Protein–RNA interactions for Protein: Q9Y5P4

COL4A3BP, Collagen type IV alpha-3-binding protein, humanhuman

Predictions only

Length 624 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3BPQ9Y5P4 MT-TH-201ENST00000387441 69 ntBASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 AC025750.1-201ENST00000399891 379 ntBASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 AL592291.1-201ENST00000403830 352 ntBASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 MIR1271-201ENST00000408537 86 ntBASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 RNU4-78P-201ENST00000410940 126 ntBASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 Y_RNA.625-201ENST00000411256 107 ntBASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 PLCE1-AS2-201ENST00000419353 459 ntTSL 5 BASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 FABP7P1-201ENST00000424004 391 ntBASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 EZH2P1-201ENST00000431167 291 ntBASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 LINC00189-202ENST00000431661 308 ntTSL 5 BASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 PRELID3BP10-201ENST00000431957 584 ntBASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 RPL34P6-201ENST00000432390 345 ntBASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 AL359265.2-201ENST00000434367 631 ntBASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 AC016831.4-201ENST00000438302 307 ntBASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 LSM1P1-201ENST00000438629 273 ntBASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 AL353613.1-201ENST00000443163 530 ntTSL 3 BASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 LINC00529-201ENST00000443854 241 ntTSL 2 BASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 AL445669.2-201ENST00000454425 421 ntBASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 ST13P14-201ENST00000474095 734 ntBASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 AC109486.1-201ENST00000486833 374 ntBASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 AC097467.3-213ENST00000508191 726 ntTSL 3 BASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 AC091868.1-201ENST00000508746 304 ntBASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 LINC02500-201ENST00000512547 493 ntTSL 3 BASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 AC093677.1-201ENST00000514414 678 ntBASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 MTERF3-203ENST00000522822 1148 ntTSL 2 BASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 OR4P1P-201ENST00000530808 1136 ntBASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 FKBP1BP1-201ENST00000553366 325 ntBASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 ACTR3BP3-201ENST00000565577 979 ntBASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 AC234771.5-201ENST00000600161 514 ntBASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 AL451044.1-201ENST00000604867 238 ntBASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 AC055876.5-201ENST00000605667 259 ntBASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 OR2AS2P-201ENST00000606902 342 ntBASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 AC012360.2-201ENST00000609349 391 ntBASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 RBM12B-AS1-201ENST00000623283 653 ntBASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 ZFRP1-201ENST00000457579 2970 ntBASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 ZNF705E-201ENST00000525199 3442 ntAPPRIS P1 TSL 2 BASIC5.29□□□□□ -1.56
COL4A3BPQ9Y5P4 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 EMSY-204ENST00000524490 4015 ntTSL 2 BASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 AL442639.1-201ENST00000625030 1899 ntBASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 LINC01689-201ENST00000416218 2007 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 PLCB4-204ENST00000378501 5833 ntAPPRIS P4 TSL 5 BASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 GLCE-201ENST00000261858 5037 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 NAMPT-202ENST00000354289 1213 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 TNFRSF17-202ENST00000396495 668 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 ZNF705D-201ENST00000400078 925 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 MTCO1P17-201ENST00000411522 491 ntBASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 RPL7P8-201ENST00000411964 730 ntBASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 HSFY4P-201ENST00000415994 1181 ntBASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 AL389915.1-201ENST00000422463 466 ntBASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 RPS27AP14-201ENST00000422868 454 ntBASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 AC245028.1-201ENST00000423259 256 ntBASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 AL512286.1-201ENST00000439244 400 ntBASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 H2AFZP6-201ENST00000444403 394 ntBASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 CYCSP34-201ENST00000458172 304 ntBASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 AC010326.1-201ENST00000462726 602 ntBASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 AP001025.2-201ENST00000490908 477 ntBASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 RPL23AP72-201ENST00000492447 435 ntBASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 RPL5P23-201ENST00000496040 868 ntBASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 ARL4AP1-201ENST00000503220 705 ntBASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 AC079921.1-201ENST00000509449 946 ntTSL 3 BASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 AC034159.1-201ENST00000513885 583 ntBASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 RNU2-30P-201ENST00000516209 141 ntBASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 LINC02327-203ENST00000550122 738 ntTSL 2 BASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 AC084824.1-201ENST00000550917 1005 ntBASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 NBR2-204ENST00000587322 63 ntBASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 AC080013.6-201ENST00000606185 215 ntBASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 AC011816.2-201ENST00000607089 556 ntBASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 AC097468.3-201ENST00000607956 456 ntBASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 AC093783.1-201ENST00000612976 329 ntBASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 AC022106.2-201ENST00000620114 757 ntBASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 RMDN2-204ENST00000406384 1932 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 ATP13A4-203ENST00000392443 4016 ntTSL 5 BASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 PCDH11X-207ENST00000406881 4156 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC5.28□□□□□ -1.56
COL4A3BPQ9Y5P4 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
COL4A3BPQ9Y5P4 SPEF2-216ENST00000637569 7350 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 99.4 ms