Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 AC068768.1-204ENST00000544890 796 ntTSL 4 BASIC3.89□□□□□ -1.79
PDGFBP01127 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.89□□□□□ -1.79
PDGFBP01127 AC069240.1-201ENST00000548774 375 ntBASIC3.89□□□□□ -1.79
PDGFBP01127 CBX3P5-201ENST00000552017 521 ntBASIC3.89□□□□□ -1.79
PDGFBP01127 NCAPGP2-201ENST00000557911 754 ntBASIC3.89□□□□□ -1.79
PDGFBP01127 BPTFP1-201ENST00000579209 492 ntBASIC3.89□□□□□ -1.79
PDGFBP01127 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC3.89□□□□□ -1.79
PDGFBP01127 AC105094.1-201ENST00000588245 316 ntTSL 3 BASIC3.89□□□□□ -1.79
PDGFBP01127 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.89□□□□□ -1.79
PDGFBP01127 AC007687.1-201ENST00000602704 304 ntBASIC3.89□□□□□ -1.79
PDGFBP01127 AL137849.1-201ENST00000604767 169 ntBASIC3.89□□□□□ -1.79
PDGFBP01127 RNU1-30P-201ENST00000606575 163 ntBASIC3.89□□□□□ -1.79
PDGFBP01127 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.89□□□□□ -1.79
PDGFBP01127 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.89□□□□□ -1.79
PDGFBP01127 AL138955.1-201ENST00000622881 1040 ntBASIC3.89□□□□□ -1.79
PDGFBP01127 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
PDGFBP01127 AL365361.1-201ENST00000566942 3481 ntBASIC3.89□□□□□ -1.79
PDGFBP01127 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC3.89□□□□□ -1.79
PDGFBP01127 ZNF682-209ENST00000597972 1538 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
PDGFBP01127 NKTR-219ENST00000617821 7319 ntTSL 5 BASIC3.89□□□□□ -1.79
PDGFBP01127 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.89□□□□□ -1.79
PDGFBP01127 ZNF849P-201ENST00000594711 1566 ntBASIC3.89□□□□□ -1.79
PDGFBP01127 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC3.89□□□□□ -1.79
PDGFBP01127 AL049781.1-201ENST00000623195 3585 ntBASIC3.88□□□□□ -1.79
PDGFBP01127 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
PDGFBP01127 AL157700.1-201ENST00000561973 1432 ntBASIC3.88□□□□□ -1.79
PDGFBP01127 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC3.88□□□□□ -1.79
PDGFBP01127 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.88□□□□□ -1.79
PDGFBP01127 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
PDGFBP01127 SNORA31-201ENST00000362607 130 ntBASIC3.88□□□□□ -1.79
PDGFBP01127 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PDGFBP01127 SNORD96B-201ENST00000386148 79 ntBASIC3.88□□□□□ -1.79
PDGFBP01127 SFR1P1-201ENST00000403720 688 ntBASIC3.88□□□□□ -1.79
PDGFBP01127 AL355615.1-201ENST00000406187 641 ntBASIC3.88□□□□□ -1.79
PDGFBP01127 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.88□□□□□ -1.79
PDGFBP01127 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.88□□□□□ -1.79
PDGFBP01127 AC013410.2-201ENST00000422627 201 ntBASIC3.88□□□□□ -1.79
PDGFBP01127 AC096632.1-201ENST00000427395 310 ntBASIC3.88□□□□□ -1.79
PDGFBP01127 AC017083.1-201ENST00000428093 483 ntBASIC3.88□□□□□ -1.79
PDGFBP01127 RPL36P19-201ENST00000430744 301 ntBASIC3.88□□□□□ -1.79
PDGFBP01127 TTTY20-201ENST00000434487 259 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PDGFBP01127 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC3.88□□□□□ -1.79
PDGFBP01127 RPL23AP89-201ENST00000439324 255 ntBASIC3.88□□□□□ -1.79
PDGFBP01127 AC092625.1-201ENST00000442706 393 ntTSL 3 BASIC3.88□□□□□ -1.79
PDGFBP01127 AC010469.1-201ENST00000463864 576 ntBASIC3.88□□□□□ -1.79
PDGFBP01127 RN7SL807P-201ENST00000470923 297 ntBASIC3.88□□□□□ -1.79
PDGFBP01127 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.88□□□□□ -1.79
PDGFBP01127 TMED11P-201ENST00000479478 690 ntBASIC3.88□□□□□ -1.79
PDGFBP01127 AC108467.1-201ENST00000515623 672 ntTSL 3 BASIC3.88□□□□□ -1.79
PDGFBP01127 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.88□□□□□ -1.79
PDGFBP01127 AP003066.2-201ENST00000529375 555 ntBASIC3.88□□□□□ -1.79
PDGFBP01127 AP002992.1-202ENST00000530842 551 ntTSL 2 BASIC3.88□□□□□ -1.79
PDGFBP01127 MTND5P21-201ENST00000531961 522 ntBASIC3.88□□□□□ -1.79
PDGFBP01127 AC087894.1-201ENST00000538359 518 ntBASIC3.88□□□□□ -1.79
PDGFBP01127 RERG-IT1-201ENST00000539734 301 ntTSL 3 BASIC3.88□□□□□ -1.79
PDGFBP01127 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.88□□□□□ -1.79
PDGFBP01127 AC010591.1-201ENST00000603941 649 ntBASIC3.88□□□□□ -1.79
PDGFBP01127 IGHV3-29-201ENST00000604817 344 ntBASIC3.88□□□□□ -1.79
PDGFBP01127 AC107294.1-201ENST00000609524 467 ntBASIC3.88□□□□□ -1.79
PDGFBP01127 AC064801.1-201ENST00000612025 407 ntBASIC3.88□□□□□ -1.79
PDGFBP01127 AC135507.2-201ENST00000612443 309 ntBASIC3.88□□□□□ -1.79
PDGFBP01127 AC105227.2-201ENST00000615075 605 ntBASIC3.88□□□□□ -1.79
PDGFBP01127 AL512427.1-201ENST00000618593 349 ntBASIC3.88□□□□□ -1.79
PDGFBP01127 RMST_9.1-201ENST00000619945 193 ntBASIC3.88□□□□□ -1.79
PDGFBP01127 AL391262.2-201ENST00000622466 494 ntBASIC3.88□□□□□ -1.79
PDGFBP01127 AL049777.1-201ENST00000622740 518 ntBASIC3.88□□□□□ -1.79
PDGFBP01127 AC012594.1-272ENST00000625790 710 ntTSL 5 BASIC3.88□□□□□ -1.79
PDGFBP01127 LINC00836-203ENST00000628620 1179 ntTSL 5 BASIC3.88□□□□□ -1.79
PDGFBP01127 AC099654.8-201ENST00000637757 681 ntBASIC3.88□□□□□ -1.79
PDGFBP01127 WAC-221ENST00000628285 2740 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
PDGFBP01127 OR8D1-202ENST00000641015 8286 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
PDGFBP01127 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
PDGFBP01127 PIGN-210ENST00000588571 1960 ntTSL 5 BASIC3.87□□□□□ -1.79
PDGFBP01127 ZNF107-203ENST00000395391 6094 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PDGFBP01127 ZNF733P-201ENST00000331425 1506 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
PDGFBP01127 ANKRD20A10P-201ENST00000457591 1515 ntBASIC3.87□□□□□ -1.79
PDGFBP01127 UBE2D2-201ENST00000253815 444 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
PDGFBP01127 OR5W2-201ENST00000344514 933 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
PDGFBP01127 SNORA38.1-201ENST00000364172 131 ntBASIC3.87□□□□□ -1.79
PDGFBP01127 SNORD65C-201ENST00000390962 71 ntBASIC3.87□□□□□ -1.79
PDGFBP01127 RNU6-1000P-201ENST00000391066 106 ntBASIC3.87□□□□□ -1.79
PDGFBP01127 SOD2P1-201ENST00000396543 562 ntBASIC3.87□□□□□ -1.79
PDGFBP01127 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
PDGFBP01127 RSL24D1P1-201ENST00000404972 493 ntBASIC3.87□□□□□ -1.79
PDGFBP01127 AL391863.2-201ENST00000411838 681 ntTSL 2 BASIC3.87□□□□□ -1.79
PDGFBP01127 AC062031.1-201ENST00000414967 747 ntTSL 3 BASIC3.87□□□□□ -1.79
PDGFBP01127 AC007463.1-201ENST00000416534 734 ntTSL 3 BASIC3.87□□□□□ -1.79
PDGFBP01127 AC010881.1-201ENST00000433830 235 ntBASIC3.87□□□□□ -1.79
PDGFBP01127 AC069285.2-201ENST00000440210 275 ntBASIC3.87□□□□□ -1.79
PDGFBP01127 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC3.87□□□□□ -1.79
PDGFBP01127 AC005002.1-201ENST00000447458 540 ntBASIC3.87□□□□□ -1.79
PDGFBP01127 AC025518.1-201ENST00000479856 347 ntBASIC3.87□□□□□ -1.79
PDGFBP01127 AC008696.2-201ENST00000503323 825 ntTSL 3 BASIC3.87□□□□□ -1.79
PDGFBP01127 AC093801.2-201ENST00000503966 1050 ntBASIC3.87□□□□□ -1.79
PDGFBP01127 SUMO2P5-201ENST00000506790 245 ntBASIC3.87□□□□□ -1.79
PDGFBP01127 AC104057.1-201ENST00000515547 497 ntBASIC3.87□□□□□ -1.79
PDGFBP01127 MYL12AP1-201ENST00000518490 515 ntBASIC3.87□□□□□ -1.79
PDGFBP01127 AP003733.3-201ENST00000524942 788 ntTSL 2 BASIC3.87□□□□□ -1.79
PDGFBP01127 AP001992.1-204ENST00000525104 687 ntTSL 3 BASIC3.87□□□□□ -1.79
PDGFBP01127 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 110.7 ms