Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 LINC00366-201ENST00000441430 435 ntTSL 2 BASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 MTCO1P53-201ENST00000441633 699 ntBASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 MTCYBP42-201ENST00000444653 1130 ntBASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 CDKN3-205ENST00000458126 845 ntAPPRIS ALT2 TSL 5 BASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 RNU7-170P-201ENST00000459303 61 ntBASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 TMED11P-201ENST00000479478 690 ntBASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 AC069360.1-201ENST00000503469 431 ntTSL 2 BASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 SCARNA1-201ENST00000517138 166 ntBASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 LINC02365-202ENST00000520280 607 ntTSL 3 BASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 AF181450.1-201ENST00000522980 410 ntTSL 3 BASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 AP001207.1-201ENST00000524051 481 ntBASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 CASP1-212ENST00000531166 300 ntTSL 5 BASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 AC073651.3-201ENST00000545999 417 ntTSL 3 BASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 AC074029.1-201ENST00000552531 1044 ntBASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 MED6-207ENST00000554963 975 ntAPPRIS ALT1 TSL 5 BASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 AL392023.2-202ENST00000555342 494 ntTSL 5 BASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 MIR4504-201ENST00000577413 92 ntBASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 MIR4509-3-201ENST00000578671 94 ntBASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 MIR4509-2-201ENST00000583920 94 ntBASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 LAMTOR5-AS1-203ENST00000585330 463 ntTSL 2 BASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 MIR486-1-201ENST00000612171 68 ntBASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 MIR4509-1-201ENST00000618224 94 ntBASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 FP236240.3-201ENST00000623061 327 ntBASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 AC109454.4-201ENST00000623411 649 ntBASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 HSPA8P1-201ENST00000425843 1833 ntBASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.79□□□□□ -1.8
CCM2Q9BSQ5 SLC16A10-201ENST00000368850 10051 ntTSL 1 (best) BASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 U1.1-201ENST00000384101 164 ntBASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 MIR30B-201ENST00000384850 88 ntBASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 TRAJ18-201ENST00000390519 66 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 CoTC_ribozyme.1-201ENST00000408104 192 ntBASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 AC027644.1-201ENST00000419595 298 ntBASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 RPS15AP40-201ENST00000419621 391 ntBASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 USP12PY-201ENST00000427677 1064 ntBASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 GTF2IP3-201ENST00000433887 494 ntBASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 Z74696.2-201ENST00000436514 498 ntBASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 RPS29P7-201ENST00000439662 171 ntBASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 LINC01753-201ENST00000458145 631 ntTSL 3 BASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 SNORD108-201ENST00000459332 71 ntBASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 AP000873.1-201ENST00000463987 400 ntBASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 RPS20P21-201ENST00000466859 343 ntBASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 C1GALT1C1L-201ENST00000475092 1172 ntAPPRIS P1 BASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 AC083800.1-201ENST00000490594 246 ntAPPRIS P1 TSL 3 BASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 AC108941.1-201ENST00000502853 530 ntBASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 AC010406.1-201ENST00000507948 555 ntTSL 3 BASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 AC048346.1-201ENST00000510247 144 ntBASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 AC011405.1-201ENST00000514207 248 ntTSL 3 BASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 CTAGE1-202ENST00000525417 1267 ntAPPRIS ALT2 BASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 AP002004.1-202ENST00000528437 586 ntTSL 2 BASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 AC009396.3-201ENST00000555680 354 ntTSL 5 BASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 MTCYBP23-201ENST00000558717 1102 ntBASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 HSPE1P5-201ENST00000561489 272 ntBASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 AC106785.1-201ENST00000565935 262 ntBASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 AP001180.3-201ENST00000582221 145 ntBASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 AC022069.1-201ENST00000582910 658 ntBASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 AP005137.2-201ENST00000609238 400 ntBASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 AC099669.2-201ENST00000616549 437 ntBASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 VGLL4-219ENST00000638314 93 ntTSL 5 BASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 ERBIN-214ENST00000511297 4257 ntAPPRIS ALT1 TSL 5 BASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC3.78□□□□□ -1.8
CCM2Q9BSQ5 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCM2Q9BSQ5 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCM2Q9BSQ5 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC3.77□□□□□ -1.81
CCM2Q9BSQ5 TAX1BP1-213ENST00000543117 3365 ntAPPRIS ALT2 TSL 2 BASIC3.77□□□□□ -1.81
CCM2Q9BSQ5 MIR181A1HG-203ENST00000436880 2308 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCM2Q9BSQ5 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.77□□□□□ -1.81
CCM2Q9BSQ5 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCM2Q9BSQ5 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCM2Q9BSQ5 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CCM2Q9BSQ5 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
CCM2Q9BSQ5 OR2AP1-201ENST00000321688 930 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
CCM2Q9BSQ5 RNU6-619P-201ENST00000365146 108 ntBASIC3.77□□□□□ -1.81
CCM2Q9BSQ5 PARD3-204ENST00000374768 799 ntTSL 3 BASIC3.77□□□□□ -1.81
CCM2Q9BSQ5 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC3.77□□□□□ -1.81
CCM2Q9BSQ5 RNU6-444P-201ENST00000383988 108 ntBASIC3.77□□□□□ -1.81
CCM2Q9BSQ5 AC092155.1-202ENST00000416111 932 ntTSL 1 (best) BASIC3.77□□□□□ -1.81
CCM2Q9BSQ5 RPL17P36-201ENST00000420302 549 ntBASIC3.77□□□□□ -1.81
CCM2Q9BSQ5 MTND2P9-201ENST00000422293 931 ntBASIC3.77□□□□□ -1.81
CCM2Q9BSQ5 AC023469.2-201ENST00000425983 657 ntTSL 5 BASIC3.77□□□□□ -1.81
CCM2Q9BSQ5 AC008065.1-201ENST00000428525 348 ntBASIC3.77□□□□□ -1.81
CCM2Q9BSQ5 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.77□□□□□ -1.81
CCM2Q9BSQ5 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC3.77□□□□□ -1.81
CCM2Q9BSQ5 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC3.77□□□□□ -1.81
CCM2Q9BSQ5 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.77□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 115.9 ms