Protein–RNA interactions for Protein: O43679

LDB2, LIM domain-binding protein 2, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LDB2O43679 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC4.23□□□□□ -1.73
LDB2O43679 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.23□□□□□ -1.73
LDB2O43679 IPO5P1-202ENST00000600039 287 ntBASIC4.23□□□□□ -1.73
LDB2O43679 AC006270.3-201ENST00000605967 1036 ntBASIC4.23□□□□□ -1.73
LDB2O43679 AC091946.2-201ENST00000606105 291 ntBASIC4.23□□□□□ -1.73
LDB2O43679 AC090948.2-201ENST00000607363 564 ntBASIC4.23□□□□□ -1.73
LDB2O43679 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
LDB2O43679 AL591441.2-201ENST00000620059 535 ntTSL 5 BASIC4.23□□□□□ -1.73
LDB2O43679 AC008443.7-201ENST00000622195 246 ntBASIC4.23□□□□□ -1.73
LDB2O43679 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
LDB2O43679 AC098679.5-201ENST00000624394 571 ntBASIC4.23□□□□□ -1.73
LDB2O43679 AP000843.1-201ENST00000624880 701 ntBASIC4.23□□□□□ -1.73
LDB2O43679 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
LDB2O43679 ALCAM-207ENST00000486979 1818 ntTSL 5 BASIC4.23□□□□□ -1.73
LDB2O43679 DMXL2-202ENST00000449909 7465 ntAPPRIS ALT2 TSL 1 (best) BASIC4.23□□□□□ -1.73
LDB2O43679 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.23□□□□□ -1.73
LDB2O43679 ATP8B4-201ENST00000284509 5676 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
LDB2O43679 LRRC63-203ENST00000595396 2327 ntAPPRIS P2 TSL 5 BASIC4.22□□□□□ -1.73
LDB2O43679 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.22□□□□□ -1.73
LDB2O43679 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LDB2O43679 SCEL-205ENST00000535157 3096 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
LDB2O43679 NCOA1-202ENST00000348332 6895 ntAPPRIS P4 TSL 1 (best) BASIC4.22□□□□□ -1.73
LDB2O43679 RNU6-500P-201ENST00000362349 107 ntBASIC4.22□□□□□ -1.73
LDB2O43679 RNA5SP366-201ENST00000365454 123 ntBASIC4.22□□□□□ -1.73
LDB2O43679 MIR92A2-201ENST00000385299 75 ntBASIC4.22□□□□□ -1.73
LDB2O43679 AL355379.1-201ENST00000405542 640 ntBASIC4.22□□□□□ -1.73
LDB2O43679 AL136133.1-201ENST00000413694 376 ntBASIC4.22□□□□□ -1.73
LDB2O43679 FCF1P2-201ENST00000415284 583 ntBASIC4.22□□□□□ -1.73
LDB2O43679 AC092634.6-201ENST00000418558 192 ntBASIC4.22□□□□□ -1.73
LDB2O43679 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC4.22□□□□□ -1.73
LDB2O43679 MTCYBP39-201ENST00000437562 491 ntBASIC4.22□□□□□ -1.73
LDB2O43679 AC003092.1-202ENST00000438538 743 ntTSL 3 BASIC4.22□□□□□ -1.73
LDB2O43679 LINC00415-201ENST00000439079 435 ntTSL 3 BASIC4.22□□□□□ -1.73
LDB2O43679 RPL23AP89-201ENST00000439324 255 ntBASIC4.22□□□□□ -1.73
LDB2O43679 AL359636.3-201ENST00000439471 301 ntTSL 2 BASIC4.22□□□□□ -1.73
LDB2O43679 LINC01825-201ENST00000452381 850 ntTSL 3 BASIC4.22□□□□□ -1.73
LDB2O43679 AC016751.2-201ENST00000453206 280 ntTSL 5 BASIC4.22□□□□□ -1.73
LDB2O43679 AC009963.2-201ENST00000453431 138 ntBASIC4.22□□□□□ -1.73
LDB2O43679 MTCO3P16-201ENST00000454456 754 ntBASIC4.22□□□□□ -1.73
LDB2O43679 LMOD2-201ENST00000456238 918 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LDB2O43679 LINC00377-201ENST00000456588 657 ntTSL 5 BASIC4.22□□□□□ -1.73
LDB2O43679 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC4.22□□□□□ -1.73
LDB2O43679 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
LDB2O43679 SETP11-201ENST00000473027 690 ntBASIC4.22□□□□□ -1.73
LDB2O43679 RPS29P19-201ENST00000479709 171 ntBASIC4.22□□□□□ -1.73
LDB2O43679 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC4.22□□□□□ -1.73
LDB2O43679 AL139147.1-201ENST00000502413 1156 ntTSL 2 BASIC4.22□□□□□ -1.73
LDB2O43679 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
LDB2O43679 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC4.22□□□□□ -1.73
LDB2O43679 MTCO3P7-201ENST00000510008 774 ntBASIC4.22□□□□□ -1.73
LDB2O43679 AC093281.2-201ENST00000510153 597 ntBASIC4.22□□□□□ -1.73
LDB2O43679 TBCA-206ENST00000518338 551 ntTSL 2 BASIC4.22□□□□□ -1.73
LDB2O43679 NDUFA5P2-201ENST00000519723 344 ntBASIC4.22□□□□□ -1.73
LDB2O43679 AC027309.2-201ENST00000520566 192 ntBASIC4.22□□□□□ -1.73
LDB2O43679 SMARCE1P4-201ENST00000523647 241 ntBASIC4.22□□□□□ -1.73
LDB2O43679 RFPL1S-203ENST00000539579 330 ntBASIC4.22□□□□□ -1.73
LDB2O43679 AC007115.1-201ENST00000546853 234 ntBASIC4.22□□□□□ -1.73
LDB2O43679 AC010196.1-201ENST00000550014 450 ntTSL 5 BASIC4.22□□□□□ -1.73
LDB2O43679 LINC02459-201ENST00000551761 474 ntTSL 3 BASIC4.22□□□□□ -1.73
LDB2O43679 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.22□□□□□ -1.73
LDB2O43679 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC4.22□□□□□ -1.73
LDB2O43679 MIR3138-201ENST00000585238 82 ntBASIC4.22□□□□□ -1.73
LDB2O43679 AC011477.5-201ENST00000586571 259 ntBASIC4.22□□□□□ -1.73
LDB2O43679 AL020997.2-201ENST00000602607 184 ntBASIC4.22□□□□□ -1.73
LDB2O43679 WISP1-OT1-201ENST00000602893 642 ntBASIC4.22□□□□□ -1.73
LDB2O43679 PSMA6P4-201ENST00000603247 718 ntBASIC4.22□□□□□ -1.73
LDB2O43679 AL161729.3-201ENST00000603533 673 ntBASIC4.22□□□□□ -1.73
LDB2O43679 AL158063.1-201ENST00000615349 536 ntBASIC4.22□□□□□ -1.73
LDB2O43679 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.22□□□□□ -1.73
LDB2O43679 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC4.22□□□□□ -1.73
LDB2O43679 PCMTD1P7-201ENST00000634506 357 ntBASIC4.22□□□□□ -1.73
LDB2O43679 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.22□□□□□ -1.73
LDB2O43679 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
LDB2O43679 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
LDB2O43679 PLCB4-206ENST00000414679 3947 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
LDB2O43679 RAG2-201ENST00000311485 2388 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LDB2O43679 ZNF43-210ENST00000598381 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
LDB2O43679 AC025125.1-201ENST00000624743 1922 ntBASIC4.22□□□□□ -1.73
LDB2O43679 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC4.22□□□□□ -1.73
LDB2O43679 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
LDB2O43679 LRRC9-202ENST00000445360 4717 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
LDB2O43679 OR8D1-203ENST00000641897 8285 ntAPPRIS P1 BASIC4.22□□□□□ -1.73
LDB2O43679 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
LDB2O43679 PPP2R5C-226ENST00000557095 1307 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
LDB2O43679 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC4.21□□□□□ -1.73
LDB2O43679 MS4A1-201ENST00000345732 3331 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
LDB2O43679 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.73
LDB2O43679 RMDN2-207ENST00000417700 1426 ntTSL 1 (best) BASIC4.21□□□□□ -1.73
LDB2O43679 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
LDB2O43679 GAPT-201ENST00000318469 2119 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
LDB2O43679 GPBP1-205ENST00000511209 2243 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
LDB2O43679 LINC01187-201ENST00000506431 2314 ntTSL 5 BASIC4.21□□□□□ -1.74
LDB2O43679 ABCB5-201ENST00000258738 2906 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
LDB2O43679 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
LDB2O43679 Y_RNA.18-201ENST00000362461 102 ntBASIC4.21□□□□□ -1.74
LDB2O43679 RNU1-94P-201ENST00000362627 173 ntBASIC4.21□□□□□ -1.74
LDB2O43679 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.21□□□□□ -1.74
LDB2O43679 MT-TH-201ENST00000387441 69 ntBASIC4.21□□□□□ -1.74
LDB2O43679 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
LDB2O43679 PIGPP2-201ENST00000411569 458 ntBASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms