Protein–RNA interactions for Protein: O14529

CUX2, Homeobox protein cut-like 2, humanhuman

Predictions only

Length 1,486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2O14529 AC116616.1-201ENST00000508815 366 ntTSL 3 BASIC5.27□□□□□ -1.57
CUX2O14529 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC5.27□□□□□ -1.57
CUX2O14529 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC5.27□□□□□ -1.57
CUX2O14529 AL355922.5-201ENST00000553534 351 ntTSL 3 BASIC5.27□□□□□ -1.57
CUX2O14529 SLC6A15-202ENST00000309283 3108 ntTSL 5 BASIC5.27□□□□□ -1.57
CUX2O14529 SMCO3-201ENST00000316048 2104 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CUX2O14529 MIR196B-201ENST00000384852 84 ntBASIC5.26□□□□□ -1.57
CUX2O14529 AL360182.1-201ENST00000397433 468 ntBASIC5.26□□□□□ -1.57
CUX2O14529 AC234781.4-201ENST00000419384 244 ntBASIC5.26□□□□□ -1.57
CUX2O14529 LINC00457-201ENST00000428706 413 ntTSL 3 BASIC5.26□□□□□ -1.57
CUX2O14529 AC117440.1-201ENST00000474107 571 ntBASIC5.26□□□□□ -1.57
CUX2O14529 LINC00632-202ENST00000498732 746 ntTSL 3 BASIC5.26□□□□□ -1.57
CUX2O14529 AC012613.1-201ENST00000522685 387 ntTSL 2 BASIC5.26□□□□□ -1.57
CUX2O14529 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC5.26□□□□□ -1.57
CUX2O14529 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC5.26□□□□□ -1.57
CUX2O14529 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC5.26□□□□□ -1.57
CUX2O14529 PRELID3BP8-201ENST00000604148 295 ntBASIC5.26□□□□□ -1.57
CUX2O14529 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC5.26□□□□□ -1.57
CUX2O14529 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.26□□□□□ -1.57
CUX2O14529 C3orf85-208ENST00000622536 925 ntAPPRIS P5 TSL 5 BASIC5.26□□□□□ -1.57
CUX2O14529 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CUX2O14529 AC123767.1-201ENST00000519537 1439 ntTSL 5 BASIC5.26□□□□□ -1.57
CUX2O14529 PHC3-215ENST00000495893 12666 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
CUX2O14529 Y_RNA.62-201ENST00000362840 99 ntBASIC5.26□□□□□ -1.57
CUX2O14529 SNORD67-201ENST00000390833 111 ntBASIC5.26□□□□□ -1.57
CUX2O14529 RPL30P2-201ENST00000414021 291 ntBASIC5.26□□□□□ -1.57
CUX2O14529 AC087499.2-201ENST00000432861 149 ntBASIC5.26□□□□□ -1.57
CUX2O14529 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC5.26□□□□□ -1.57
CUX2O14529 SNRPFP2-201ENST00000440710 251 ntBASIC5.26□□□□□ -1.57
CUX2O14529 AL662791.1-201ENST00000441992 928 ntBASIC5.26□□□□□ -1.57
CUX2O14529 RPL23AP67-201ENST00000465341 474 ntBASIC5.26□□□□□ -1.57
CUX2O14529 RN7SL20P-201ENST00000488827 297 ntBASIC5.26□□□□□ -1.57
CUX2O14529 CCNHP1-201ENST00000513311 678 ntBASIC5.26□□□□□ -1.57
CUX2O14529 AC018797.3-201ENST00000513388 1241 ntBASIC5.26□□□□□ -1.57
CUX2O14529 NPM1P52-201ENST00000518264 846 ntBASIC5.26□□□□□ -1.57
CUX2O14529 EMP1-206ENST00000537612 505 ntTSL 3 BASIC5.26□□□□□ -1.57
CUX2O14529 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC5.26□□□□□ -1.57
CUX2O14529 AC009977.1-201ENST00000586015 570 ntBASIC5.26□□□□□ -1.57
CUX2O14529 SLC38A2-209ENST00000551374 2802 ntTSL 2 BASIC5.26□□□□□ -1.57
CUX2O14529 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
CUX2O14529 ANKRD36BP1-201ENST00000358576 1779 ntBASIC5.25□□□□□ -1.57
CUX2O14529 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC5.25□□□□□ -1.57
CUX2O14529 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.25□□□□□ -1.57
CUX2O14529 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CUX2O14529 CDC27P2-201ENST00000425026 1922 ntBASIC5.25□□□□□ -1.57
CUX2O14529 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC5.25□□□□□ -1.57
CUX2O14529 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC5.25□□□□□ -1.57
CUX2O14529 AC239798.3-201ENST00000454459 408 ntBASIC5.25□□□□□ -1.57
CUX2O14529 THOC7-AS1-201ENST00000468961 673 ntTSL 2 BASIC5.25□□□□□ -1.57
CUX2O14529 LINC02283-201ENST00000511634 474 ntTSL 3 BASIC5.25□□□□□ -1.57
CUX2O14529 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC5.25□□□□□ -1.57
CUX2O14529 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC5.25□□□□□ -1.57
CUX2O14529 AP001542.1-201ENST00000591314 200 ntBASIC5.25□□□□□ -1.57
CUX2O14529 AL356274.1-201ENST00000617064 410 ntBASIC5.25□□□□□ -1.57
CUX2O14529 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC5.25□□□□□ -1.57
CUX2O14529 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC5.25□□□□□ -1.57
CUX2O14529 HNRNPC-203ENST00000430246 4501 ntAPPRIS P2 TSL 1 (best) BASIC5.25□□□□□ -1.57
CUX2O14529 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC5.24□□□□□ -1.57
CUX2O14529 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC5.24□□□□□ -1.57
CUX2O14529 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC5.24□□□□□ -1.57
CUX2O14529 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
CUX2O14529 ARL5AP4-201ENST00000430731 512 ntBASIC5.24□□□□□ -1.57
CUX2O14529 AC009263.1-201ENST00000441193 1239 ntBASIC5.24□□□□□ -1.57
CUX2O14529 AL035701.1-201ENST00000444038 462 ntTSL 3 BASIC5.24□□□□□ -1.57
CUX2O14529 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC5.24□□□□□ -1.57
CUX2O14529 ARL2BPP6-201ENST00000512757 439 ntBASIC5.24□□□□□ -1.57
CUX2O14529 MIR2114-201ENST00000516645 80 ntBASIC5.24□□□□□ -1.57
CUX2O14529 NRG1-IT1-201ENST00000520444 758 ntTSL 3 BASIC5.24□□□□□ -1.57
CUX2O14529 AL078612.2-201ENST00000525133 646 ntTSL 3 BASIC5.24□□□□□ -1.57
CUX2O14529 AC009511.1-201ENST00000543527 191 ntTSL 5 BASIC5.24□□□□□ -1.57
CUX2O14529 AL121839.1-201ENST00000556233 1185 ntBASIC5.24□□□□□ -1.57
CUX2O14529 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC5.24□□□□□ -1.57
CUX2O14529 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC5.24□□□□□ -1.57
CUX2O14529 OR6R2P-201ENST00000609216 300 ntBASIC5.24□□□□□ -1.57
CUX2O14529 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC5.24□□□□□ -1.57
CUX2O14529 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CUX2O14529 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
CUX2O14529 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC5.23□□□□□ -1.57
CUX2O14529 MTCO1P7-201ENST00000419523 1542 ntBASIC5.23□□□□□ -1.57
CUX2O14529 RNU4-44P-201ENST00000363050 141 ntBASIC5.23□□□□□ -1.57
CUX2O14529 MIR592-201ENST00000384959 97 ntBASIC5.23□□□□□ -1.57
CUX2O14529 RHEBP3-201ENST00000411920 351 ntBASIC5.23□□□□□ -1.57
CUX2O14529 AL445213.1-201ENST00000412589 747 ntBASIC5.23□□□□□ -1.57
CUX2O14529 AC091544.1-201ENST00000484702 348 ntBASIC5.23□□□□□ -1.57
CUX2O14529 ALDH7A1P3-201ENST00000492517 345 ntBASIC5.23□□□□□ -1.57
CUX2O14529 CKS1BP2-201ENST00000497342 240 ntBASIC5.23□□□□□ -1.57
CUX2O14529 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.23□□□□□ -1.57
CUX2O14529 MIR5047-201ENST00000579212 100 ntBASIC5.23□□□□□ -1.57
CUX2O14529 UGP2-203ENST00000445915 1955 ntTSL 2 BASIC5.23□□□□□ -1.57
CUX2O14529 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC5.23□□□□□ -1.57
CUX2O14529 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC5.22□□□□□ -1.57
CUX2O14529 DCLRE1A-202ENST00000369305 4241 ntAPPRIS P1 TSL 5 BASIC5.22□□□□□ -1.57
CUX2O14529 RPS3AP26-201ENST00000398259 784 ntBASIC5.22□□□□□ -1.57
CUX2O14529 RNU2-22P-201ENST00000411266 212 ntBASIC5.22□□□□□ -1.57
CUX2O14529 AC124916.1-201ENST00000444020 547 ntBASIC5.22□□□□□ -1.57
CUX2O14529 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC5.22□□□□□ -1.57
CUX2O14529 RPL37P4-201ENST00000448908 268 ntBASIC5.22□□□□□ -1.57
CUX2O14529 AC010468.1-201ENST00000461022 817 ntBASIC5.22□□□□□ -1.57
CUX2O14529 RPL31P13-201ENST00000484151 370 ntBASIC5.22□□□□□ -1.57
CUX2O14529 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 134.7 ms