Protein–RNA interactions for Protein: Q86UA1

PRPF39, Pre-mRNA-processing factor 39, humanhuman

Known RBP Predictions only

Length 669 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39Q86UA1 AC012020.1-201ENST00000624541 1728 ntBASIC4.23□□□□□ -1.73
PRPF39Q86UA1 AC090337.1-201ENST00000579651 2074 ntBASIC4.23□□□□□ -1.73
PRPF39Q86UA1 ZNF678-202ENST00000397097 8212 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
PRPF39Q86UA1 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
PRPF39Q86UA1 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PRPF39Q86UA1 HGF-202ENST00000354224 1425 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PRPF39Q86UA1 JCHAIN-206ENST00000543780 1406 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PRPF39Q86UA1 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.22□□□□□ -1.73
PRPF39Q86UA1 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
PRPF39Q86UA1 CDH10-201ENST00000264463 3438 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PRPF39Q86UA1 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC4.22□□□□□ -1.73
PRPF39Q86UA1 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
PRPF39Q86UA1 XIAPP3-201ENST00000312918 795 ntBASIC4.22□□□□□ -1.73
PRPF39Q86UA1 MIR372-201ENST00000362225 67 ntBASIC4.22□□□□□ -1.73
PRPF39Q86UA1 RNA5SP283-201ENST00000365604 119 ntBASIC4.22□□□□□ -1.73
PRPF39Q86UA1 RNU6-339P-201ENST00000384310 107 ntBASIC4.22□□□□□ -1.73
PRPF39Q86UA1 RNU6-837P-201ENST00000391056 108 ntBASIC4.22□□□□□ -1.73
PRPF39Q86UA1 AL391839.1-201ENST00000417447 265 ntTSL 2 BASIC4.22□□□□□ -1.73
PRPF39Q86UA1 MRPS36P1-201ENST00000421291 307 ntBASIC4.22□□□□□ -1.73
PRPF39Q86UA1 MOB1AP1-201ENST00000430903 535 ntBASIC4.22□□□□□ -1.73
PRPF39Q86UA1 AC116035.1-201ENST00000431057 517 ntTSL 3 BASIC4.22□□□□□ -1.73
PRPF39Q86UA1 AC112715.1-201ENST00000445534 350 ntTSL 3 BASIC4.22□□□□□ -1.73
PRPF39Q86UA1 AL359073.1-201ENST00000448036 403 ntBASIC4.22□□□□□ -1.73
PRPF39Q86UA1 AL121877.1-201ENST00000453704 622 ntBASIC4.22□□□□□ -1.73
PRPF39Q86UA1 RPL5P32-201ENST00000454085 879 ntBASIC4.22□□□□□ -1.73
PRPF39Q86UA1 RNA5SP246-201ENST00000458909 119 ntBASIC4.22□□□□□ -1.73
PRPF39Q86UA1 PLGLA-201ENST00000465668 449 ntBASIC4.22□□□□□ -1.73
PRPF39Q86UA1 RPL23AP2-201ENST00000471227 466 ntBASIC4.22□□□□□ -1.73
PRPF39Q86UA1 AC108734.3-201ENST00000481241 1165 ntBASIC4.22□□□□□ -1.73
PRPF39Q86UA1 AC078817.1-201ENST00000492623 435 ntBASIC4.22□□□□□ -1.73
PRPF39Q86UA1 VWA8P1-201ENST00000510889 176 ntBASIC4.22□□□□□ -1.73
PRPF39Q86UA1 AP001207.2-201ENST00000519490 539 ntBASIC4.22□□□□□ -1.73
PRPF39Q86UA1 LINC01932-201ENST00000520323 573 ntTSL 5 BASIC4.22□□□□□ -1.73
PRPF39Q86UA1 AP005357.1-201ENST00000520749 476 ntTSL 3 BASIC4.22□□□□□ -1.73
PRPF39Q86UA1 AC127502.1-204ENST00000564861 618 ntTSL 3 BASIC4.22□□□□□ -1.73
PRPF39Q86UA1 AC076968.1-201ENST00000566418 429 ntTSL 5 BASIC4.22□□□□□ -1.73
PRPF39Q86UA1 AC138915.2-201ENST00000569776 97 ntBASIC4.22□□□□□ -1.73
PRPF39Q86UA1 MTND3P13-201ENST00000574391 343 ntBASIC4.22□□□□□ -1.73
PRPF39Q86UA1 AC022655.2-201ENST00000577280 318 ntBASIC4.22□□□□□ -1.73
PRPF39Q86UA1 AC022916.3-201ENST00000592961 742 ntBASIC4.22□□□□□ -1.73
PRPF39Q86UA1 VN1R83P-201ENST00000595685 445 ntBASIC4.22□□□□□ -1.73
PRPF39Q86UA1 AL022097.1-201ENST00000602500 806 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
PRPF39Q86UA1 AC144521.1-201ENST00000607148 956 ntBASIC4.22□□□□□ -1.73
PRPF39Q86UA1 AC073968.1-201ENST00000618594 637 ntBASIC4.22□□□□□ -1.73
PRPF39Q86UA1 MIR7702-201ENST00000621931 59 ntBASIC4.22□□□□□ -1.73
PRPF39Q86UA1 AL356121.2-201ENST00000624715 780 ntBASIC4.22□□□□□ -1.73
PRPF39Q86UA1 MCF2-201ENST00000338585 2826 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
PRPF39Q86UA1 MTND4P10-201ENST00000446199 1363 ntBASIC4.22□□□□□ -1.73
PRPF39Q86UA1 DOCK7-219ENST00000635253 6423 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.73
PRPF39Q86UA1 MARK2P15-201ENST00000432204 2186 ntBASIC4.21□□□□□ -1.73
PRPF39Q86UA1 TRAPPC13-208ENST00000505553 1410 ntAPPRIS ALT1 TSL 1 (best) BASIC4.21□□□□□ -1.73
PRPF39Q86UA1 OFD1P5Y-201ENST00000447585 2590 ntBASIC4.21□□□□□ -1.73
PRPF39Q86UA1 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC4.21□□□□□ -1.73
PRPF39Q86UA1 PDE1A-202ENST00000358139 2015 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
PRPF39Q86UA1 DSG2-AS1-202ENST00000583706 2024 ntTSL 5 BASIC4.21□□□□□ -1.74
PRPF39Q86UA1 ZNF705A-201ENST00000359286 3455 ntAPPRIS P1 TSL 2 BASIC4.21□□□□□ -1.74
PRPF39Q86UA1 RNA5SP130-201ENST00000364431 114 ntBASIC4.21□□□□□ -1.74
PRPF39Q86UA1 SNORD82-201ENST00000365530 70 ntBASIC4.21□□□□□ -1.74
PRPF39Q86UA1 RNU6-657P-201ENST00000383904 107 ntBASIC4.21□□□□□ -1.74
PRPF39Q86UA1 AL024474.1-201ENST00000404655 591 ntBASIC4.21□□□□□ -1.74
PRPF39Q86UA1 RNU2-42P-201ENST00000410697 113 ntBASIC4.21□□□□□ -1.74
PRPF39Q86UA1 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.21□□□□□ -1.74
PRPF39Q86UA1 AL078590.2-202ENST00000422736 568 ntTSL 3 BASIC4.21□□□□□ -1.74
PRPF39Q86UA1 LINC01445-201ENST00000426205 812 ntTSL 3 BASIC4.21□□□□□ -1.74
PRPF39Q86UA1 AC023590.1-205ENST00000430457 676 ntTSL 3 BASIC4.21□□□□□ -1.74
PRPF39Q86UA1 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC4.21□□□□□ -1.74
PRPF39Q86UA1 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.21□□□□□ -1.74
PRPF39Q86UA1 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC4.21□□□□□ -1.74
PRPF39Q86UA1 AL031313.1-201ENST00000448435 256 ntBASIC4.21□□□□□ -1.74
PRPF39Q86UA1 AL162151.2-201ENST00000448875 158 ntBASIC4.21□□□□□ -1.74
PRPF39Q86UA1 GJE1-201ENST00000450456 916 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
PRPF39Q86UA1 RAD23BP3-201ENST00000454157 1152 ntBASIC4.21□□□□□ -1.74
PRPF39Q86UA1 AL133477.1-201ENST00000457472 514 ntBASIC4.21□□□□□ -1.74
PRPF39Q86UA1 OR4G11P-201ENST00000492842 939 ntBASIC4.21□□□□□ -1.74
PRPF39Q86UA1 AC093767.1-201ENST00000504523 156 ntBASIC4.21□□□□□ -1.74
PRPF39Q86UA1 AL159163.1-201ENST00000507747 600 ntAPPRIS P1 TSL 5 BASIC4.21□□□□□ -1.74
PRPF39Q86UA1 AC113420.1-201ENST00000507903 571 ntBASIC4.21□□□□□ -1.74
PRPF39Q86UA1 RNU4ATAC6P-201ENST00000516592 126 ntBASIC4.21□□□□□ -1.74
PRPF39Q86UA1 AC022784.3-202ENST00000517816 826 ntTSL 3 BASIC4.21□□□□□ -1.74
PRPF39Q86UA1 AC087808.1-201ENST00000520501 361 ntBASIC4.21□□□□□ -1.74
PRPF39Q86UA1 OR4A12P-201ENST00000530847 918 ntBASIC4.21□□□□□ -1.74
PRPF39Q86UA1 AL160314.2-204ENST00000554730 380 ntTSL 5 BASIC4.21□□□□□ -1.74
PRPF39Q86UA1 LINC02126-202ENST00000563754 750 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
PRPF39Q86UA1 AL157402.2-201ENST00000566394 416 ntTSL 3 BASIC4.21□□□□□ -1.74
PRPF39Q86UA1 AMZ2-204ENST00000577273 895 ntTSL 5 BASIC4.21□□□□□ -1.74
PRPF39Q86UA1 AP001021.1-201ENST00000577704 244 ntTSL 3 BASIC4.21□□□□□ -1.74
PRPF39Q86UA1 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC4.21□□□□□ -1.74
PRPF39Q86UA1 AL669831.4-202ENST00000590817 238 ntBASIC4.21□□□□□ -1.74
PRPF39Q86UA1 AC091057.3-201ENST00000602684 733 ntBASIC4.21□□□□□ -1.74
PRPF39Q86UA1 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC4.21□□□□□ -1.74
PRPF39Q86UA1 AC231759.1-201ENST00000616455 597 ntBASIC4.21□□□□□ -1.74
PRPF39Q86UA1 Xist_exon1.1-201ENST00000618930 85 ntBASIC4.21□□□□□ -1.74
PRPF39Q86UA1 AC009318.4-201ENST00000620496 486 ntBASIC4.21□□□□□ -1.74
PRPF39Q86UA1 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC4.21□□□□□ -1.74
PRPF39Q86UA1 SLC16A7-201ENST00000261187 11777 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.74
PRPF39Q86UA1 PCDH15-234ENST00000622048 6820 ntTSL 5 BASIC4.21□□□□□ -1.74
PRPF39Q86UA1 DAZ4-202ENST00000382314 3910 ntAPPRIS ALT2 TSL 5 BASIC4.21□□□□□ -1.74
PRPF39Q86UA1 FMN2-207ENST00000545751 1913 ntTSL 5 BASIC4.21□□□□□ -1.74
PRPF39Q86UA1 RRAS2-202ENST00000414023 1884 ntTSL 2 BASIC4.2□□□□□ -1.74
PRPF39Q86UA1 IQCH-206ENST00000546225 3112 ntTSL 5 BASIC4.2□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 124.8 ms