Protein–RNA interactions for Protein: A0A539

TCRBV7S3A2, T-cell receptor beta variable 4-2 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV7S3A2A0A539 AC146944.4-201ENST00000602697 718 ntBASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 MTCYBP22-201ENST00000603788 447 ntBASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 RNU6-88P-201ENST00000606801 100 ntBASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 AC243773.3-201ENST00000613270 256 ntBASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 AC009237.17-201ENST00000618111 748 ntBASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 AC068722.2-201ENST00000618734 544 ntBASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 C7orf66-201ENST00000624695 435 ntTSL 2 BASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 AC079228.1-201ENST00000624774 1049 ntBASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 AC140479.6-201ENST00000633535 357 ntBASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 AC006927.3-201ENST00000638789 384 ntBASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 EXOC1-202ENST00000349598 3248 ntAPPRIS ALT1 TSL 2 BASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 GPR171-201ENST00000309180 1786 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 GPR180-201ENST00000376958 8822 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC4.29□□□□□ -1.72
TCRBV7S3A2A0A539 AL158163.1-201ENST00000603915 1649 ntBASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 OTUD6B-AS1-201ENST00000522817 4275 ntTSL 2 BASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 GHR-208ENST00000612382 4699 ntAPPRIS P1 TSL 5 BASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 LDHAL6CP-202ENST00000550738 3224 ntBASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 ERCC6-202ENST00000374127 1782 ntBASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 EIF2AP4-201ENST00000424793 1781 ntBASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 MYCBP2-211ENST00000544440 14664 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 OR52E4-202ENST00000641726 2947 ntAPPRIS P1 BASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 AL672167.1-206ENST00000356293 943 ntBASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 RNU6-462P-201ENST00000362659 105 ntBASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 RNA5SP88-201ENST00000365560 109 ntBASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 RPS16P5-201ENST00000406501 404 ntBASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 RNA5SP39-201ENST00000411245 120 ntBASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 TPMTP3-201ENST00000411928 735 ntBASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 AC004870.3-202ENST00000412996 432 ntTSL 3 BASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 OFD1P11Y-201ENST00000418213 1177 ntBASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 MYCBP2-AS2-201ENST00000428716 428 ntTSL 5 BASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 MED14P1-201ENST00000430517 648 ntBASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 AC092839.2-201ENST00000431130 377 ntTSL 3 BASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 AL117351.1-201ENST00000438864 766 ntBASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 AL353748.1-201ENST00000440753 474 ntBASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 VN1R10P-201ENST00000447106 875 ntBASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 AC097493.1-201ENST00000463958 372 ntBASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 AC092757.1-201ENST00000467293 467 ntBASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 MTND6P6-201ENST00000478031 263 ntBASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 RPS29P19-201ENST00000479709 171 ntBASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 AC005726.1-201ENST00000494679 427 ntBASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 AC114981.1-201ENST00000503897 678 ntBASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 AC111000.4-201ENST00000504301 569 ntTSL 5 BASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 AC087241.1-201ENST00000508615 429 ntTSL 5 BASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 AC016598.2-201ENST00000514942 525 ntTSL 5 BASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 RNA5SP216-201ENST00000516111 123 ntBASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 RNA5SP360-201ENST00000516555 118 ntBASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 RN7SKP92-201ENST00000517266 244 ntBASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 AC087276.1-201ENST00000529659 480 ntBASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 ZNF705CP-201ENST00000530515 889 ntBASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 AC092851.1-201ENST00000535964 478 ntBASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 AC023161.2-201ENST00000551218 780 ntBASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 ROCK1P1-201ENST00000573767 549 ntBASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 AP005120.1-201ENST00000579321 352 ntTSL 3 BASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 AC103987.3-201ENST00000582071 292 ntBASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 MIR4512-201ENST00000583257 77 ntBASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 AC008507.1-201ENST00000587506 734 ntBASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 AC092354.1-201ENST00000606057 376 ntBASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 AC090948.1-201ENST00000607464 549 ntBASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 AC231657.1-201ENST00000624313 397 ntBASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 BTG3-AS1-201ENST00000626994 552 ntTSL 4 BASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 FLG-AS1-207ENST00000628475 497 ntTSL 5 BASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 LINC00706-201ENST00000628989 699 ntTSL 3 BASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 FOXP2-226ENST00000635638 2598 ntAPPRIS ALT1 TSL 5 BASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 KATNA1-202ENST00000335647 1684 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 CDK1-202ENST00000373809 1613 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 FGD4-211ENST00000531134 2924 ntTSL 2 BASIC4.28□□□□□ -1.72
TCRBV7S3A2A0A539 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 MTCO1P14-201ENST00000441695 1559 ntBASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 TMEM251-201ENST00000283534 909 ntAPPRIS P1 TSL 1 (best) BASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 RNU1-14P-201ENST00000362759 152 ntBASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 RNU4-21P-201ENST00000362802 126 ntBASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 RNU6-433P-201ENST00000363216 104 ntBASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 RNU6-398P-201ENST00000384143 109 ntBASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 HMGB1P17-201ENST00000403495 628 ntBASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 ZNF603P-201ENST00000405613 487 ntBASIC4.27□□□□□ -1.73
TCRBV7S3A2A0A539 RPL7P8-201ENST00000411964 730 ntBASIC4.27□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 132.7 ms