Protein–RNA interactions for Protein: Q9H0S4

DDX47, Probable ATP-dependent RNA helicase DDX47, humanhuman

Known RBP Predictions only

Length 455 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX47Q9H0S4 ACTG1P13-201ENST00000486987 1043 ntBASIC3.81□□□□□ -1.8
DDX47Q9H0S4 AC016550.1-201ENST00000505348 785 ntBASIC3.81□□□□□ -1.8
DDX47Q9H0S4 AC024587.2-201ENST00000509458 805 ntTSL 3 BASIC3.81□□□□□ -1.8
DDX47Q9H0S4 IL7R-208ENST00000511982 612 ntTSL 2 BASIC3.81□□□□□ -1.8
DDX47Q9H0S4 ARL2BPP6-201ENST00000512757 439 ntBASIC3.81□□□□□ -1.8
DDX47Q9H0S4 RNA5SP164-201ENST00000516533 110 ntBASIC3.81□□□□□ -1.8
DDX47Q9H0S4 IGKV2D-36-201ENST00000518643 226 ntBASIC3.81□□□□□ -1.8
DDX47Q9H0S4 AC011586.1-201ENST00000521055 458 ntTSL 3 BASIC3.81□□□□□ -1.8
DDX47Q9H0S4 AP001207.1-201ENST00000524051 481 ntBASIC3.81□□□□□ -1.8
DDX47Q9H0S4 MS4A1-205ENST00000528313 928 ntTSL 2 BASIC3.81□□□□□ -1.8
DDX47Q9H0S4 AP003066.2-201ENST00000529375 555 ntBASIC3.81□□□□□ -1.8
DDX47Q9H0S4 AP000777.1-201ENST00000541495 355 ntTSL 3 BASIC3.81□□□□□ -1.8
DDX47Q9H0S4 AC092470.1-201ENST00000546187 132 ntBASIC3.81□□□□□ -1.8
DDX47Q9H0S4 UTS2-201ENST00000054668 420 ntAPPRIS P4 TSL 1 (best) BASIC3.81□□□□□ -1.8
DDX47Q9H0S4 AL121766.1-201ENST00000547436 487 ntBASIC3.81□□□□□ -1.8
DDX47Q9H0S4 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
DDX47Q9H0S4 AC025884.1-201ENST00000556034 378 ntBASIC3.81□□□□□ -1.8
DDX47Q9H0S4 FRMD6-AS2-202ENST00000557625 581 ntTSL 4 BASIC3.81□□□□□ -1.8
DDX47Q9H0S4 ZNF971P-201ENST00000562068 1249 ntBASIC3.81□□□□□ -1.8
DDX47Q9H0S4 AC023825.1-201ENST00000566704 1030 ntBASIC3.81□□□□□ -1.8
DDX47Q9H0S4 AC074051.3-201ENST00000570238 358 ntBASIC3.81□□□□□ -1.8
DDX47Q9H0S4 AC005412.1-201ENST00000580812 1049 ntBASIC3.81□□□□□ -1.8
DDX47Q9H0S4 AC103987.2-201ENST00000583436 417 ntTSL 2 BASIC3.81□□□□□ -1.8
DDX47Q9H0S4 LINC01791-201ENST00000589511 677 ntTSL 5 BASIC3.81□□□□□ -1.8
DDX47Q9H0S4 RPAP2P1-201ENST00000603626 1168 ntBASIC3.81□□□□□ -1.8
DDX47Q9H0S4 AL049634.3-201ENST00000604968 457 ntBASIC3.81□□□□□ -1.8
DDX47Q9H0S4 AL365503.1-201ENST00000605247 905 ntBASIC3.81□□□□□ -1.8
DDX47Q9H0S4 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.81□□□□□ -1.8
DDX47Q9H0S4 AC023043.4-201ENST00000612081 449 ntBASIC3.81□□□□□ -1.8
DDX47Q9H0S4 VN1R74P-201ENST00000613259 503 ntBASIC3.81□□□□□ -1.8
DDX47Q9H0S4 AC008121.2-201ENST00000614647 523 ntBASIC3.81□□□□□ -1.8
DDX47Q9H0S4 AC098679.5-201ENST00000624394 571 ntBASIC3.81□□□□□ -1.8
DDX47Q9H0S4 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.81□□□□□ -1.8
DDX47Q9H0S4 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC3.81□□□□□ -1.8
DDX47Q9H0S4 AC139713.2-210ENST00000641741 992 ntBASIC3.81□□□□□ -1.8
DDX47Q9H0S4 ALG6-201ENST00000263440 1895 ntAPPRIS ALT1 TSL 5 BASIC3.81□□□□□ -1.8
DDX47Q9H0S4 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC3.8□□□□□ -1.8
DDX47Q9H0S4 RNFT1-201ENST00000305783 2101 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
DDX47Q9H0S4 CLIC2-202ENST00000369449 2655 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
DDX47Q9H0S4 AC117529.2-201ENST00000512159 2068 ntBASIC3.8□□□□□ -1.8
DDX47Q9H0S4 RNF180-202ENST00000389100 4906 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
DDX47Q9H0S4 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC3.8□□□□□ -1.8
DDX47Q9H0S4 RPS4Y1-201ENST00000250784 1305 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
DDX47Q9H0S4 SNORA70C-201ENST00000384538 135 ntBASIC3.8□□□□□ -1.8
DDX47Q9H0S4 MCTS2P-201ENST00000394552 546 ntBASIC3.8□□□□□ -1.8
DDX47Q9H0S4 MTHFD2P2-201ENST00000407725 247 ntBASIC3.8□□□□□ -1.8
DDX47Q9H0S4 SLC8A1-AS1-201ENST00000413479 800 ntTSL 5 BASIC3.8□□□□□ -1.8
DDX47Q9H0S4 MTCYBP24-201ENST00000420387 1106 ntBASIC3.8□□□□□ -1.8
DDX47Q9H0S4 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC3.8□□□□□ -1.8
DDX47Q9H0S4 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.8□□□□□ -1.8
DDX47Q9H0S4 B3GNT2P1-201ENST00000434960 952 ntBASIC3.8□□□□□ -1.8
DDX47Q9H0S4 AC010157.1-201ENST00000440589 527 ntTSL 4 BASIC3.8□□□□□ -1.8
DDX47Q9H0S4 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC3.8□□□□□ -1.8
DDX47Q9H0S4 TVP23BP2-201ENST00000455082 615 ntBASIC3.8□□□□□ -1.8
DDX47Q9H0S4 AC004872.1-201ENST00000456062 469 ntTSL 3 BASIC3.8□□□□□ -1.8
DDX47Q9H0S4 AL136097.1-201ENST00000456945 913 ntBASIC3.8□□□□□ -1.8
DDX47Q9H0S4 UBDP1-202ENST00000457888 382 ntBASIC3.8□□□□□ -1.8
DDX47Q9H0S4 AC022034.3-201ENST00000471393 478 ntBASIC3.8□□□□□ -1.8
DDX47Q9H0S4 MGAT4A-209ENST00000495056 683 ntTSL 2 BASIC3.8□□□□□ -1.8
DDX47Q9H0S4 AC078918.1-201ENST00000498515 228 ntBASIC3.8□□□□□ -1.8
DDX47Q9H0S4 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.8□□□□□ -1.8
DDX47Q9H0S4 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.8□□□□□ -1.8
DDX47Q9H0S4 AC027018.1-201ENST00000533978 396 ntTSL 4 BASIC3.8□□□□□ -1.8
DDX47Q9H0S4 LINC00519-201ENST00000557518 682 ntTSL 2 BASIC3.8□□□□□ -1.8
DDX47Q9H0S4 ZFAND6-204ENST00000558087 909 ntAPPRIS P1 TSL 5 BASIC3.8□□□□□ -1.8
DDX47Q9H0S4 AC010735.1-201ENST00000567305 1026 ntBASIC3.8□□□□□ -1.8
DDX47Q9H0S4 AC010928.3-201ENST00000587712 541 ntBASIC3.8□□□□□ -1.8
DDX47Q9H0S4 AC004542.1-201ENST00000602955 264 ntTSL 3 BASIC3.8□□□□□ -1.8
DDX47Q9H0S4 AL591034.3-201ENST00000605511 685 ntBASIC3.8□□□□□ -1.8
DDX47Q9H0S4 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC3.8□□□□□ -1.8
DDX47Q9H0S4 VN1R7P-201ENST00000619242 903 ntBASIC3.8□□□□□ -1.8
DDX47Q9H0S4 NRDE2-210ENST00000628832 132 ntTSL 5 BASIC3.8□□□□□ -1.8
DDX47Q9H0S4 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.8□□□□□ -1.8
DDX47Q9H0S4 AL353746.1-201ENST00000566293 6881 ntBASIC3.8□□□□□ -1.8
DDX47Q9H0S4 AL592494.2-201ENST00000425455 1548 ntBASIC3.8□□□□□ -1.8
DDX47Q9H0S4 KIF21A-203ENST00000541463 4866 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
DDX47Q9H0S4 DOCK7-218ENST00000635123 6297 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
DDX47Q9H0S4 CKAP5-201ENST00000312055 6532 ntTSL 5 BASIC3.79□□□□□ -1.8
DDX47Q9H0S4 USH2A-202ENST00000366942 6320 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
DDX47Q9H0S4 AL355578.1-201ENST00000607405 1328 ntBASIC3.79□□□□□ -1.8
DDX47Q9H0S4 AC090337.1-201ENST00000579651 2074 ntBASIC3.79□□□□□ -1.8
DDX47Q9H0S4 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
DDX47Q9H0S4 RNU1-85P-201ENST00000364127 164 ntBASIC3.79□□□□□ -1.8
DDX47Q9H0S4 RNU6-374P-201ENST00000364146 108 ntBASIC3.79□□□□□ -1.8
DDX47Q9H0S4 AC234772.1-201ENST00000377927 937 ntBASIC3.79□□□□□ -1.8
DDX47Q9H0S4 HIGD1C-201ENST00000398455 371 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
DDX47Q9H0S4 AL590704.1-201ENST00000402856 794 ntBASIC3.79□□□□□ -1.8
DDX47Q9H0S4 UQCRFS1P3-201ENST00000407697 385 ntBASIC3.79□□□□□ -1.8
DDX47Q9H0S4 MIR1250-201ENST00000408098 113 ntBASIC3.79□□□□□ -1.8
DDX47Q9H0S4 AL024507.1-201ENST00000412741 274 ntBASIC3.79□□□□□ -1.8
DDX47Q9H0S4 AC027644.1-201ENST00000419595 298 ntBASIC3.79□□□□□ -1.8
DDX47Q9H0S4 HRH4-202ENST00000426880 909 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
DDX47Q9H0S4 AC011897.1-201ENST00000450715 346 ntTSL 3 BASIC3.79□□□□□ -1.8
DDX47Q9H0S4 SNAP25-AS1-204ENST00000451151 867 ntTSL 2 BASIC3.79□□□□□ -1.8
DDX47Q9H0S4 OR9M1P-201ENST00000459641 921 ntBASIC3.79□□□□□ -1.8
DDX47Q9H0S4 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC3.79□□□□□ -1.8
DDX47Q9H0S4 AC026414.1-201ENST00000504046 698 ntBASIC3.79□□□□□ -1.8
DDX47Q9H0S4 PRELID3BP5-201ENST00000508612 460 ntBASIC3.79□□□□□ -1.8
DDX47Q9H0S4 AC048346.1-201ENST00000510247 144 ntBASIC3.79□□□□□ -1.8
DDX47Q9H0S4 LINC02112-202ENST00000512976 464 ntTSL 3 BASIC3.79□□□□□ -1.8
Retrieved 100 of 98,524 protein–RNA pairs in 79 ms