Protein–RNA interactions for Protein: Q9H9A6

LRRC40, Leucine-rich repeat-containing protein 40, humanhuman

Predictions only

Length 602 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC40Q9H9A6 ERBIN-212ENST00000508515 4374 ntTSL 5 BASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 OR8D1-201ENST00000357821 1026 ntAPPRIS P1 BASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 RNU6-650P-201ENST00000365658 111 ntBASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 RNU6-444P-201ENST00000383988 108 ntBASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 RNU6-629P-201ENST00000384061 103 ntBASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 FABP12P1-201ENST00000401911 322 ntBASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 AL136116.1-201ENST00000403591 381 ntBASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 SFR1P1-201ENST00000403720 688 ntBASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 AP000567.1-201ENST00000406413 156 ntBASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 GCG-202ENST00000418842 1289 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 AL590103.1-201ENST00000434488 307 ntBASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 AL157359.2-201ENST00000440372 784 ntTSL 3 BASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 ACTG1P13-201ENST00000486987 1043 ntBASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 PRELID3BP5-201ENST00000508612 460 ntBASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 TMPRSS11BNL-205ENST00000514295 1262 ntBASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 AC104057.1-201ENST00000515547 497 ntBASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 RNU2-27P-201ENST00000516185 142 ntBASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 AC104229.1-201ENST00000561364 255 ntBASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 LINC00557-201ENST00000563184 1279 ntBASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 AL133383.1-201ENST00000569292 901 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 MIR5047-201ENST00000579212 100 ntBASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 AC025682.1-201ENST00000582389 437 ntTSL 5 BASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 RNVU1-4-201ENST00000612985 164 ntBASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 AC069209.1-201ENST00000619282 651 ntBASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 AC068831.8-201ENST00000620171 435 ntBASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 AP003355.3-201ENST00000623465 114 ntBASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 AC132825.7-201ENST00000638744 335 ntBASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 AC097512.1-201ENST00000511453 1309 ntTSL 3 BASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 MFSD8-213ENST00000641134 1327 ntBASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 CPB2-201ENST00000181383 1717 ntAPPRIS P1 TSL 1 (best) BASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 PWAR6-201ENST00000552334 4618 ntBASIC3.64□□□□□ -1.83
LRRC40Q9H9A6 MTCO1P6-201ENST00000481192 1384 ntBASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 AC025263.3-201ENST00000622965 1396 ntBASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 WDR49-201ENST00000308378 2594 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 RNU6-263P-201ENST00000363811 107 ntBASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 RNA5SP515-201ENST00000364570 118 ntBASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 RNU6-1181P-201ENST00000384191 106 ntBASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 U8.11-201ENST00000384699 133 ntBASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 U8.12-201ENST00000384701 133 ntBASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 AC007066.1-201ENST00000392902 381 ntBASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 RNU2-71P-201ENST00000411395 189 ntBASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 AL138760.1-201ENST00000423283 435 ntTSL 3 BASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 AC114973.1-201ENST00000429057 632 ntBASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 ELOCP3-201ENST00000439303 348 ntBASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 HMGN2P16-201ENST00000456802 261 ntBASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 U8.18-201ENST00000459285 133 ntBASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 AC023598.1-201ENST00000472521 361 ntBASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 AC084357.1-201ENST00000473404 255 ntBASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 AL049830.2-201ENST00000480072 201 ntBASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 HMGN1P11-201ENST00000508668 303 ntBASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 SETP12-201ENST00000514068 805 ntBASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 AP006245.1-201ENST00000522549 120 ntBASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 AP001207.1-201ENST00000524051 481 ntBASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 AL353699.1-201ENST00000529078 365 ntTSL 3 BASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 AC109635.4-202ENST00000531666 412 ntBASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 OSBPL9P3-201ENST00000534523 595 ntBASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 AC113368.1-201ENST00000603736 382 ntBASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 AC024941.1-201ENST00000612250 334 ntBASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 AC092184.1-201ENST00000625042 715 ntBASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 ZNF734P-201ENST00000419494 1534 ntBASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 AC068647.1-201ENST00000489539 2265 ntBASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 AC007256.1-201ENST00000392253 2765 ntBASIC3.63□□□□□ -1.83
LRRC40Q9H9A6 SAMD3-214ENST00000532763 3690 ntTSL 5 BASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 DPPA3-201ENST00000345088 1079 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 SNORD56.4-201ENST00000363883 71 ntBASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 RN7SKP280-201ENST00000364196 304 ntBASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 CRP-203ENST00000368111 512 ntTSL 3 BASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 Y_RNA.493-201ENST00000384422 102 ntBASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 FBXO11-203ENST00000405808 299 ntTSL 5 BASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 RNU6-77P-201ENST00000410554 91 ntBASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 RNU4-78P-201ENST00000410940 126 ntBASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 ATP5A1P2-201ENST00000412323 255 ntBASIC3.62□□□□□ -1.83
LRRC40Q9H9A6 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.62□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 122.5 ms