Protein–RNA interactions for Protein: Q8N3P4

VPS8, Vacuolar protein sorting-associated protein 8 homolog, humanhuman

Predictions only

Length 1,428 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8Q8N3P4 AL109933.2-201ENST00000452651 260 ntBASIC4.35□□□□□ -1.71
VPS8Q8N3P4 OR9N1P-201ENST00000491296 333 ntBASIC4.35□□□□□ -1.71
VPS8Q8N3P4 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC4.35□□□□□ -1.71
VPS8Q8N3P4 AC072062.1-210ENST00000628464 1315 ntTSL 5 BASIC4.35□□□□□ -1.71
VPS8Q8N3P4 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC4.35□□□□□ -1.71
VPS8Q8N3P4 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS8Q8N3P4 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC4.35□□□□□ -1.71
VPS8Q8N3P4 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.35□□□□□ -1.71
VPS8Q8N3P4 RFESD-202ENST00000380005 2587 ntTSL 2 BASIC4.34□□□□□ -1.71
VPS8Q8N3P4 RNU6-859P-201ENST00000362728 107 ntBASIC4.34□□□□□ -1.71
VPS8Q8N3P4 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.71
VPS8Q8N3P4 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC4.34□□□□□ -1.71
VPS8Q8N3P4 AC112220.1-201ENST00000434628 355 ntBASIC4.34□□□□□ -1.71
VPS8Q8N3P4 AC135999.1-201ENST00000478962 479 ntBASIC4.34□□□□□ -1.71
VPS8Q8N3P4 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC4.34□□□□□ -1.71
VPS8Q8N3P4 DYNLL1P6-201ENST00000503440 264 ntBASIC4.34□□□□□ -1.71
VPS8Q8N3P4 AC008728.1-201ENST00000512730 691 ntTSL 2 BASIC4.34□□□□□ -1.71
VPS8Q8N3P4 RNU6-1334P-201ENST00000516032 105 ntBASIC4.34□□□□□ -1.71
VPS8Q8N3P4 COX6CP8-201ENST00000522620 226 ntBASIC4.34□□□□□ -1.71
VPS8Q8N3P4 AC026620.1-201ENST00000584815 326 ntTSL 3 BASIC4.34□□□□□ -1.71
VPS8Q8N3P4 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC4.34□□□□□ -1.71
VPS8Q8N3P4 AL020991.1-201ENST00000612314 373 ntBASIC4.34□□□□□ -1.71
VPS8Q8N3P4 OR5AQ1P-202ENST00000641257 1534 ntBASIC4.34□□□□□ -1.71
VPS8Q8N3P4 TAB3P1-202ENST00000452645 1634 ntBASIC4.34□□□□□ -1.71
VPS8Q8N3P4 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
VPS8Q8N3P4 MTCO1P8-201ENST00000416914 1523 ntBASIC4.33□□□□□ -1.72
VPS8Q8N3P4 TMEM38B-201ENST00000374688 3956 ntTSL 2 BASIC4.33□□□□□ -1.72
VPS8Q8N3P4 MIR34A-201ENST00000385130 110 ntBASIC4.33□□□□□ -1.72
VPS8Q8N3P4 AC013470.3-201ENST00000420252 1194 ntBASIC4.33□□□□□ -1.72
VPS8Q8N3P4 AL592437.1-201ENST00000443781 492 ntBASIC4.33□□□□□ -1.72
VPS8Q8N3P4 RPL31P13-201ENST00000484151 370 ntBASIC4.33□□□□□ -1.72
VPS8Q8N3P4 RPS27AP18-201ENST00000515536 459 ntBASIC4.33□□□□□ -1.72
VPS8Q8N3P4 AC105999.2-201ENST00000521363 881 ntTSL 2 BASIC4.33□□□□□ -1.72
VPS8Q8N3P4 OR5M10-201ENST00000526812 1052 ntAPPRIS P1 BASIC4.33□□□□□ -1.72
VPS8Q8N3P4 SLC12A1-210ENST00000561031 735 ntTSL 2 BASIC4.33□□□□□ -1.72
VPS8Q8N3P4 AC138761.3-201ENST00000579993 334 ntBASIC4.33□□□□□ -1.72
VPS8Q8N3P4 AC131238.1-201ENST00000617135 328 ntBASIC4.33□□□□□ -1.72
VPS8Q8N3P4 Z99129.2-201ENST00000619967 314 ntBASIC4.33□□□□□ -1.72
VPS8Q8N3P4 AC092628.2-201ENST00000622492 339 ntBASIC4.33□□□□□ -1.72
VPS8Q8N3P4 AC093775.1-201ENST00000624154 1868 ntBASIC4.33□□□□□ -1.72
VPS8Q8N3P4 RAD21-210ENST00000523986 2506 ntTSL 2 BASIC4.32□□□□□ -1.72
VPS8Q8N3P4 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC4.32□□□□□ -1.72
VPS8Q8N3P4 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
VPS8Q8N3P4 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC4.32□□□□□ -1.72
VPS8Q8N3P4 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
VPS8Q8N3P4 UBE2V1P2-201ENST00000397758 440 ntBASIC4.32□□□□□ -1.72
VPS8Q8N3P4 AL590385.1-201ENST00000419446 462 ntTSL 3 BASIC4.32□□□□□ -1.72
VPS8Q8N3P4 RPL23AP31-201ENST00000456160 467 ntBASIC4.32□□□□□ -1.72
VPS8Q8N3P4 AC078817.1-201ENST00000492623 435 ntBASIC4.32□□□□□ -1.72
VPS8Q8N3P4 LINC02213-202ENST00000506021 774 ntTSL 2 BASIC4.32□□□□□ -1.72
VPS8Q8N3P4 AC069306.1-201ENST00000507006 843 ntBASIC4.32□□□□□ -1.72
VPS8Q8N3P4 SETP12-201ENST00000514068 805 ntBASIC4.32□□□□□ -1.72
VPS8Q8N3P4 ZFPM2-AS1-204ENST00000520433 748 ntTSL 3 BASIC4.32□□□□□ -1.72
VPS8Q8N3P4 AC107918.3-201ENST00000533272 382 ntBASIC4.32□□□□□ -1.72
VPS8Q8N3P4 AC055876.1-202ENST00000567053 138 ntBASIC4.32□□□□□ -1.72
VPS8Q8N3P4 AL390838.2-201ENST00000602394 274 ntBASIC4.32□□□□□ -1.72
VPS8Q8N3P4 AL365440.2-201ENST00000419738 2597 ntTSL 2 BASIC4.32□□□□□ -1.72
VPS8Q8N3P4 KIAA0586-215ENST00000619722 5597 ntAPPRIS ALT2 TSL 2 BASIC4.32□□□□□ -1.72
VPS8Q8N3P4 OLFM3-206ENST00000536598 2801 ntTSL 5 BASIC4.31□□□□□ -1.72
VPS8Q8N3P4 CSTA-201ENST00000264474 751 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
VPS8Q8N3P4 C3orf49-201ENST00000295896 1292 ntAPPRIS P5 TSL 2 BASIC4.31□□□□□ -1.72
VPS8Q8N3P4 RFX3-203ENST00000381984 364 ntTSL 3 BASIC4.31□□□□□ -1.72
VPS8Q8N3P4 AL356057.3-201ENST00000402607 340 ntBASIC4.31□□□□□ -1.72
VPS8Q8N3P4 RNA5SP80-201ENST00000410475 111 ntBASIC4.31□□□□□ -1.72
VPS8Q8N3P4 TMEM108-AS1-201ENST00000504993 705 ntTSL 3 BASIC4.31□□□□□ -1.72
VPS8Q8N3P4 RNA5SP380-201ENST00000517190 98 ntBASIC4.31□□□□□ -1.72
VPS8Q8N3P4 AC135001.1-201ENST00000544546 283 ntBASIC4.31□□□□□ -1.72
VPS8Q8N3P4 AL358154.1-201ENST00000627075 444 ntTSL 3 BASIC4.31□□□□□ -1.72
VPS8Q8N3P4 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.31□□□□□ -1.72
VPS8Q8N3P4 STXBP4-203ENST00000405898 2229 ntTSL 5 BASIC4.31□□□□□ -1.72
VPS8Q8N3P4 SNORA5B-201ENST00000363786 132 ntBASIC4.3□□□□□ -1.72
VPS8Q8N3P4 AC019097.1-201ENST00000424783 735 ntBASIC4.3□□□□□ -1.72
VPS8Q8N3P4 RPS3P1-201ENST00000456781 192 ntBASIC4.3□□□□□ -1.72
VPS8Q8N3P4 SNORD109B-201ENST00000458961 67 ntBASIC4.3□□□□□ -1.72
VPS8Q8N3P4 SNORD109A-201ENST00000459128 67 ntBASIC4.3□□□□□ -1.72
VPS8Q8N3P4 AC074099.1-201ENST00000634100 679 ntTSL 5 BASIC4.3□□□□□ -1.72
VPS8Q8N3P4 LINC01419-201ENST00000522365 1521 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
VPS8Q8N3P4 AC011503.2-201ENST00000594230 1500 ntBASIC4.3□□□□□ -1.72
VPS8Q8N3P4 PDE1A-205ENST00000435564 4885 ntAPPRIS P3 TSL 1 (best) BASIC4.3□□□□□ -1.72
VPS8Q8N3P4 AC007342.7-201ENST00000624610 2337 ntBASIC4.3□□□□□ -1.72
VPS8Q8N3P4 AC019155.1-201ENST00000382242 574 ntBASIC4.29□□□□□ -1.72
VPS8Q8N3P4 AL590004.2-201ENST00000404787 371 ntBASIC4.29□□□□□ -1.72
VPS8Q8N3P4 RNA5SP184-201ENST00000411071 108 ntBASIC4.29□□□□□ -1.72
VPS8Q8N3P4 AC073136.2-201ENST00000417282 849 ntBASIC4.29□□□□□ -1.72
VPS8Q8N3P4 IPMKP1-201ENST00000425988 855 ntBASIC4.29□□□□□ -1.72
VPS8Q8N3P4 NIPA2P2-201ENST00000496376 1083 ntBASIC4.29□□□□□ -1.72
VPS8Q8N3P4 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS8Q8N3P4 HPRT1P3-201ENST00000539521 576 ntBASIC4.29□□□□□ -1.72
VPS8Q8N3P4 PDCD5P1-201ENST00000543528 309 ntBASIC4.29□□□□□ -1.72
VPS8Q8N3P4 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS8Q8N3P4 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC4.29□□□□□ -1.72
VPS8Q8N3P4 AC025271.3-201ENST00000563031 255 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS8Q8N3P4 ZNF861P-201ENST00000588126 639 ntBASIC4.29□□□□□ -1.72
VPS8Q8N3P4 AC005046.1-201ENST00000608515 625 ntBASIC4.29□□□□□ -1.72
VPS8Q8N3P4 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS8Q8N3P4 AP003499.2-201ENST00000624100 483 ntBASIC4.29□□□□□ -1.72
VPS8Q8N3P4 LRRC39-203ENST00000370138 1466 ntTSL 5 BASIC4.29□□□□□ -1.72
VPS8Q8N3P4 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC4.29□□□□□ -1.72
VPS8Q8N3P4 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC4.29□□□□□ -1.72
VPS8Q8N3P4 ASNSP3-201ENST00000451989 1306 ntBASIC4.29□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 108.2 ms