Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 SLCO1B1-201ENST00000256958 2229 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 MGAT4A-204ENST00000414521 3709 ntTSL 2 BASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 SGO1P1-201ENST00000603525 1447 ntBASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 HDX-202ENST00000373177 2924 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 CRISPLD1-205ENST00000523524 2100 ntTSL 2 BASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 AC138393.1-206ENST00000540997 1886 ntBASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 SERPINI2-206ENST00000471111 1331 ntAPPRIS P1 TSL 1 (best) BASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 AL122126.1-201ENST00000546905 1318 ntBASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 LTN1-207ENST00000614971 7756 ntTSL 1 (best) BASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 FILIP1L-209ENST00000487087 2321 ntTSL 5 BASIC3.41□□□□□ -1.86
C9orf40Q8IXQ3 NCAPGP1-201ENST00000505112 1814 ntBASIC3.4□□□□□ -1.86
C9orf40Q8IXQ3 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC3.4□□□□□ -1.86
C9orf40Q8IXQ3 ADGRL2-207ENST00000370723 5254 ntTSL 5 BASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 CSN1S1-201ENST00000246891 985 ntAPPRIS P3 TSL 1 (best) BASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 OR1L1-201ENST00000309623 933 ntAPPRIS P1 BASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 SNORA62.3-201ENST00000365110 153 ntBASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 OR1L1-202ENST00000373686 1083 ntBASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 CXorf65-201ENST00000374251 601 ntAPPRIS P1 TSL 5 BASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 MIR122-201ENST00000385044 85 ntBASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 HSPE1P8-201ENST00000406997 288 ntBASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 SNORA11-201ENST00000408789 128 ntBASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 RNU6ATAC34P-201ENST00000408879 121 ntBASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 ATP5A1P2-201ENST00000412323 255 ntBASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 BTF3P8-201ENST00000414577 526 ntBASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 USP9YP21-201ENST00000420603 432 ntBASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 RAB11AP1-201ENST00000442978 646 ntBASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 Z95327.1-201ENST00000446082 482 ntBASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 RPL21P71-201ENST00000465598 459 ntBASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 CFLAR-225ENST00000494258 693 ntTSL 3 BASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 HMGB1P21-201ENST00000502313 581 ntBASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 AC093903.1-201ENST00000507220 405 ntTSL 3 BASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 AC090071.1-201ENST00000507713 644 ntBASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 AC118282.2-201ENST00000508739 374 ntBASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 AC005798.1-201ENST00000513715 387 ntBASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 SNORA67.7-201ENST00000516664 135 ntBASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 RN7SKP82-201ENST00000516786 223 ntBASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 RNU6-1028P-201ENST00000517164 93 ntBASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 NDUFS5P6-201ENST00000529136 295 ntBASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 STX3-204ENST00000530221 534 ntTSL 5 BASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 AC092747.2-201ENST00000545069 983 ntBASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 AL161713.1-201ENST00000555538 145 ntBASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 GOLGA8M-203ENST00000568033 557 ntTSL 4 BASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 AC017100.2-201ENST00000584628 355 ntBASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 AC067852.4-201ENST00000590314 478 ntBASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 AP001542.2-201ENST00000593141 364 ntBASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 AL022067.1-201ENST00000602426 454 ntBASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 AL020997.3-201ENST00000602843 359 ntBASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 AC245389.1-201ENST00000605141 529 ntBASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 AP004247.3-201ENST00000608682 624 ntBASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 AL359535.1-201ENST00000612100 1087 ntBASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 AL391261.4-201ENST00000616012 481 ntBASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 AC006133.1-201ENST00000617106 264 ntBASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 VN1R7P-201ENST00000619242 903 ntBASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 AC084824.4-201ENST00000620106 731 ntBASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 AL161912.2-201ENST00000565707 3007 ntBASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.4□□□□□ -1.87
C9orf40Q8IXQ3 ZNF99-201ENST00000397104 3114 ntAPPRIS P1 TSL 5 BASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 KCNT2-202ENST00000367433 5883 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 ADGRL2-210ENST00000370728 6302 ntAPPRIS ALT2 TSL 5 BASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 ADGRL2-211ENST00000370730 6173 ntTSL 5 BASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 LINC00561-201ENST00000565815 2738 ntBASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 PRO1804-201ENST00000623780 2050 ntBASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 PPIP5K2-215ENST00000613674 4933 ntAPPRIS ALT2 TSL 2 BASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 MAP3K7-202ENST00000369325 4633 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 SNORA73.2-201ENST00000364946 201 ntBASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 HMGN2P8-201ENST00000391458 268 ntBASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 ATP5F1P4-201ENST00000397288 746 ntBASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 MTCO2P31-201ENST00000402702 684 ntBASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 RPL30P2-201ENST00000414021 291 ntBASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 SYF2P2-201ENST00000417620 583 ntBASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 TTC3-AS1-201ENST00000424733 1097 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 LINC01598-201ENST00000432067 460 ntTSL 3 BASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 C4orf26-202ENST00000435974 560 ntTSL 2 BASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 YWHAZP8-201ENST00000436935 731 ntBASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 MIR548XHG-203ENST00000437492 853 ntTSL 1 (best) BASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 AL139230.1-201ENST00000440094 425 ntTSL 3 BASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 AC064874.1-202ENST00000440101 287 ntTSL 3 BASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 RPS3AP46-201ENST00000448352 682 ntBASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 DNAJC19P1-201ENST00000455312 319 ntBASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 AC099563.1-201ENST00000456086 418 ntBASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 AC018635.1-201ENST00000468292 1030 ntBASIC3.39□□□□□ -1.87
C9orf40Q8IXQ3 AC073359.2-201ENST00000478814 351 ntTSL 3 BASIC3.39□□□□□ -1.87
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms