Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 DCDC1-211ENST00000597505 5352 ntAPPRIS ALT2 TSL 5 BASIC2.07□□□□□ -2.08
ALMS1Q8TCU4 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
ALMS1Q8TCU4 NPSR1-AS1-205ENST00000436945 1406 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
ALMS1Q8TCU4 RPS15AP6-201ENST00000420703 385 ntBASIC2.07□□□□□ -2.08
ALMS1Q8TCU4 NPM1P24-201ENST00000428039 894 ntBASIC2.07□□□□□ -2.08
ALMS1Q8TCU4 MRPS33P4-201ENST00000434892 317 ntBASIC2.07□□□□□ -2.08
ALMS1Q8TCU4 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC2.07□□□□□ -2.08
ALMS1Q8TCU4 MIR4425-201ENST00000580572 84 ntBASIC2.07□□□□□ -2.08
ALMS1Q8TCU4 BNIP3P38-201ENST00000601117 544 ntBASIC2.07□□□□□ -2.08
ALMS1Q8TCU4 AC244472.1-201ENST00000620773 347 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
ALMS1Q8TCU4 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC2.07□□□□□ -2.08
ALMS1Q8TCU4 MIR184-201ENST00000384962 84 ntBASIC2.07□□□□□ -2.08
ALMS1Q8TCU4 HSPE1P8-201ENST00000406997 288 ntBASIC2.07□□□□□ -2.08
ALMS1Q8TCU4 FTH1P6-201ENST00000430768 320 ntBASIC2.07□□□□□ -2.08
ALMS1Q8TCU4 NDUFB4P9-201ENST00000511646 388 ntBASIC2.07□□□□□ -2.08
ALMS1Q8TCU4 AC107934.2-201ENST00000518653 310 ntBASIC2.07□□□□□ -2.08
ALMS1Q8TCU4 AC084116.2-201ENST00000520171 415 ntTSL 4 BASIC2.07□□□□□ -2.08
ALMS1Q8TCU4 AC007424.1-203ENST00000554613 687 ntBASIC2.07□□□□□ -2.08
ALMS1Q8TCU4 AC017076.1-201ENST00000607613 578 ntBASIC2.07□□□□□ -2.08
ALMS1Q8TCU4 ARHGAP5-202ENST00000345122 9604 ntAPPRIS P3 TSL 5 BASIC2.07□□□□□ -2.08
ALMS1Q8TCU4 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC2.07□□□□□ -2.08
ALMS1Q8TCU4 STEAP4-201ENST00000301959 2321 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 TRBV12-1-201ENST00000479785 344 ntBASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 AC022335.1-204ENST00000590779 600 ntAPPRIS ALT2 TSL 2 BASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 PRELID3BP8-201ENST00000604148 295 ntBASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 AC022031.1-201ENST00000585985 2593 ntBASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 AC090971.4-201ENST00000560291 1800 ntBASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 MGP-203ENST00000539261 1405 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 AC131280.1-202ENST00000624067 4211 ntBASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 PGGT1B-203ENST00000419445 9545 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 SERPINA7-201ENST00000327674 2642 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 UBA6-201ENST00000322244 9564 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 HNRNPDLP1-201ENST00000412834 550 ntBASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 RFESD-208ENST00000513950 464 ntTSL 5 BASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 AL356022.1-201ENST00000557465 483 ntTSL 5 BASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 MAPKAPK5-AS1-205ENST00000590479 543 ntTSL 2 BASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 AC007318.2-201ENST00000620999 243 ntBASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 VPS13C-202ENST00000261517 13400 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 FAM111A-207ENST00000531147 3996 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 AC008264.1-201ENST00000447612 367 ntBASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 ELOCP23-201ENST00000452014 332 ntBASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 AC034159.1-201ENST00000513885 583 ntBASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 AL049874.4-201ENST00000557593 255 ntBASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 RNU6-84P-201ENST00000607737 102 ntBASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 PRLR-217ENST00000618457 11688 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 MAP4K3-205ENST00000437545 3924 ntTSL 5 BASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 OXR1-207ENST00000497705 2007 ntTSL 2 BASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 RNU6-283P-201ENST00000364788 107 ntBASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 EI24P2-201ENST00000397776 1076 ntBASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 RNA5SP184-201ENST00000411071 108 ntBASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 RNA5SP247-201ENST00000411181 105 ntBASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 AC126124.2-201ENST00000413542 321 ntBASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 RPS7P13-201ENST00000413955 498 ntBASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 SEPT7P6-201ENST00000469999 1143 ntBASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 ARL2BPP6-201ENST00000512757 439 ntBASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 AC009097.3-201ENST00000563557 1018 ntBASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 AD001527.1-201ENST00000604228 379 ntTSL 5 BASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 AC027045.1-201ENST00000609065 202 ntTSL 5 BASIC2.06□□□□□ -2.08
ALMS1Q8TCU4 MGA-201ENST00000219905 12042 ntAPPRIS P4 TSL 5 BASIC2.05□□□□□ -2.08
ALMS1Q8TCU4 GPR34-202ENST00000378142 1928 ntAPPRIS P1 TSL 1 (best) BASIC2.05□□□□□ -2.08
ALMS1Q8TCU4 AC093725.1-201ENST00000508135 2672 ntTSL 5 BASIC2.05□□□□□ -2.08
ALMS1Q8TCU4 PTP4A1P5-201ENST00000420305 455 ntBASIC2.05□□□□□ -2.08
ALMS1Q8TCU4 BACH1-IT3-201ENST00000429843 406 ntTSL 2 BASIC2.05□□□□□ -2.08
ALMS1Q8TCU4 AC104687.1-201ENST00000485829 412 ntBASIC2.05□□□□□ -2.08
ALMS1Q8TCU4 RNU4ATAC15P-201ENST00000516415 126 ntBASIC2.05□□□□□ -2.08
ALMS1Q8TCU4 LINC00310-206ENST00000609947 892 ntTSL 5 BASIC2.05□□□□□ -2.08
ALMS1Q8TCU4 C8orf59-210ENST00000614462 734 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
ALMS1Q8TCU4 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC2.05□□□□□ -2.08
ALMS1Q8TCU4 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
ALMS1Q8TCU4 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.05□□□□□ -2.08
ALMS1Q8TCU4 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC2.05□□□□□ -2.08
ALMS1Q8TCU4 AL136116.1-201ENST00000403591 381 ntBASIC2.05□□□□□ -2.08
ALMS1Q8TCU4 MTCO3P31-201ENST00000405526 789 ntBASIC2.05□□□□□ -2.08
ALMS1Q8TCU4 AC012498.1-201ENST00000424037 437 ntBASIC2.05□□□□□ -2.08
ALMS1Q8TCU4 AC007179.2-207ENST00000435557 556 ntTSL 4 BASIC2.05□□□□□ -2.08
ALMS1Q8TCU4 CXorf51B-201ENST00000438525 436 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
ALMS1Q8TCU4 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC2.05□□□□□ -2.08
ALMS1Q8TCU4 ANKRD30BP3-201ENST00000444850 1070 ntBASIC2.05□□□□□ -2.08
ALMS1Q8TCU4 ANXA2P1-201ENST00000505539 926 ntBASIC2.05□□□□□ -2.08
ALMS1Q8TCU4 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.05□□□□□ -2.08
ALMS1Q8TCU4 AC011602.1-201ENST00000546484 331 ntBASIC2.05□□□□□ -2.08
ALMS1Q8TCU4 RGS5-201ENST00000313961 5862 ntAPPRIS P3 TSL 1 (best) BASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 99.9 ms