Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 AL358335.2-201ENST00000555693 487 ntTSL 3 BASIC3.9□□□□□ -1.79
UPF3BQ9BZI7 LARP7P3-201ENST00000579888 337 ntBASIC3.9□□□□□ -1.79
UPF3BQ9BZI7 MTCO3P22-201ENST00000603219 784 ntBASIC3.9□□□□□ -1.79
UPF3BQ9BZI7 AP003072.4-201ENST00000624580 310 ntBASIC3.9□□□□□ -1.79
UPF3BQ9BZI7 AC233263.6-201ENST00000631132 1963 ntBASIC3.9□□□□□ -1.79
UPF3BQ9BZI7 HSP90AA5P-201ENST00000438353 2192 ntBASIC3.9□□□□□ -1.79
UPF3BQ9BZI7 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
UPF3BQ9BZI7 AF117829.1-206ENST00000621883 3802 ntBASIC3.9□□□□□ -1.79
UPF3BQ9BZI7 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC3.89□□□□□ -1.79
UPF3BQ9BZI7 SRP72P2-201ENST00000344851 1979 ntBASIC3.89□□□□□ -1.79
UPF3BQ9BZI7 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
UPF3BQ9BZI7 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC3.89□□□□□ -1.79
UPF3BQ9BZI7 AC012065.2-201ENST00000421295 375 ntBASIC3.89□□□□□ -1.79
UPF3BQ9BZI7 AC092832.1-201ENST00000422934 400 ntBASIC3.89□□□□□ -1.79
UPF3BQ9BZI7 AL445524.1-202ENST00000440665 416 ntTSL 3 BASIC3.89□□□□□ -1.79
UPF3BQ9BZI7 AC104653.1-202ENST00000446401 390 ntTSL 3 BASIC3.89□□□□□ -1.79
UPF3BQ9BZI7 AC008155.2-201ENST00000464337 397 ntBASIC3.89□□□□□ -1.79
UPF3BQ9BZI7 AC073522.1-201ENST00000483312 377 ntBASIC3.89□□□□□ -1.79
UPF3BQ9BZI7 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.89□□□□□ -1.79
UPF3BQ9BZI7 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC3.89□□□□□ -1.79
UPF3BQ9BZI7 AC113398.2-201ENST00000507630 558 ntBASIC3.89□□□□□ -1.79
UPF3BQ9BZI7 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.89□□□□□ -1.79
UPF3BQ9BZI7 AC023141.12-201ENST00000512399 199 ntBASIC3.89□□□□□ -1.79
UPF3BQ9BZI7 AC103952.1-201ENST00000521872 590 ntTSL 3 BASIC3.89□□□□□ -1.79
UPF3BQ9BZI7 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC3.89□□□□□ -1.79
UPF3BQ9BZI7 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC3.89□□□□□ -1.79
UPF3BQ9BZI7 AC025260.1-201ENST00000548858 430 ntBASIC3.89□□□□□ -1.79
UPF3BQ9BZI7 AC009320.1-201ENST00000549070 349 ntTSL 3 BASIC3.89□□□□□ -1.79
UPF3BQ9BZI7 AC007493.1-202ENST00000567899 517 ntTSL 2 BASIC3.89□□□□□ -1.79
UPF3BQ9BZI7 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC3.89□□□□□ -1.79
UPF3BQ9BZI7 MIR4276-201ENST00000584832 70 ntBASIC3.89□□□□□ -1.79
UPF3BQ9BZI7 AC067852.4-201ENST00000590314 478 ntBASIC3.89□□□□□ -1.79
UPF3BQ9BZI7 AC009948.4-201ENST00000604692 675 ntBASIC3.89□□□□□ -1.79
UPF3BQ9BZI7 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC3.89□□□□□ -1.79
UPF3BQ9BZI7 AL359094.1-202ENST00000629917 1113 ntTSL 5 BASIC3.89□□□□□ -1.79
UPF3BQ9BZI7 NEB-201ENST00000172853 20634 ntAPPRIS ALT2 TSL 1 (best) BASIC3.89□□□□□ -1.79
UPF3BQ9BZI7 C5orf51-201ENST00000381647 5241 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
UPF3BQ9BZI7 RAD1P1-201ENST00000231383 813 ntBASIC3.88□□□□□ -1.79
UPF3BQ9BZI7 AC069218.2-201ENST00000411665 344 ntBASIC3.88□□□□□ -1.79
UPF3BQ9BZI7 AC013404.1-201ENST00000413068 249 ntBASIC3.88□□□□□ -1.79
UPF3BQ9BZI7 PSMA4-202ENST00000413382 1019 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
UPF3BQ9BZI7 OR1AA1P-201ENST00000419597 916 ntBASIC3.88□□□□□ -1.79
UPF3BQ9BZI7 COTL1P1-201ENST00000422309 375 ntBASIC3.88□□□□□ -1.79
UPF3BQ9BZI7 RPF2P1-201ENST00000424137 906 ntBASIC3.88□□□□□ -1.79
UPF3BQ9BZI7 AC105402.2-201ENST00000438503 358 ntBASIC3.88□□□□□ -1.79
UPF3BQ9BZI7 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.88□□□□□ -1.79
UPF3BQ9BZI7 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC3.88□□□□□ -1.79
UPF3BQ9BZI7 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC3.88□□□□□ -1.79
UPF3BQ9BZI7 LINC01158-205ENST00000458253 747 ntTSL 5 BASIC3.88□□□□□ -1.79
UPF3BQ9BZI7 APOOP4-201ENST00000513530 597 ntBASIC3.88□□□□□ -1.79
UPF3BQ9BZI7 AP001207.2-201ENST00000519490 539 ntBASIC3.88□□□□□ -1.79
UPF3BQ9BZI7 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC3.88□□□□□ -1.79
UPF3BQ9BZI7 AP000919.1-202ENST00000581139 1264 ntBASIC3.88□□□□□ -1.79
UPF3BQ9BZI7 MIR4325-201ENST00000583049 90 ntBASIC3.88□□□□□ -1.79
UPF3BQ9BZI7 AC097467.3-208ENST00000593486 670 ntTSL 5 BASIC3.88□□□□□ -1.79
UPF3BQ9BZI7 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC3.88□□□□□ -1.79
UPF3BQ9BZI7 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC3.88□□□□□ -1.79
UPF3BQ9BZI7 RPL23AP61-201ENST00000623642 466 ntBASIC3.88□□□□□ -1.79
UPF3BQ9BZI7 AC009950.2-201ENST00000636548 183 ntBASIC3.88□□□□□ -1.79
UPF3BQ9BZI7 MBNL1-206ENST00000357472 5256 ntTSL 5 BASIC3.88□□□□□ -1.79
UPF3BQ9BZI7 MBNL1-223ENST00000498502 5258 ntTSL 5 BASIC3.88□□□□□ -1.79
UPF3BQ9BZI7 ORC3-202ENST00000392844 2512 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
UPF3BQ9BZI7 DST-204ENST00000361203 22431 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
UPF3BQ9BZI7 USP44-208ENST00000552440 1818 ntTSL 5 BASIC3.88□□□□□ -1.79
UPF3BQ9BZI7 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC3.88□□□□□ -1.79
UPF3BQ9BZI7 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC3.88□□□□□ -1.79
UPF3BQ9BZI7 LINC00890-202ENST00000569275 4595 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
UPF3BQ9BZI7 SKIL-203ENST00000426052 2757 ntTSL 2 BASIC3.87□□□□□ -1.79
UPF3BQ9BZI7 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
UPF3BQ9BZI7 TRGV11-201ENST00000390340 463 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
UPF3BQ9BZI7 EI24P2-201ENST00000397776 1076 ntBASIC3.87□□□□□ -1.79
UPF3BQ9BZI7 AC063979.1-201ENST00000415539 377 ntBASIC3.87□□□□□ -1.79
UPF3BQ9BZI7 AC006960.1-201ENST00000419980 153 ntBASIC3.87□□□□□ -1.79
UPF3BQ9BZI7 Z97206.2-201ENST00000423489 589 ntTSL 3 BASIC3.87□□□□□ -1.79
UPF3BQ9BZI7 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC3.87□□□□□ -1.79
UPF3BQ9BZI7 AL392086.1-201ENST00000457632 299 ntTSL 3 BASIC3.87□□□□□ -1.79
UPF3BQ9BZI7 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC3.87□□□□□ -1.79
UPF3BQ9BZI7 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.87□□□□□ -1.79
UPF3BQ9BZI7 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC3.87□□□□□ -1.79
UPF3BQ9BZI7 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC3.87□□□□□ -1.79
UPF3BQ9BZI7 MTND5P21-201ENST00000531961 522 ntBASIC3.87□□□□□ -1.79
UPF3BQ9BZI7 GLIPR1L1-204ENST00000548623 484 ntTSL 3 BASIC3.87□□□□□ -1.79
UPF3BQ9BZI7 AC087311.2-201ENST00000549660 320 ntTSL 4 BASIC3.87□□□□□ -1.79
UPF3BQ9BZI7 LINC02301-201ENST00000553760 773 ntTSL 3 BASIC3.87□□□□□ -1.79
UPF3BQ9BZI7 AL389895.1-201ENST00000554127 252 ntBASIC3.87□□□□□ -1.79
UPF3BQ9BZI7 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC3.87□□□□□ -1.79
UPF3BQ9BZI7 AC104984.5-201ENST00000586878 94 ntBASIC3.87□□□□□ -1.79
UPF3BQ9BZI7 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.87□□□□□ -1.79
UPF3BQ9BZI7 AP005212.4-201ENST00000614206 710 ntBASIC3.87□□□□□ -1.79
UPF3BQ9BZI7 uc_338.9-201ENST00000617424 182 ntBASIC3.87□□□□□ -1.79
UPF3BQ9BZI7 AK6-205ENST00000618980 483 ntTSL 2 BASIC3.87□□□□□ -1.79
UPF3BQ9BZI7 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC3.87□□□□□ -1.79
UPF3BQ9BZI7 AC119674.1-212ENST00000641155 993 ntBASIC3.87□□□□□ -1.79
UPF3BQ9BZI7 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
UPF3BQ9BZI7 DCAF13P3-201ENST00000561147 1334 ntBASIC3.87□□□□□ -1.79
UPF3BQ9BZI7 ZNF826P-207ENST00000622273 1910 ntBASIC3.87□□□□□ -1.79
UPF3BQ9BZI7 UGT2B10-202ENST00000458688 1424 ntTSL 2 BASIC3.87□□□□□ -1.79
UPF3BQ9BZI7 RNMT-206ENST00000589866 1879 ntAPPRIS P1 TSL 1 (best) BASIC3.86□□□□□ -1.79
UPF3BQ9BZI7 PRKACB-201ENST00000370680 1914 ntTSL 1 (best) BASIC3.86□□□□□ -1.79
UPF3BQ9BZI7 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.86□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms