38□□□□□ -1.87
APOEP02649 FTH1P1-201ENST00000437933 532 ntBASIC3.38□□□□□ -1.87
APOEP02649 AC091862.1-201ENST00000438016 1100 ntBASIC3.38□□□□□ -1.87
APOEP02649 AC018495.1-201ENST00000440266 452 ntTSL 3 BASIC3.38□□□□□ -1.87
APOEP02649 Z99127.3-201ENST00000448158 395 ntBASIC3.38□□□□□ -1.87
APOEP02649 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.38□□□□□ -1.87
APOEP02649 CAB39P1-201ENST00000502277 460 ntBASIC3.38□□□□□ -1.87
APOEP02649 AC093722.1-201ENST00000504882 489 ntTSL 3 BASIC3.38□□□□□ -1.87
APOEP02649 AC067904.2-201ENST00000517322 1283 ntBASIC3.38□□□□□ -1.87
APOEP02649 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.38□□□□□ -1.87
APOEP02649 SKP1-210ENST00000522855 802 ntAPPRIS P4 TSL 2 BASIC3.38□□□□□ -1.87
APOEP02649 AP000790.2-201ENST00000534388 522 ntTSL 3 BASIC3.38□□□□□ -1.87
APOEP02649 MIR5680-201ENST00000577577 84 ntBASIC3.38□□□□□ -1.87
APOEP02649 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.38□□□□□ -1.87
APOEP02649 AC115085.1-201ENST00000588924 229 ntBASIC3.38□□□□□ -1.87
APOEP02649 AL683887.1-201ENST00000603401 287 ntTSL 3 BASIC3.38□□□□□ -1.87
APOEP02649 AC011468.4-201ENST00000603942 409 ntBASIC3.38□□□□□ -1.87
APOEP02649 AC090525.3-201ENST00000605601 189 ntBASIC3.38□□□□□ -1.87
APOEP02649 AC016877.3-201ENST00000606778 504 ntBASIC3.38□□□□□ -1.87
APOEP02649 AL451074.6-201ENST00000608512 729 ntBASIC3.38□□□□□ -1.87
APOEP02649 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.38□□□□□ -1.87
APOEP02649 AC121761.2-201ENST00000617300 689 ntBASIC3.38□□□□□ -1.87
APOEP02649 OR6C1-202ENST00000642104 2055 ntAPPRIS P1 BASIC3.38□□□□□ -1.87
APOEP02649 FAM35CP-201ENST00000554755 2470 ntBASIC3.37□□□□□ -1.87
APOEP02649 AC093010.3-201ENST00000570269 15214 ntBASIC3.37□□□□□ -1.87
APOEP02649 ADAM5-201ENST00000359790 1663 ntTSL 1 (best) BASIC3.37□□□□□ -1.87
APOEP02649 RPL7P26-201ENST00000333817 754 ntBASIC3.37□□□□□ -1.87
APOEP02649 SNORA31-201ENST00000362607 130 ntBASIC3.37□□□□□ -1.87
APOEP02649 RNU6-618P-201ENST00000363518 112 ntBASIC3.37□□□□□ -1.87
APOEP02649 AC003092.2-201ENST00000411946 446 ntTSL 2 BASIC3.37□□□□□ -1.87
APOEP02649 MTND2P16-201ENST00000419987 799 ntBASIC3.37□□□□□ -1.87
APOEP02649 MTCO1P45-201ENST00000431457 267 ntBASIC3.37□□□□□ -1.87
APOEP02649 OR6C71P-201ENST00000432580 913 ntBASIC3.37□□□□□ -1.87
APOEP02649 AC007563.3-201ENST00000433233 371 ntBASIC3.37□□□□□ -1.87
APOEP02649 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC3.37□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 80.6 ms