Protein–RNA interactions for Protein: Q9Y252

RNF6, E3 ubiquitin-protein ligase RNF6, humanhuman

Predictions only

Length 685 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6Q9Y252 CRYBB2P1-203ENST00000415709 538 ntBASIC3.57□□□□□ -1.84
RNF6Q9Y252 AC008280.1-201ENST00000418851 412 ntBASIC3.57□□□□□ -1.84
RNF6Q9Y252 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC3.57□□□□□ -1.84
RNF6Q9Y252 AC002075.2-201ENST00000425207 252 ntBASIC3.57□□□□□ -1.84
RNF6Q9Y252 RPP40P1-201ENST00000426762 456 ntBASIC3.57□□□□□ -1.84
RNF6Q9Y252 MTND5P3-201ENST00000438536 1800 ntBASIC3.57□□□□□ -1.84
RNF6Q9Y252 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.57□□□□□ -1.84
RNF6Q9Y252 RPS26P56-201ENST00000444468 240 ntBASIC3.57□□□□□ -1.84
RNF6Q9Y252 AL590399.6-201ENST00000446396 307 ntBASIC3.57□□□□□ -1.84
RNF6Q9Y252 RAB9AP1-201ENST00000449393 573 ntBASIC3.57□□□□□ -1.84
RNF6Q9Y252 RPS11P1-201ENST00000451072 473 ntBASIC3.57□□□□□ -1.84
RNF6Q9Y252 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.57□□□□□ -1.84
RNF6Q9Y252 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.57□□□□□ -1.84
RNF6Q9Y252 HMGB3P30-201ENST00000457863 606 ntBASIC3.57□□□□□ -1.84
RNF6Q9Y252 AC146507.1-201ENST00000468335 354 ntBASIC3.57□□□□□ -1.84
RNF6Q9Y252 RN7SL323P-201ENST00000494712 295 ntBASIC3.57□□□□□ -1.84
RNF6Q9Y252 CEP170P1-201ENST00000502249 4587 ntBASIC3.57□□□□□ -1.84
RNF6Q9Y252 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.57□□□□□ -1.84
RNF6Q9Y252 AC109471.1-201ENST00000511631 612 ntBASIC3.57□□□□□ -1.84
RNF6Q9Y252 RNU6-1231P-201ENST00000517185 103 ntBASIC3.57□□□□□ -1.84
RNF6Q9Y252 RNU4-60P-201ENST00000517239 135 ntBASIC3.57□□□□□ -1.84
RNF6Q9Y252 FBXO3-210ENST00000532057 918 ntTSL 2 BASIC3.57□□□□□ -1.84
RNF6Q9Y252 AC011773.3-201ENST00000546501 589 ntTSL 3 BASIC3.57□□□□□ -1.84
RNF6Q9Y252 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.57□□□□□ -1.84
RNF6Q9Y252 KTN1-223ENST00000555573 1712 ntTSL 2 BASIC3.57□□□□□ -1.84
RNF6Q9Y252 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.57□□□□□ -1.84
RNF6Q9Y252 STARD13-AS-208ENST00000589472 859 ntTSL 5 BASIC3.57□□□□□ -1.84
RNF6Q9Y252 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC3.57□□□□□ -1.84
RNF6Q9Y252 HMGN2P28-201ENST00000606102 262 ntBASIC3.57□□□□□ -1.84
RNF6Q9Y252 AC019080.3-201ENST00000606180 444 ntTSL 5 BASIC3.57□□□□□ -1.84
RNF6Q9Y252 SNORA51-201ENST00000606420 132 ntBASIC3.57□□□□□ -1.84
RNF6Q9Y252 VN1R74P-201ENST00000613259 503 ntBASIC3.57□□□□□ -1.84
RNF6Q9Y252 AC093875.1-201ENST00000623688 504 ntBASIC3.57□□□□□ -1.84
RNF6Q9Y252 PRO1804-201ENST00000623780 2050 ntBASIC3.57□□□□□ -1.84
RNF6Q9Y252 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC3.57□□□□□ -1.84
RNF6Q9Y252 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.57□□□□□ -1.84
RNF6Q9Y252 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC3.56□□□□□ -1.84
RNF6Q9Y252 AC087521.2-201ENST00000499066 2190 ntTSL 2 BASIC3.56□□□□□ -1.84
RNF6Q9Y252 AC011978.2-201ENST00000569835 2054 ntBASIC3.56□□□□□ -1.84
RNF6Q9Y252 LIG4-201ENST00000356922 4096 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RNF6Q9Y252 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
RNF6Q9Y252 ABCD2-201ENST00000308666 6238 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
RNF6Q9Y252 AL592494.2-201ENST00000425455 1548 ntBASIC3.56□□□□□ -1.84
RNF6Q9Y252 CEP170-215ENST00000481987 3031 ntTSL 5 BASIC3.56□□□□□ -1.84
RNF6Q9Y252 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.56□□□□□ -1.84
RNF6Q9Y252 SGO1P1-201ENST00000603525 1447 ntBASIC3.56□□□□□ -1.84
RNF6Q9Y252 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.56□□□□□ -1.84
RNF6Q9Y252 CNOT4-202ENST00000356162 2594 ntTSL 5 BASIC3.56□□□□□ -1.84
RNF6Q9Y252 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
RNF6Q9Y252 RNU5B-1-201ENST00000363286 116 ntBASIC3.56□□□□□ -1.84
RNF6Q9Y252 OR1L1-202ENST00000373686 1083 ntBASIC3.56□□□□□ -1.84
RNF6Q9Y252 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.56□□□□□ -1.84
RNF6Q9Y252 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.56□□□□□ -1.84
RNF6Q9Y252 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC3.56□□□□□ -1.84
RNF6Q9Y252 HIGD1AP4-201ENST00000430194 280 ntBASIC3.56□□□□□ -1.84
RNF6Q9Y252 AC000041.1-201ENST00000439655 175 ntBASIC3.56□□□□□ -1.84
RNF6Q9Y252 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.56□□□□□ -1.84
RNF6Q9Y252 RANP8-201ENST00000444720 713 ntBASIC3.56□□□□□ -1.84
RNF6Q9Y252 RPL7P59-201ENST00000447700 943 ntBASIC3.56□□□□□ -1.84
RNF6Q9Y252 AL050341.1-201ENST00000447743 313 ntBASIC3.56□□□□□ -1.84
RNF6Q9Y252 HMGN1P5-201ENST00000448591 263 ntBASIC3.56□□□□□ -1.84
RNF6Q9Y252 AC098824.1-201ENST00000453565 980 ntBASIC3.56□□□□□ -1.84
RNF6Q9Y252 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.56□□□□□ -1.84
RNF6Q9Y252 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC3.56□□□□□ -1.84
RNF6Q9Y252 AP000893.1-201ENST00000474462 794 ntBASIC3.56□□□□□ -1.84
RNF6Q9Y252 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RNF6Q9Y252 HMGN1P15-201ENST00000513870 295 ntBASIC3.56□□□□□ -1.84
RNF6Q9Y252 RN7SKP157-201ENST00000516174 282 ntBASIC3.56□□□□□ -1.84
RNF6Q9Y252 PKIA-AS1-203ENST00000522807 692 ntTSL 3 BASIC3.56□□□□□ -1.84
RNF6Q9Y252 THEM7P-202ENST00000525689 764 ntTSL 3 BASIC3.56□□□□□ -1.84
RNF6Q9Y252 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.56□□□□□ -1.84
RNF6Q9Y252 MRPL51-207ENST00000543959 472 ntTSL 3 BASIC3.56□□□□□ -1.84
RNF6Q9Y252 CYCSP30-201ENST00000546447 172 ntBASIC3.56□□□□□ -1.84
RNF6Q9Y252 AC091516.1-201ENST00000549191 703 ntBASIC3.56□□□□□ -1.84
RNF6Q9Y252 ITFG1-AS1-202ENST00000565694 494 ntTSL 2 BASIC3.56□□□□□ -1.84
RNF6Q9Y252 AC015726.1-201ENST00000602353 681 ntBASIC3.56□□□□□ -1.84
RNF6Q9Y252 RNA5SP108-201ENST00000605921 117 ntBASIC3.56□□□□□ -1.84
RNF6Q9Y252 RNVU1-4-201ENST00000612985 164 ntBASIC3.56□□□□□ -1.84
RNF6Q9Y252 AC008759.3-201ENST00000613300 508 ntBASIC3.56□□□□□ -1.84
RNF6Q9Y252 AC022079.2-201ENST00000619739 566 ntBASIC3.56□□□□□ -1.84
RNF6Q9Y252 AL139089.1-201ENST00000620372 975 ntBASIC3.56□□□□□ -1.84
RNF6Q9Y252 FP236240.3-201ENST00000623061 327 ntBASIC3.56□□□□□ -1.84
RNF6Q9Y252 AC004943.3-201ENST00000624116 600 ntBASIC3.56□□□□□ -1.84
RNF6Q9Y252 TEX41-300ENST00000631048 69 ntTSL 5 BASIC3.56□□□□□ -1.84
RNF6Q9Y252 OR6C71P-202ENST00000641886 1107 ntBASIC3.56□□□□□ -1.84
RNF6Q9Y252 BX649567.1-201ENST00000642071 1134 ntBASIC3.56□□□□□ -1.84
RNF6Q9Y252 LRMP-201ENST00000354454 2504 ntAPPRIS P2 TSL 1 (best) BASIC3.56□□□□□ -1.84
RNF6Q9Y252 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.56□□□□□ -1.84
RNF6Q9Y252 NR5A2-201ENST00000236914 3115 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RNF6Q9Y252 IQCG-205ENST00000455191 1981 ntAPPRIS P1 TSL 2 BASIC3.56□□□□□ -1.84
RNF6Q9Y252 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
RNF6Q9Y252 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RNF6Q9Y252 TMEM161BP1-201ENST00000457388 1457 ntBASIC3.55□□□□□ -1.84
RNF6Q9Y252 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.55□□□□□ -1.84
RNF6Q9Y252 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
RNF6Q9Y252 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
RNF6Q9Y252 KCNJ16-203ENST00000392671 3981 ntAPPRIS P1 TSL 2 BASIC3.55□□□□□ -1.84
RNF6Q9Y252 AL136520.1-201ENST00000600311 1322 ntBASIC3.55□□□□□ -1.84
RNF6Q9Y252 MMS22L-202ENST00000369251 3949 ntTSL 2 BASIC3.55□□□□□ -1.84
RNF6Q9Y252 OFD1P5Y-201ENST00000447585 2590 ntBASIC3.55□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 83 ms