Protein–RNA interactions for Protein: Q8N2C3

DEPDC4, DEP domain-containing protein 4, humanhuman

Predictions only

Length 294 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4Q8N2C3 RN7SL502P-201ENST00000481857 290 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 AC114728.1-201ENST00000488289 483 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 RN7SL350P-201ENST00000492591 299 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 RPL7P23-201ENST00000493874 747 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 AL117692.1-201ENST00000494283 713 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 MFAP3L-206ENST00000506110 548 ntTSL 3 BASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 AC091849.1-201ENST00000509920 121 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 MINOS1P4-201ENST00000515470 318 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 RNU6-764P-201ENST00000516396 105 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 RNU6-1069P-201ENST00000516612 133 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 RANP9-201ENST00000519957 271 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 KC877392.1-201ENST00000524855 426 ntTSL 3 BASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 AP001922.4-201ENST00000526967 290 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 AP000873.2-203ENST00000528524 549 ntTSL 2 BASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 AC012038.2-201ENST00000553006 256 ntTSL 3 BASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 AC110588.1-201ENST00000559699 137 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 AP3S2-214ENST00000560940 519 ntTSL 5 BASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 AC007494.1-201ENST00000562293 760 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 AC090772.1-201ENST00000583782 507 ntTSL 5 BASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 AC174048.1-201ENST00000603389 144 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 AC145423.1-201ENST00000605712 336 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 AL022394.1-201ENST00000606979 292 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 AC243829.4-202ENST00000610845 410 ntTSL 5 BASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 HOXA11-AS1_3.1-201ENST00000613383 98 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 TUG1_2.1-201ENST00000614234 87 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 MIR6130-201ENST00000619419 109 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 SCRN1-210ENST00000631335 423 ntTSL 5 BASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 KIAA1524-207ENST00000619684 2839 ntAPPRIS ALT1 TSL 5 BASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 FAM91A3P-201ENST00000456826 2544 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 ZNF211-205ENST00000391703 2239 ntTSL 2 BASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 ADAMDEC1-201ENST00000256412 2348 ntAPPRIS P3 TSL 1 (best) BASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 FAM197Y8-201ENST00000426661 2340 ntTSL 2 BASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 FAM197Y6-202ENST00000442145 2340 ntTSL 2 BASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 NBPF14-211ENST00000621070 2701 ntTSL 5 BASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 AC140134.1-201ENST00000511830 3544 ntBASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 CNTRL-204ENST00000373847 3372 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
DEPDC4Q8N2C3 TMEM217-202ENST00000356757 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.44
DEPDC4Q8N2C3 RNF145-206ENST00000519865 3478 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.44
DEPDC4Q8N2C3 AC000374.1-201ENST00000434698 1745 ntBASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 AC009095.1-201ENST00000388909 1326 ntTSL 5 BASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 TTF2-201ENST00000369466 9462 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 AC110373.1-201ENST00000505994 3505 ntBASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 ZNF711-202ENST00000360700 4844 ntAPPRIS ALT2 TSL 1 (best) BASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 ZPLD1-201ENST00000306176 3619 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 FGF7-202ENST00000560270 1688 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 ZNF605-204ENST00000392321 6156 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 ARGFX-201ENST00000334384 992 ntAPPRIS P1 TSL 3 BASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 RNU1-59P-201ENST00000364829 162 ntBASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 RNU6-146P-201ENST00000384602 108 ntBASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 MT-TC-201ENST00000387405 66 ntBASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 RNU4-25P-201ENST00000410569 230 ntBASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 RN7SKP205-201ENST00000410999 307 ntBASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 LINC00354-201ENST00000412119 347 ntTSL 5 BASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 AL139095.3-201ENST00000419672 1203 ntBASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 AC107057.1-201ENST00000425763 319 ntTSL 3 BASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 AC008065.1-201ENST00000428525 348 ntBASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 MTCO3P45-201ENST00000443036 613 ntBASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 AC104058.1-201ENST00000448028 297 ntBASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 AC234775.1-201ENST00000454247 670 ntBASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 AC007967.1-201ENST00000455422 1159 ntBASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 AC008481.1-201ENST00000463278 396 ntBASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 RN7SL216P-201ENST00000471607 298 ntBASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 AP002812.1-201ENST00000495378 474 ntBASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 AC099499.1-201ENST00000505040 558 ntTSL 3 BASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 RBBP4P6-201ENST00000508098 202 ntBASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 AC116337.1-201ENST00000509680 687 ntBASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 SNX18P23-201ENST00000510867 677 ntBASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 SNORA14.1-201ENST00000516113 141 ntBASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 RNU4ATAC7P-201ENST00000516280 125 ntBASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 RNU6-941P-201ENST00000516346 108 ntBASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 IGKV2D-36-201ENST00000518643 226 ntBASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 AP002768.1-201ENST00000526741 320 ntTSL 3 BASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 RN7SL66P-201ENST00000582099 264 ntBASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 MIR4512-201ENST00000583257 77 ntBASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 AL136084.2-214ENST00000587726 716 ntTSL 5 BASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 5S_rRNA.23-201ENST00000612086 102 ntBASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 U4.1-201ENST00000620349 87 ntBASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 SNORA16A-202ENST00000628458 135 ntBASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 AL132640.3-201ENST00000630473 177 ntBASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 LINC01415-201ENST00000587320 4071 ntTSL 2 BASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 CREM-203ENST00000344351 1625 ntTSL 2 BASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 OR6C4-202ENST00000641569 5141 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 ZNF807-201ENST00000328088 1707 ntBASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 PRRC1-201ENST00000296666 4699 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 TRIM64B-201ENST00000329862 2689 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 CNTNAP4-205ENST00000476707 4355 ntTSL 2 BASIC6.02□□□□□ -1.45
DEPDC4Q8N2C3 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
DEPDC4Q8N2C3 AC022325.1-201ENST00000502748 2199 ntBASIC6.01□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 97.5 ms