Protein–RNA interactions for Protein: O43365

HOXA3, Homeobox protein Hox-A3, humanhuman

Predicted RBP Predictions only

Length 443 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3O43365 CRYAB-201ENST00000227251 848 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
HOXA3O43365 BDH2-201ENST00000296424 1126 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXA3O43365 OR5I1-201ENST00000301532 945 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HOXA3O43365 MT-ND4L-201ENST00000361335 297 ntAPPRIS P1 BASIC4.46□□□□□ -1.7
HOXA3O43365 RNU6-249P-201ENST00000363016 102 ntBASIC4.46□□□□□ -1.7
HOXA3O43365 RNA5SP507-201ENST00000363603 121 ntBASIC4.46□□□□□ -1.7
HOXA3O43365 Y_RNA.157-201ENST00000363638 102 ntBASIC4.46□□□□□ -1.7
HOXA3O43365 PRIM2-202ENST00000370687 909 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXA3O43365 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXA3O43365 SNORA5.1-201ENST00000384275 131 ntBASIC4.46□□□□□ -1.7
HOXA3O43365 MIR1-2-201ENST00000384961 85 ntBASIC4.46□□□□□ -1.7
HOXA3O43365 U3.20-201ENST00000390909 217 ntBASIC4.46□□□□□ -1.7
HOXA3O43365 AC005042.1-201ENST00000393397 800 ntBASIC4.46□□□□□ -1.7
HOXA3O43365 RGS17P1-201ENST00000423358 553 ntBASIC4.46□□□□□ -1.7
HOXA3O43365 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.46□□□□□ -1.7
HOXA3O43365 AL590378.1-201ENST00000426818 303 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXA3O43365 CRIP1P1-201ENST00000427567 185 ntBASIC4.46□□□□□ -1.7
HOXA3O43365 AC137499.1-201ENST00000427602 88 ntBASIC4.46□□□□□ -1.7
HOXA3O43365 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXA3O43365 AL449983.1-201ENST00000430640 414 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXA3O43365 UBE2V1P13-201ENST00000436983 439 ntBASIC4.46□□□□□ -1.7
HOXA3O43365 PATE1-202ENST00000437148 457 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXA3O43365 CBWD4P-201ENST00000445695 655 ntBASIC4.46□□□□□ -1.7
HOXA3O43365 AC007953.1-201ENST00000450500 560 ntTSL 4 BASIC4.46□□□□□ -1.7
HOXA3O43365 RPS27AP17-201ENST00000463344 455 ntBASIC4.46□□□□□ -1.7
HOXA3O43365 AC063943.1-201ENST00000465434 453 ntBASIC4.46□□□□□ -1.7
HOXA3O43365 AC022034.3-201ENST00000471393 478 ntBASIC4.46□□□□□ -1.7
HOXA3O43365 AC093270.2-201ENST00000486157 792 ntBASIC4.46□□□□□ -1.7
HOXA3O43365 RPS3AP50-201ENST00000487064 803 ntBASIC4.46□□□□□ -1.7
HOXA3O43365 RPS21P4-201ENST00000487122 248 ntBASIC4.46□□□□□ -1.7
HOXA3O43365 AC093001.1-201ENST00000489011 551 ntTSL 4 BASIC4.46□□□□□ -1.7
HOXA3O43365 RN7SL447P-201ENST00000494711 245 ntBASIC4.46□□□□□ -1.7
HOXA3O43365 AC072052.1-201ENST00000496556 306 ntBASIC4.46□□□□□ -1.7
HOXA3O43365 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
HOXA3O43365 PGAM1P13-201ENST00000507497 754 ntBASIC4.46□□□□□ -1.7
HOXA3O43365 FGF7P4-201ENST00000509595 295 ntBASIC4.46□□□□□ -1.7
HOXA3O43365 PCBP2P3-201ENST00000509726 843 ntBASIC4.46□□□□□ -1.7
HOXA3O43365 RPS3A-208ENST00000509736 576 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXA3O43365 AC108037.1-201ENST00000514103 423 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXA3O43365 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXA3O43365 RNU4ATAC10P-201ENST00000516967 122 ntBASIC4.46□□□□□ -1.7
HOXA3O43365 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXA3O43365 LYRM2-203ENST00000520318 677 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXA3O43365 RGS5-208ENST00000530507 851 ntAPPRIS ALT1 TSL 3 BASIC4.46□□□□□ -1.7
HOXA3O43365 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.46□□□□□ -1.7
HOXA3O43365 OR4T1P-201ENST00000554933 911 ntBASIC4.46□□□□□ -1.7
HOXA3O43365 AC124068.1-201ENST00000563131 678 ntBASIC4.46□□□□□ -1.7
HOXA3O43365 AC127024.5-201ENST00000580085 462 ntBASIC4.46□□□□□ -1.7
HOXA3O43365 Z98949.1-202ENST00000600211 1282 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXA3O43365 AL513327.3-201ENST00000602618 469 ntBASIC4.46□□□□□ -1.7
HOXA3O43365 AC135507.2-201ENST00000612443 309 ntBASIC4.46□□□□□ -1.7
HOXA3O43365 MIR7155-201ENST00000615925 56 ntBASIC4.46□□□□□ -1.7
HOXA3O43365 AL354950.2-201ENST00000617939 290 ntBASIC4.46□□□□□ -1.7
HOXA3O43365 PCDH15-207ENST00000395430 7002 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXA3O43365 AC125336.1-201ENST00000508893 2827 ntBASIC4.46□□□□□ -1.7
HOXA3O43365 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXA3O43365 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC4.46□□□□□ -1.7
HOXA3O43365 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXA3O43365 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXA3O43365 AC011460.1-201ENST00000636268 1834 ntBASIC4.46□□□□□ -1.7
HOXA3O43365 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC4.46□□□□□ -1.7
HOXA3O43365 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
HOXA3O43365 PTPRO-203ENST00000442921 3030 ntAPPRIS ALT2 TSL 1 (best) BASIC4.46□□□□□ -1.7
HOXA3O43365 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC4.45□□□□□ -1.7
HOXA3O43365 AL031119.1-201ENST00000404707 1879 ntBASIC4.45□□□□□ -1.7
HOXA3O43365 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC4.45□□□□□ -1.7
HOXA3O43365 TRIM22-201ENST00000379965 2989 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXA3O43365 EPC2-201ENST00000258484 3649 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXA3O43365 ADAM24P-201ENST00000398655 2101 ntBASIC4.45□□□□□ -1.7
HOXA3O43365 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
HOXA3O43365 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC4.45□□□□□ -1.7
HOXA3O43365 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
HOXA3O43365 PCDH15-217ENST00000414778 9234 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
HOXA3O43365 PCDH15-227ENST00000614895 9249 ntAPPRIS ALT2 TSL 5 BASIC4.45□□□□□ -1.7
HOXA3O43365 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC4.45□□□□□ -1.7
HOXA3O43365 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC4.45□□□□□ -1.7
HOXA3O43365 RPL7P26-201ENST00000333817 754 ntBASIC4.45□□□□□ -1.7
HOXA3O43365 AC005294.1-201ENST00000355509 281 ntBASIC4.45□□□□□ -1.7
HOXA3O43365 RNU1-130P-201ENST00000363930 160 ntBASIC4.45□□□□□ -1.7
HOXA3O43365 SNORD81.2-201ENST00000365153 76 ntBASIC4.45□□□□□ -1.7
HOXA3O43365 AL356057.2-201ENST00000403318 432 ntBASIC4.45□□□□□ -1.7
HOXA3O43365 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXA3O43365 AC211486.3-201ENST00000412694 621 ntBASIC4.45□□□□□ -1.7
HOXA3O43365 EEF1A1P40-201ENST00000412883 573 ntBASIC4.45□□□□□ -1.7
HOXA3O43365 AL162394.1-201ENST00000413271 419 ntTSL 2 BASIC4.45□□□□□ -1.7
HOXA3O43365 MTCO3P12-201ENST00000416718 547 ntBASIC4.45□□□□□ -1.7
HOXA3O43365 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXA3O43365 RBM6-203ENST00000421682 684 ntTSL 2 BASIC4.45□□□□□ -1.7
HOXA3O43365 RIMKLBP2-201ENST00000424737 654 ntBASIC4.45□□□□□ -1.7
HOXA3O43365 LINC01731-201ENST00000428035 420 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXA3O43365 CEACAMP1-201ENST00000434624 1035 ntBASIC4.45□□□□□ -1.7
HOXA3O43365 AC079781.2-201ENST00000446424 169 ntBASIC4.45□□□□□ -1.7
HOXA3O43365 AC104651.2-201ENST00000447549 528 ntBASIC4.45□□□□□ -1.7
HOXA3O43365 AC021382.1-201ENST00000483523 359 ntBASIC4.45□□□□□ -1.7
HOXA3O43365 AC012123.2-201ENST00000485809 248 ntBASIC4.45□□□□□ -1.7
HOXA3O43365 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC4.45□□□□□ -1.7
HOXA3O43365 AC110792.2-201ENST00000510278 224 ntBASIC4.45□□□□□ -1.7
HOXA3O43365 LINC02117-201ENST00000513673 540 ntTSL 4 BASIC4.45□□□□□ -1.7
HOXA3O43365 SCARNA24.1-201ENST00000516465 137 ntBASIC4.45□□□□□ -1.7
HOXA3O43365 AC069113.2-201ENST00000517735 359 ntTSL 3 BASIC4.45□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms