Protein–RNA interactions for Protein: Q9NP79

VTA1, Vacuolar protein sorting-associated protein VTA1 homolog, humanhuman

Predictions only

Length 307 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1Q9NP79 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC5.24□□□□□ -1.57
VTA1Q9NP79 CARF-203ENST00000414439 2099 ntTSL 2 BASIC5.24□□□□□ -1.57
VTA1Q9NP79 PLEKHG7-201ENST00000344636 3868 ntTSL 5 BASIC5.23□□□□□ -1.57
VTA1Q9NP79 XIRP2-203ENST00000409195 12675 ntTSL 5 BASIC5.23□□□□□ -1.57
VTA1Q9NP79 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VTA1Q9NP79 AL356473.1-201ENST00000406203 1408 ntBASIC5.23□□□□□ -1.57
VTA1Q9NP79 PABPC1P9-201ENST00000426076 1612 ntBASIC5.23□□□□□ -1.57
VTA1Q9NP79 AC114546.3-201ENST00000623582 1734 ntBASIC5.23□□□□□ -1.57
VTA1Q9NP79 ZNF468-203ENST00000595646 4407 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VTA1Q9NP79 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
VTA1Q9NP79 PCDH15-206ENST00000373965 9237 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
VTA1Q9NP79 AC009951.1-201ENST00000623674 2614 ntBASIC5.23□□□□□ -1.57
VTA1Q9NP79 OBSCN-214ENST00000636875 23907 ntTSL 5 BASIC5.23□□□□□ -1.57
VTA1Q9NP79 LY96-201ENST00000284818 607 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VTA1Q9NP79 CXCL10-201ENST00000306602 1176 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VTA1Q9NP79 RNU6-1243P-201ENST00000364028 107 ntBASIC5.23□□□□□ -1.57
VTA1Q9NP79 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC5.23□□□□□ -1.57
VTA1Q9NP79 ARL4AP5-201ENST00000404372 599 ntBASIC5.23□□□□□ -1.57
VTA1Q9NP79 AP000580.1-201ENST00000404439 358 ntBASIC5.23□□□□□ -1.57
VTA1Q9NP79 AL024474.1-201ENST00000404655 591 ntBASIC5.23□□□□□ -1.57
VTA1Q9NP79 AL512430.2-201ENST00000406786 339 ntBASIC5.23□□□□□ -1.57
VTA1Q9NP79 FGF12-AS1-201ENST00000414920 580 ntTSL 4 BASIC5.23□□□□□ -1.57
VTA1Q9NP79 EBLN1-201ENST00000422359 1208 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
VTA1Q9NP79 RPL7AP25-201ENST00000423357 805 ntBASIC5.23□□□□□ -1.57
VTA1Q9NP79 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC5.23□□□□□ -1.57
VTA1Q9NP79 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VTA1Q9NP79 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC5.23□□□□□ -1.57
VTA1Q9NP79 PAXBP1P1-201ENST00000449315 447 ntBASIC5.23□□□□□ -1.57
VTA1Q9NP79 MTCYBP1-201ENST00000454315 1119 ntBASIC5.23□□□□□ -1.57
VTA1Q9NP79 snoU13.7-201ENST00000459220 104 ntBASIC5.23□□□□□ -1.57
VTA1Q9NP79 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VTA1Q9NP79 NCOR1P1-201ENST00000478176 406 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VTA1Q9NP79 AC090453.1-201ENST00000495560 436 ntBASIC5.23□□□□□ -1.57
VTA1Q9NP79 AC016687.2-203ENST00000506650 578 ntTSL 3 BASIC5.23□□□□□ -1.57
VTA1Q9NP79 ARL2BPP4-201ENST00000506854 471 ntBASIC5.23□□□□□ -1.57
VTA1Q9NP79 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC5.23□□□□□ -1.57
VTA1Q9NP79 AC109458.1-201ENST00000508858 316 ntBASIC5.23□□□□□ -1.57
VTA1Q9NP79 LINC02272-202ENST00000511399 607 ntTSL 2 BASIC5.23□□□□□ -1.57
VTA1Q9NP79 LINC02100-201ENST00000512978 238 ntTSL 3 BASIC5.23□□□□□ -1.57
VTA1Q9NP79 AC022447.1-201ENST00000515358 464 ntBASIC5.23□□□□□ -1.57
VTA1Q9NP79 AL035078.3-201ENST00000525382 241 ntTSL 3 BASIC5.23□□□□□ -1.57
VTA1Q9NP79 AP000827.1-201ENST00000527814 258 ntBASIC5.23□□□□□ -1.57
VTA1Q9NP79 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC5.23□□□□□ -1.57
VTA1Q9NP79 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.23□□□□□ -1.57
VTA1Q9NP79 GTF2IP22-201ENST00000554443 182 ntBASIC5.23□□□□□ -1.57
VTA1Q9NP79 AC091489.2-201ENST00000566263 604 ntBASIC5.23□□□□□ -1.57
VTA1Q9NP79 AC023575.1-201ENST00000580510 358 ntBASIC5.23□□□□□ -1.57
VTA1Q9NP79 AC012593.1-213ENST00000587255 510 ntTSL 5 BASIC5.23□□□□□ -1.57
VTA1Q9NP79 AC087683.1-201ENST00000591187 441 ntBASIC5.23□□□□□ -1.57
VTA1Q9NP79 DTNA-232ENST00000599844 853 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VTA1Q9NP79 MIR99AHG-211ENST00000602323 475 ntTSL 5 BASIC5.23□□□□□ -1.57
VTA1Q9NP79 AP000403.1-201ENST00000603349 851 ntBASIC5.23□□□□□ -1.57
VTA1Q9NP79 AC010678.1-201ENST00000614118 713 ntBASIC5.23□□□□□ -1.57
VTA1Q9NP79 AC068792.1-201ENST00000621354 417 ntBASIC5.23□□□□□ -1.57
VTA1Q9NP79 AC015908.5-201ENST00000623289 343 ntBASIC5.23□□□□□ -1.57
VTA1Q9NP79 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC5.23□□□□□ -1.57
VTA1Q9NP79 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VTA1Q9NP79 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
VTA1Q9NP79 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.23□□□□□ -1.57
VTA1Q9NP79 EPHA3-202ENST00000452448 2546 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
VTA1Q9NP79 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC5.23□□□□□ -1.57
VTA1Q9NP79 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC5.23□□□□□ -1.57
VTA1Q9NP79 GDI2P1-201ENST00000429312 1336 ntBASIC5.23□□□□□ -1.57
VTA1Q9NP79 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC5.23□□□□□ -1.57
VTA1Q9NP79 AL136164.3-201ENST00000624429 3978 ntBASIC5.23□□□□□ -1.57
VTA1Q9NP79 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC5.22□□□□□ -1.57
VTA1Q9NP79 SCN11A-203ENST00000456224 5262 ntAPPRIS ALT2 TSL 5 BASIC5.22□□□□□ -1.57
VTA1Q9NP79 BTBD10P1-201ENST00000549824 1352 ntBASIC5.22□□□□□ -1.57
VTA1Q9NP79 RPL23AP57-201ENST00000332361 466 ntBASIC5.22□□□□□ -1.57
VTA1Q9NP79 RN7SKP227-201ENST00000364445 330 ntBASIC5.22□□□□□ -1.57
VTA1Q9NP79 RNU6-1042P-201ENST00000384204 107 ntBASIC5.22□□□□□ -1.57
VTA1Q9NP79 RNU6-1119P-201ENST00000384349 108 ntBASIC5.22□□□□□ -1.57
VTA1Q9NP79 OR6C69P-201ENST00000394268 893 ntBASIC5.22□□□□□ -1.57
VTA1Q9NP79 AC025750.1-201ENST00000399891 379 ntBASIC5.22□□□□□ -1.57
VTA1Q9NP79 U3.35-201ENST00000408405 208 ntBASIC5.22□□□□□ -1.57
VTA1Q9NP79 AC069218.2-201ENST00000411665 344 ntBASIC5.22□□□□□ -1.57
VTA1Q9NP79 FNDC3CP-201ENST00000420795 1155 ntBASIC5.22□□□□□ -1.57
VTA1Q9NP79 RGS17P1-201ENST00000423358 553 ntBASIC5.22□□□□□ -1.57
VTA1Q9NP79 SLC44A3-AS1-205ENST00000424505 612 ntBASIC5.22□□□□□ -1.57
VTA1Q9NP79 REG1CP-203ENST00000434852 460 ntTSL 4 BASIC5.22□□□□□ -1.57
VTA1Q9NP79 RPL37P21-201ENST00000435890 276 ntBASIC5.22□□□□□ -1.57
VTA1Q9NP79 LINC01754-201ENST00000437920 750 ntTSL 3 BASIC5.22□□□□□ -1.57
VTA1Q9NP79 DOCK9-AS1-201ENST00000439367 392 ntTSL 3 BASIC5.22□□□□□ -1.57
VTA1Q9NP79 EEF1E1P1-201ENST00000446998 430 ntBASIC5.22□□□□□ -1.57
VTA1Q9NP79 AC009963.2-201ENST00000453431 138 ntBASIC5.22□□□□□ -1.57
VTA1Q9NP79 AC010618.1-201ENST00000469924 477 ntBASIC5.22□□□□□ -1.57
VTA1Q9NP79 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC5.22□□□□□ -1.57
VTA1Q9NP79 AC108752.1-203ENST00000496674 339 ntTSL 5 BASIC5.22□□□□□ -1.57
VTA1Q9NP79 AC092608.1-201ENST00000503505 267 ntTSL 2 BASIC5.22□□□□□ -1.57
VTA1Q9NP79 LINC01957-201ENST00000506392 751 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
VTA1Q9NP79 AC022447.3-201ENST00000506865 495 ntBASIC5.22□□□□□ -1.57
VTA1Q9NP79 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC5.22□□□□□ -1.57
VTA1Q9NP79 AC104986.1-201ENST00000517978 436 ntBASIC5.22□□□□□ -1.57
VTA1Q9NP79 AC104233.2-201ENST00000518922 414 ntTSL 3 BASIC5.22□□□□□ -1.57
VTA1Q9NP79 AP001330.2-201ENST00000523121 979 ntTSL 2 BASIC5.22□□□□□ -1.57
VTA1Q9NP79 AC079098.1-202ENST00000523150 573 ntTSL 5 BASIC5.22□□□□□ -1.57
VTA1Q9NP79 AC024909.1-201ENST00000549278 599 ntTSL 4 BASIC5.22□□□□□ -1.57
VTA1Q9NP79 AC107023.1-201ENST00000552757 356 ntTSL 5 BASIC5.22□□□□□ -1.57
VTA1Q9NP79 AGGF1P8-201ENST00000562979 1000 ntBASIC5.22□□□□□ -1.57
VTA1Q9NP79 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC5.22□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 92.2 ms