Protein–RNA interactions for Protein: Q8N1M1

BEST3, Bestrophin-3, humanhuman

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST3Q8N1M1 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
BEST3Q8N1M1 RNU6-984P-201ENST00000363236 109 ntBASIC4.01□□□□□ -1.77
BEST3Q8N1M1 RNU6-1243P-201ENST00000364028 107 ntBASIC4.01□□□□□ -1.77
BEST3Q8N1M1 SNORA4.1-201ENST00000364263 144 ntBASIC4.01□□□□□ -1.77
BEST3Q8N1M1 RNA5SP151-201ENST00000365632 117 ntBASIC4.01□□□□□ -1.77
BEST3Q8N1M1 AC009518.2-201ENST00000418056 731 ntBASIC4.01□□□□□ -1.77
BEST3Q8N1M1 AC090960.1-201ENST00000421072 306 ntBASIC4.01□□□□□ -1.77
BEST3Q8N1M1 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC4.01□□□□□ -1.77
BEST3Q8N1M1 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.01□□□□□ -1.77
BEST3Q8N1M1 OR5H14-201ENST00000437310 1080 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
BEST3Q8N1M1 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC4.01□□□□□ -1.77
BEST3Q8N1M1 AL591503.2-201ENST00000442314 1005 ntBASIC4.01□□□□□ -1.77
BEST3Q8N1M1 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.01□□□□□ -1.77
BEST3Q8N1M1 TTTY23B-202ENST00000451467 512 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
BEST3Q8N1M1 VN1R32P-201ENST00000452234 905 ntBASIC4.01□□□□□ -1.77
BEST3Q8N1M1 TTTY23-201ENST00000452889 512 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
BEST3Q8N1M1 AC009963.2-201ENST00000453431 138 ntBASIC4.01□□□□□ -1.77
BEST3Q8N1M1 DDX39BP2-208ENST00000453923 258 ntBASIC4.01□□□□□ -1.77
BEST3Q8N1M1 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC4.01□□□□□ -1.77
BEST3Q8N1M1 RNU7-125P-201ENST00000458760 62 ntBASIC4.01□□□□□ -1.77
BEST3Q8N1M1 RPL35P6-201ENST00000490024 372 ntBASIC4.01□□□□□ -1.77
BEST3Q8N1M1 OR4G11P-201ENST00000492842 939 ntBASIC4.01□□□□□ -1.77
BEST3Q8N1M1 ZBTB20-AS3-201ENST00000498630 464 ntTSL 3 BASIC4.01□□□□□ -1.77
BEST3Q8N1M1 PPBPP1-201ENST00000510807 373 ntBASIC4.01□□□□□ -1.77
BEST3Q8N1M1 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.01□□□□□ -1.77
BEST3Q8N1M1 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC4.01□□□□□ -1.77
BEST3Q8N1M1 AC104057.1-201ENST00000515547 497 ntBASIC4.01□□□□□ -1.77
BEST3Q8N1M1 RNU6-232P-201ENST00000517144 64 ntBASIC4.01□□□□□ -1.77
BEST3Q8N1M1 AF186190.1-201ENST00000517470 480 ntBASIC4.01□□□□□ -1.77
BEST3Q8N1M1 AC022390.1-201ENST00000517854 434 ntTSL 3 BASIC4.01□□□□□ -1.77
BEST3Q8N1M1 ZNF705CP-201ENST00000530515 889 ntBASIC4.01□□□□□ -1.77
BEST3Q8N1M1 AP003170.4-201ENST00000543486 586 ntTSL 3 BASIC4.01□□□□□ -1.77
BEST3Q8N1M1 DYNLL1P4-201ENST00000549314 266 ntBASIC4.01□□□□□ -1.77
BEST3Q8N1M1 MRPL42-208ENST00000552217 920 ntAPPRIS P2 TSL 2 BASIC4.01□□□□□ -1.77
BEST3Q8N1M1 AC068446.3-201ENST00000555285 382 ntBASIC4.01□□□□□ -1.77
BEST3Q8N1M1 AC025884.1-201ENST00000556034 378 ntBASIC4.01□□□□□ -1.77
BEST3Q8N1M1 CFL2-206ENST00000556161 546 ntTSL 4 BASIC4.01□□□□□ -1.77
BEST3Q8N1M1 TVP23BP1-201ENST00000557500 617 ntBASIC4.01□□□□□ -1.77
BEST3Q8N1M1 AL162872.1-201ENST00000557709 448 ntTSL 3 BASIC4.01□□□□□ -1.77
BEST3Q8N1M1 AC007224.1-201ENST00000564410 144 ntBASIC4.01□□□□□ -1.77
BEST3Q8N1M1 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC4.01□□□□□ -1.77
BEST3Q8N1M1 MIR3160-1-201ENST00000577972 85 ntBASIC4.01□□□□□ -1.77
BEST3Q8N1M1 RPL38-208ENST00000584577 344 ntAPPRIS ALT1 TSL 3 BASIC4.01□□□□□ -1.77
BEST3Q8N1M1 AL020997.2-201ENST00000602607 184 ntBASIC4.01□□□□□ -1.77
BEST3Q8N1M1 AL160290.3-201ENST00000604869 165 ntBASIC4.01□□□□□ -1.77
BEST3Q8N1M1 AC010857.1-201ENST00000606398 594 ntBASIC4.01□□□□□ -1.77
BEST3Q8N1M1 AP002360.3-201ENST00000607673 710 ntBASIC4.01□□□□□ -1.77
BEST3Q8N1M1 AL355512.1-201ENST00000609514 488 ntTSL 5 BASIC4.01□□□□□ -1.77
BEST3Q8N1M1 ZYXP1-201ENST00000617638 118 ntBASIC4.01□□□□□ -1.77
BEST3Q8N1M1 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC4.01□□□□□ -1.77
BEST3Q8N1M1 OR8K3-202ENST00000623845 939 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
BEST3Q8N1M1 AC026422.1-201ENST00000623961 452 ntBASIC4.01□□□□□ -1.77
BEST3Q8N1M1 AC009039.2-201ENST00000624524 529 ntBASIC4.01□□□□□ -1.77
BEST3Q8N1M1 AF067845.5-201ENST00000633906 437 ntTSL 3 BASIC4.01□□□□□ -1.77
BEST3Q8N1M1 LINC01709-202ENST00000635702 1204 ntTSL 5 BASIC4.01□□□□□ -1.77
BEST3Q8N1M1 MAPK10-304ENST00000641341 3984 ntBASIC4.01□□□□□ -1.77
BEST3Q8N1M1 HPGDS-201ENST00000295256 1636 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
BEST3Q8N1M1 OR9H1P-201ENST00000446393 4888 ntAPPRIS P1 BASIC4.01□□□□□ -1.77
BEST3Q8N1M1 CDK14-201ENST00000265741 4953 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
BEST3Q8N1M1 TPRG1-201ENST00000345063 5479 ntAPPRIS P1 TSL 1 (best) BASIC4.01□□□□□ -1.77
BEST3Q8N1M1 CREM-206ENST00000354759 1589 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
BEST3Q8N1M1 CCNYL2-202ENST00000637719 3311 ntTSL 2 BASIC4.01□□□□□ -1.77
BEST3Q8N1M1 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.01□□□□□ -1.77
BEST3Q8N1M1 ANO3-204ENST00000531568 3117 ntAPPRIS ALT2 TSL 2 BASIC4.01□□□□□ -1.77
BEST3Q8N1M1 PLCL1-203ENST00000437704 5979 ntTSL 1 (best) BASIC4.01□□□□□ -1.77
BEST3Q8N1M1 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4□□□□□ -1.77
BEST3Q8N1M1 ELOVL7-203ENST00000505959 4165 ntTSL 1 (best) BASIC4□□□□□ -1.77
BEST3Q8N1M1 RGPD1-202ENST00000409776 6692 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
BEST3Q8N1M1 KLRC1-201ENST00000347831 1332 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
BEST3Q8N1M1 OR5BR1P-201ENST00000524992 1330 ntBASIC4□□□□□ -1.77
BEST3Q8N1M1 KCNJ1-202ENST00000324036 2614 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
BEST3Q8N1M1 POLK-204ENST00000504026 1484 ntTSL 1 (best) BASIC4□□□□□ -1.77
BEST3Q8N1M1 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4□□□□□ -1.77
BEST3Q8N1M1 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
BEST3Q8N1M1 BRCA2-201ENST00000380152 11986 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
BEST3Q8N1M1 LINC01902-202ENST00000636983 4607 ntTSL 5 BASIC4□□□□□ -1.77
BEST3Q8N1M1 SNRPEP3-201ENST00000338402 276 ntBASIC4□□□□□ -1.77
BEST3Q8N1M1 RNA5SP175-201ENST00000364275 119 ntBASIC4□□□□□ -1.77
BEST3Q8N1M1 CUBN-201ENST00000377823 705 ntTSL 3 BASIC4□□□□□ -1.77
BEST3Q8N1M1 RNU6-657P-201ENST00000383904 107 ntBASIC4□□□□□ -1.77
BEST3Q8N1M1 AC097374.1-203ENST00000400783 485 ntBASIC4□□□□□ -1.77
BEST3Q8N1M1 AL023807.1-201ENST00000407932 359 ntBASIC4□□□□□ -1.77
BEST3Q8N1M1 EIF4A1P3-201ENST00000411521 244 ntBASIC4□□□□□ -1.77
BEST3Q8N1M1 AC069218.2-201ENST00000411665 344 ntBASIC4□□□□□ -1.77
BEST3Q8N1M1 AL138785.1-201ENST00000425821 331 ntBASIC4□□□□□ -1.77
BEST3Q8N1M1 COX6CP15-201ENST00000426313 211 ntBASIC4□□□□□ -1.77
BEST3Q8N1M1 NPM1P34-201ENST00000428821 893 ntBASIC4□□□□□ -1.77
BEST3Q8N1M1 AC005828.1-201ENST00000431604 524 ntTSL 5 BASIC4□□□□□ -1.77
BEST3Q8N1M1 LINC01004-201ENST00000445184 686 ntTSL 5 BASIC4□□□□□ -1.77
BEST3Q8N1M1 VPS29-202ENST00000447578 996 ntTSL 1 (best) BASIC4□□□□□ -1.77
BEST3Q8N1M1 AC114755.5-201ENST00000447760 831 ntBASIC4□□□□□ -1.77
BEST3Q8N1M1 ZNF736P5Y-201ENST00000451173 805 ntBASIC4□□□□□ -1.77
BEST3Q8N1M1 AL355613.1-201ENST00000451856 480 ntTSL 2 BASIC4□□□□□ -1.77
BEST3Q8N1M1 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC4□□□□□ -1.77
BEST3Q8N1M1 AC010468.1-201ENST00000461022 817 ntBASIC4□□□□□ -1.77
BEST3Q8N1M1 LINC02077-201ENST00000465795 409 ntTSL 3 BASIC4□□□□□ -1.77
BEST3Q8N1M1 FPGT-203ENST00000467578 601 ntTSL 2 BASIC4□□□□□ -1.77
BEST3Q8N1M1 RPL35AP15-201ENST00000468042 339 ntBASIC4□□□□□ -1.77
BEST3Q8N1M1 BZW1P2-201ENST00000473537 826 ntBASIC4□□□□□ -1.77
BEST3Q8N1M1 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC4□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 97.6 ms