Protein–RNA interactions for Protein: P02458

COL2A1, Collagen alpha-1(II) chain, humanhuman

Predicted RBP Predictions only

Length 1,487 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1P02458 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC4□□□□□ -1.77
COL2A1P02458 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC4□□□□□ -1.77
COL2A1P02458 TMEM161BP1-201ENST00000457388 1457 ntBASIC4□□□□□ -1.77
COL2A1P02458 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4□□□□□ -1.77
COL2A1P02458 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC4□□□□□ -1.77
COL2A1P02458 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
COL2A1P02458 ADAM28-201ENST00000265769 7052 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
COL2A1P02458 ZNF705G-201ENST00000400156 3644 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
COL2A1P02458 SMC1B-201ENST00000357450 4201 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
COL2A1P02458 RNU6-40P-201ENST00000384254 107 ntBASIC3.99□□□□□ -1.77
COL2A1P02458 AL663023.1-201ENST00000412932 853 ntTSL 3 BASIC3.99□□□□□ -1.77
COL2A1P02458 FRMPD3-AS1-201ENST00000415252 457 ntTSL 3 BASIC3.99□□□□□ -1.77
COL2A1P02458 P4HA2-AS1-201ENST00000417667 839 ntTSL 3 BASIC3.99□□□□□ -1.77
COL2A1P02458 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
COL2A1P02458 AC091493.1-201ENST00000426218 411 ntTSL 3 BASIC3.99□□□□□ -1.77
COL2A1P02458 AL512656.1-201ENST00000427492 401 ntTSL 2 BASIC3.99□□□□□ -1.77
COL2A1P02458 AC008065.1-201ENST00000428525 348 ntBASIC3.99□□□□□ -1.77
COL2A1P02458 TRBV26OR9-2-201ENST00000432077 293 ntBASIC3.99□□□□□ -1.77
COL2A1P02458 AL359706.1-201ENST00000437748 315 ntTSL 3 BASIC3.99□□□□□ -1.77
COL2A1P02458 SKP1P1-201ENST00000438081 489 ntBASIC3.99□□□□□ -1.77
COL2A1P02458 AC069540.1-201ENST00000446320 988 ntBASIC3.99□□□□□ -1.77
COL2A1P02458 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC3.99□□□□□ -1.77
COL2A1P02458 AL450344.2-201ENST00000455229 614 ntTSL 5 BASIC3.99□□□□□ -1.77
COL2A1P02458 AP001992.1-205ENST00000462248 379 ntBASIC3.99□□□□□ -1.77
COL2A1P02458 RPL7P38-201ENST00000488396 739 ntBASIC3.99□□□□□ -1.77
COL2A1P02458 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC3.99□□□□□ -1.77
COL2A1P02458 AC012625.1-201ENST00000515153 625 ntTSL 5 BASIC3.99□□□□□ -1.77
COL2A1P02458 ZNF706-202ENST00000517844 604 ntAPPRIS P1 TSL 3 BASIC3.99□□□□□ -1.77
COL2A1P02458 AP003066.2-201ENST00000529375 555 ntBASIC3.99□□□□□ -1.77
COL2A1P02458 OR5AP1P-201ENST00000529730 940 ntBASIC3.99□□□□□ -1.77
COL2A1P02458 AC090049.1-201ENST00000551075 1011 ntTSL 3 BASIC3.99□□□□□ -1.77
COL2A1P02458 AL049869.2-201ENST00000556634 365 ntTSL 2 BASIC3.99□□□□□ -1.77
COL2A1P02458 LINC01146-208ENST00000557355 548 ntTSL 4 BASIC3.99□□□□□ -1.77
COL2A1P02458 DISC1FP1-201ENST00000561596 545 ntTSL 5 BASIC3.99□□□□□ -1.77
COL2A1P02458 AC023825.1-201ENST00000566704 1030 ntBASIC3.99□□□□□ -1.77
COL2A1P02458 AC113368.1-201ENST00000603736 382 ntBASIC3.99□□□□□ -1.77
COL2A1P02458 AC068880.4-201ENST00000623082 495 ntBASIC3.99□□□□□ -1.77
COL2A1P02458 SLC38A9-218ENST00000512595 1756 ntTSL 2 BASIC3.99□□□□□ -1.77
COL2A1P02458 PRKAA2-202ENST00000610361 9280 ntAPPRIS ALT1 TSL 5 BASIC3.99□□□□□ -1.77
COL2A1P02458 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
COL2A1P02458 CEP170P1-201ENST00000502249 4587 ntBASIC3.99□□□□□ -1.77
COL2A1P02458 FAM81B-201ENST00000283357 1560 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL2A1P02458 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
COL2A1P02458 MCF2-208ENST00000519895 3346 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
COL2A1P02458 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.99□□□□□ -1.77
COL2A1P02458 AC119744.1-201ENST00000454746 1715 ntBASIC3.99□□□□□ -1.77
COL2A1P02458 SGIP1-206ENST00000435165 3646 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
COL2A1P02458 Y_RNA.169-201ENST00000363745 96 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 Y_RNA.436-201ENST00000384097 102 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 SNORD116-1-201ENST00000384335 95 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 MIR1302-8-201ENST00000408342 128 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 EPGN-202ENST00000413830 1196 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL2A1P02458 Z99755.1-201ENST00000414048 380 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC3.98□□□□□ -1.77
COL2A1P02458 OR6C64P-201ENST00000419708 825 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 AL445528.1-201ENST00000426330 420 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 AC234781.2-201ENST00000426370 994 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 MTCO1P51-201ENST00000427672 1060 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 MTND2P5-201ENST00000432656 1006 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 AC008278.2-201ENST00000438178 409 ntTSL 3 BASIC3.98□□□□□ -1.77
COL2A1P02458 MOB1AP2-201ENST00000446060 614 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 NEGR1-IT1-201ENST00000453121 534 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COL2A1P02458 AC010307.1-201ENST00000467206 836 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 RPL27AP5-201ENST00000469428 449 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 RPL23AP71-201ENST00000470966 469 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC3.98□□□□□ -1.77
COL2A1P02458 RNU6-964P-201ENST00000516524 69 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 NRG1-IT1-202ENST00000521463 742 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COL2A1P02458 AP001205.1-201ENST00000521625 449 ntTSL 3 BASIC3.98□□□□□ -1.77
COL2A1P02458 AC009623.2-201ENST00000522524 465 ntTSL 3 BASIC3.98□□□□□ -1.77
COL2A1P02458 AC118942.1-201ENST00000529674 1035 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.98□□□□□ -1.77
COL2A1P02458 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.98□□□□□ -1.77
COL2A1P02458 AC125611.1-201ENST00000549563 229 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 MTCYBP23-201ENST00000558717 1102 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC3.98□□□□□ -1.77
COL2A1P02458 AC009019.1-202ENST00000568410 405 ntTSL 3 BASIC3.98□□□□□ -1.77
COL2A1P02458 DSCR9-205ENST00000585273 751 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
COL2A1P02458 AC011492.1-201ENST00000600023 315 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 AC069304.3-201ENST00000603938 1084 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 AC026741.1-201ENST00000605892 482 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 AC021755.4-201ENST00000616620 456 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 CYCSP41-201ENST00000616920 296 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 BANCR-201ENST00000624238 473 ntTSL 2 BASIC3.98□□□□□ -1.77
COL2A1P02458 AC079416.3-201ENST00000624479 549 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC3.98□□□□□ -1.77
COL2A1P02458 AC017007.4-201ENST00000503353 1352 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL2A1P02458 CPXCR1-203ENST00000614120 1485 ntAPPRIS P1 TSL 3 BASIC3.98□□□□□ -1.77
COL2A1P02458 FAM169A-201ENST00000389156 5990 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
COL2A1P02458 FAM35BP-202ENST00000497389 3337 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.98□□□□□ -1.77
COL2A1P02458 OR9K2-202ENST00000641329 3120 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
COL2A1P02458 FPGT-TNNI3K-202ENST00000370895 7566 ntTSL 2 BASIC3.98□□□□□ -1.77
COL2A1P02458 RNU6-618P-201ENST00000363518 112 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 AL034403.1-201ENST00000399414 885 ntBASIC3.98□□□□□ -1.77
COL2A1P02458 AC020571.1-201ENST00000430904 768 ntTSL 2 BASIC3.98□□□□□ -1.77
COL2A1P02458 AL138830.1-201ENST00000435802 402 ntTSL 3 BASIC3.98□□□□□ -1.77
COL2A1P02458 AL136234.1-201ENST00000437080 349 ntTSL 2 BASIC3.98□□□□□ -1.77
COL2A1P02458 CNTN4-AS2-201ENST00000447256 426 ntTSL 3 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms