Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 AC092185.1-201ENST00000491371 97 ntBASIC3.08□□□□□ -1.92
UPK1AO00322 OR9N1P-202ENST00000494289 481 ntBASIC3.08□□□□□ -1.92
UPK1AO00322 PGRMC2-203ENST00000503588 818 ntTSL 4 BASIC3.08□□□□□ -1.92
UPK1AO00322 SOD1P3-201ENST00000518682 454 ntBASIC3.08□□□□□ -1.92
UPK1AO00322 NOP56P3-201ENST00000549457 385 ntBASIC3.08□□□□□ -1.92
UPK1AO00322 AC012414.2-201ENST00000559474 187 ntBASIC3.08□□□□□ -1.92
UPK1AO00322 NR2F2-AS1-211ENST00000561402 589 ntTSL 3 BASIC3.08□□□□□ -1.92
UPK1AO00322 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC3.08□□□□□ -1.92
UPK1AO00322 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.08□□□□□ -1.92
UPK1AO00322 AC010511.1-202ENST00000590229 573 ntTSL 4 BASIC3.08□□□□□ -1.92
UPK1AO00322 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.08□□□□□ -1.92
UPK1AO00322 AC242628.1-201ENST00000606810 391 ntBASIC3.08□□□□□ -1.92
UPK1AO00322 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.08□□□□□ -1.92
UPK1AO00322 LEPR-202ENST00000349533 8227 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
UPK1AO00322 AC138915.3-201ENST00000562908 1389 ntBASIC3.08□□□□□ -1.92
UPK1AO00322 AP001148.1-201ENST00000624124 2359 ntBASIC3.08□□□□□ -1.92
UPK1AO00322 PHF6-201ENST00000332070 4759 ntAPPRIS P2 TSL 1 (best) BASIC3.08□□□□□ -1.92
UPK1AO00322 TTN-204ENST00000360870 18218 ntTSL 5 BASIC3.08□□□□□ -1.92
UPK1AO00322 DMD-201ENST00000288447 3856 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
UPK1AO00322 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
UPK1AO00322 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.07□□□□□ -1.92
UPK1AO00322 RNU1-33P-201ENST00000364249 162 ntBASIC3.07□□□□□ -1.92
UPK1AO00322 SNORA70E-201ENST00000384492 135 ntBASIC3.07□□□□□ -1.92
UPK1AO00322 MIR153-1-201ENST00000384914 90 ntBASIC3.07□□□□□ -1.92
UPK1AO00322 MIR449B-201ENST00000384995 97 ntBASIC3.07□□□□□ -1.92
UPK1AO00322 CCNB2P1-201ENST00000399411 1150 ntBASIC3.07□□□□□ -1.92
UPK1AO00322 HMGN1P24-201ENST00000412282 298 ntBASIC3.07□□□□□ -1.92
UPK1AO00322 AC007899.1-201ENST00000412776 775 ntBASIC3.07□□□□□ -1.92
UPK1AO00322 AL024509.3-201ENST00000413898 745 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
UPK1AO00322 AL590727.1-201ENST00000418652 771 ntTSL 2 BASIC3.07□□□□□ -1.92
UPK1AO00322 AC069157.1-201ENST00000421749 137 ntBASIC3.07□□□□□ -1.92
UPK1AO00322 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.07□□□□□ -1.92
UPK1AO00322 MTCYBP21-201ENST00000443300 1113 ntBASIC3.07□□□□□ -1.92
UPK1AO00322 AC008155.2-201ENST00000464337 397 ntBASIC3.07□□□□□ -1.92
UPK1AO00322 AP002884.2-201ENST00000471647 395 ntBASIC3.07□□□□□ -1.92
UPK1AO00322 RPL21P103-201ENST00000479921 488 ntBASIC3.07□□□□□ -1.92
UPK1AO00322 AP002812.1-201ENST00000495378 474 ntBASIC3.07□□□□□ -1.92
UPK1AO00322 AC016687.2-201ENST00000504795 541 ntTSL 5 BASIC3.07□□□□□ -1.92
UPK1AO00322 AC021678.1-201ENST00000505195 936 ntBASIC3.07□□□□□ -1.92
UPK1AO00322 LINC01861-201ENST00000509568 537 ntTSL 4 BASIC3.07□□□□□ -1.92
UPK1AO00322 UBE2NP1-201ENST00000545592 458 ntBASIC3.07□□□□□ -1.92
UPK1AO00322 TRAV37-201ENST00000553906 342 ntBASIC3.07□□□□□ -1.92
UPK1AO00322 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC3.07□□□□□ -1.92
UPK1AO00322 AC025272.1-201ENST00000569661 483 ntTSL 2 BASIC3.07□□□□□ -1.92
UPK1AO00322 AC002546.2-201ENST00000585537 584 ntTSL 3 BASIC3.07□□□□□ -1.92
UPK1AO00322 CXXC1P1-203ENST00000589302 746 ntTSL 3 BASIC3.07□□□□□ -1.92
UPK1AO00322 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.07□□□□□ -1.92
UPK1AO00322 AL162713.1-201ENST00000604480 262 ntBASIC3.07□□□□□ -1.92
UPK1AO00322 AL392112.1-201ENST00000605115 829 ntBASIC3.07□□□□□ -1.92
UPK1AO00322 AC105429.2-201ENST00000610567 517 ntBASIC3.07□□□□□ -1.92
UPK1AO00322 CR589904.2-201ENST00000612533 440 ntBASIC3.07□□□□□ -1.92
UPK1AO00322 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
UPK1AO00322 SNORA50A-202ENST00000629536 136 ntBASIC3.07□□□□□ -1.92
UPK1AO00322 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
UPK1AO00322 AL049737.1-201ENST00000413920 1403 ntBASIC3.07□□□□□ -1.92
UPK1AO00322 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC3.07□□□□□ -1.92
UPK1AO00322 CYSLTR2-201ENST00000282018 4672 ntAPPRIS P1 BASIC3.07□□□□□ -1.92
UPK1AO00322 PCDH15-208ENST00000395432 6901 ntTSL 5 BASIC3.07□□□□□ -1.92
UPK1AO00322 LATS1-201ENST00000253339 4256 ntAPPRIS P1 TSL 1 (best) BASIC3.07□□□□□ -1.92
UPK1AO00322 SPEF2-203ENST00000440995 5964 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
UPK1AO00322 GSTA1-201ENST00000334575 1019 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
UPK1AO00322 OR2L3-201ENST00000359959 2792 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
UPK1AO00322 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC3.06□□□□□ -1.92
UPK1AO00322 IL6ST-204ENST00000381293 612 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
UPK1AO00322 SNORA46-201ENST00000384762 135 ntBASIC3.06□□□□□ -1.92
UPK1AO00322 TAS2R19-201ENST00000390673 1002 ntAPPRIS P1 BASIC3.06□□□□□ -1.92
UPK1AO00322 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.06□□□□□ -1.92
UPK1AO00322 RNA5SP44-201ENST00000410446 133 ntBASIC3.06□□□□□ -1.92
UPK1AO00322 GABPAP-201ENST00000419271 1356 ntBASIC3.06□□□□□ -1.92
UPK1AO00322 OR1AA1P-201ENST00000419597 916 ntBASIC3.06□□□□□ -1.92
UPK1AO00322 AL589765.2-201ENST00000420382 424 ntTSL 3 BASIC3.06□□□□□ -1.92
UPK1AO00322 ZNF33CP-201ENST00000432492 2030 ntBASIC3.06□□□□□ -1.92
UPK1AO00322 AL159987.2-201ENST00000432754 307 ntBASIC3.06□□□□□ -1.92
UPK1AO00322 ARL4AP4-201ENST00000434170 518 ntBASIC3.06□□□□□ -1.92
UPK1AO00322 AL357507.1-201ENST00000435946 669 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
UPK1AO00322 AC005019.1-201ENST00000436455 431 ntBASIC3.06□□□□□ -1.92
UPK1AO00322 RPL7P29-201ENST00000437151 728 ntBASIC3.06□□□□□ -1.92
UPK1AO00322 CST9LP2-201ENST00000437612 320 ntBASIC3.06□□□□□ -1.92
UPK1AO00322 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.06□□□□□ -1.92
UPK1AO00322 CYCSP35-201ENST00000451978 304 ntBASIC3.06□□□□□ -1.92
UPK1AO00322 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.06□□□□□ -1.92
UPK1AO00322 NDUFAF4P3-201ENST00000456468 525 ntBASIC3.06□□□□□ -1.92
UPK1AO00322 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.06□□□□□ -1.92
UPK1AO00322 ST13P14-201ENST00000474095 734 ntBASIC3.06□□□□□ -1.92
UPK1AO00322 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.06□□□□□ -1.92
UPK1AO00322 RN7SL283P-201ENST00000489055 303 ntBASIC3.06□□□□□ -1.92
UPK1AO00322 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.06□□□□□ -1.92
UPK1AO00322 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.06□□□□□ -1.92
UPK1AO00322 AC022784.5-201ENST00000522241 437 ntBASIC3.06□□□□□ -1.92
UPK1AO00322 AP001646.3-201ENST00000526305 446 ntTSL 2 BASIC3.06□□□□□ -1.92
UPK1AO00322 LINC02325-202ENST00000554260 567 ntTSL 4 BASIC3.06□□□□□ -1.92
UPK1AO00322 AC067805.1-201ENST00000559344 470 ntBASIC3.06□□□□□ -1.92
UPK1AO00322 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC3.06□□□□□ -1.92
UPK1AO00322 AC022031.1-201ENST00000585985 2593 ntBASIC3.06□□□□□ -1.92
UPK1AO00322 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.06□□□□□ -1.92
UPK1AO00322 AC007687.1-201ENST00000602704 304 ntBASIC3.06□□□□□ -1.92
UPK1AO00322 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC3.06□□□□□ -1.92
UPK1AO00322 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.06□□□□□ -1.92
UPK1AO00322 STARD13-AS-235ENST00000609335 855 ntTSL 5 BASIC3.06□□□□□ -1.92
UPK1AO00322 AC008264.2-201ENST00000610193 3731 ntBASIC3.06□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 89.2 ms