Protein–RNA interactions for Protein: Q9Y2B5

VPS9D1, VPS9 domain-containing protein 1, humanhuman

Predictions only

Length 631 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1Q9Y2B5 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 ACOT13-201ENST00000230048 4047 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 AC005821.1-203ENST00000577270 3145 ntTSL 1 (best) BASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 DTHD1-206ENST00000639862 3819 ntTSL 5 BASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 NLRP4-203ENST00000587891 3201 ntTSL 2 BASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 TC2N-202ENST00000360594 3751 ntAPPRIS P1 TSL 1 (best) BASIC6.78□□□□□ -1.32
VPS9D1Q9Y2B5 ERG-202ENST00000398897 4651 ntTSL 5 BASIC6.77□□□□□ -1.32
VPS9D1Q9Y2B5 DCX-207ENST00000635795 9163 ntAPPRIS P4 TSL 1 (best) BASIC6.77□□□□□ -1.32
VPS9D1Q9Y2B5 MEIOC-202ENST00000409464 4067 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 SATL1-202ENST00000509231 2224 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 DMD-205ENST00000359836 7339 ntTSL 5 BASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 BLM-201ENST00000355112 5258 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 MKL2-202ENST00000571589 8799 ntAPPRIS ALT2 TSL 2 BASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 SLC13A1-201ENST00000194130 3815 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 Y_RNA.261-201ENST00000364631 102 ntBASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 Y_RNA.272-201ENST00000364696 102 ntBASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 SNORA11D-201ENST00000408548 128 ntBASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 SNORA11E-201ENST00000408778 128 ntBASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 DCN-203ENST00000420120 753 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 TRAPPC2P4-201ENST00000421750 331 ntBASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 FDPSP6-201ENST00000425091 512 ntBASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 ETDA-201ENST00000427686 607 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 SIRPG-AS1-201ENST00000437384 410 ntTSL 3 BASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 PPIAP10-201ENST00000438675 458 ntBASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 AL121580.1-201ENST00000449941 219 ntTSL 3 BASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 AC009948.1-203ENST00000450044 793 ntTSL 3 BASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 SSXP4-201ENST00000451349 245 ntBASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 ISCUP1-201ENST00000454451 448 ntBASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 LINC01789-202ENST00000455614 491 ntTSL 3 BASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 SNORD121B-201ENST00000458838 81 ntBASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 C1orf105-204ENST00000460397 462 ntTSL 3 BASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 RN7SL216P-201ENST00000471607 298 ntBASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 AC063943.2-201ENST00000495697 534 ntBASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 AC097716.1-201ENST00000509136 180 ntTSL 2 BASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 SNX18P23-201ENST00000510867 677 ntBASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 EGFLAM-211ENST00000514476 676 ntTSL 2 BASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 RNA5SP96-201ENST00000516041 107 ntBASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 AC107952.1-201ENST00000524200 376 ntBASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 AP004607.5-201ENST00000532034 217 ntBASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 AC004232.1-201ENST00000571388 208 ntBASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 AC090283.1-201ENST00000582101 265 ntTSL 3 BASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 MIR4293-201ENST00000584305 78 ntBASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 AL512652.1-201ENST00000619006 500 ntBASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 Metazoa_SRP.129-201ENST00000619776 251 ntBASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 SLC2A14-218ENST00000543909 4125 ntAPPRIS P3 TSL 1 (best) BASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 MAGEB10-202ENST00000614159 1389 ntAPPRIS P1 BASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 CHRM5-202ENST00000557872 2687 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 SAMMSON-226ENST00000642089 1582 ntBASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 KCNJ2-201ENST00000243457 5392 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 CCDC150P1-201ENST00000537123 2215 ntBASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 TMEM267-201ENST00000397080 2338 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 CLTC-210ENST00000579456 2301 ntTSL 5 BASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 AC004982.1-201ENST00000608770 1655 ntTSL 4 BASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 CACNA2D3-212ENST00000620722 3296 ntTSL 1 (best) BASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 DNAL1-202ENST00000553645 8404 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 NEGR1-202ENST00000357731 12811 ntAPPRIS P1 TSL 1 (best) BASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 PCNX4-201ENST00000317623 17339 ntAPPRIS P3 TSL 5 BASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC6.77□□□□□ -1.33
VPS9D1Q9Y2B5 STT3A-214ENST00000531491 2160 ntTSL 2 BASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 TAOK1-202ENST00000536202 4068 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 CYP19A1-202ENST00000396404 2388 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 PLCH1-206ENST00000494598 3525 ntTSL 5 BASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 SLF2-202ENST00000370269 3712 ntAPPRIS ALT2 TSL 1 (best) BASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 ZNF639-206ENST00000484866 1730 ntAPPRIS P1 TSL 2 BASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 MBNL1-204ENST00000324210 5465 ntAPPRIS ALT1 TSL 1 (best) BASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 GCSAML-210ENST00000536561 4063 ntAPPRIS P3 TSL 4 BASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 IFI16-203ENST00000359709 2609 ntAPPRIS ALT2 TSL 2 BASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 TMOD2-203ENST00000539962 3000 ntTSL 2 BASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 NR5A2-203ENST00000367362 5086 ntAPPRIS P3 TSL 1 (best) BASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 MYO5A-209ENST00000553916 5989 ntTSL 5 BASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 LINC02384-201ENST00000360485 471 ntTSL 5 BASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 RNU6-700P-201ENST00000391043 107 ntBASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 FABP6-202ENST00000402432 572 ntAPPRIS P1 TSL 1 (best) BASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 U3.42-201ENST00000408746 214 ntBASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 RN7SKP117-201ENST00000410175 264 ntBASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 AC009518.1-202ENST00000415393 1229 ntTSL 2 BASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 VTI1BP4-201ENST00000427516 527 ntBASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 AC239367.3-201ENST00000428996 814 ntBASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 AC005160.1-201ENST00000432405 381 ntTSL 3 BASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 AC005094.1-201ENST00000440420 368 ntBASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 AC005517.1-201ENST00000452091 489 ntBASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 FABP5P13-201ENST00000452144 328 ntBASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 AL450345.1-201ENST00000456118 311 ntTSL 3 BASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 AL390730.1-201ENST00000457106 692 ntTSL 2 BASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 AP001324.2-201ENST00000461163 319 ntBASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 TUBBP11-201ENST00000472255 252 ntBASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 RPS16P9-201ENST00000477220 427 ntBASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 RN7SL654P-201ENST00000479178 292 ntBASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 MDM4-213ENST00000507825 481 ntTSL 1 (best) BASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 TRAPPC2P7-201ENST00000509650 231 ntBASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 AC007016.1-201ENST00000512110 244 ntBASIC6.76□□□□□ -1.33
VPS9D1Q9Y2B5 AC005798.1-201ENST00000513715 387 ntBASIC6.76□□□□□ -1.33
Retrieved 100 of 98,524 protein–RNA pairs in 98.8 ms