Protein–RNA interactions for Protein: Q7Z6J8

UBE3D, E3 ubiquitin-protein ligase E3D, humanhuman

Predictions only

Length 389 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3DQ7Z6J8 AC004990.1-201ENST00000431722 564 ntTSL 4 BASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 SUMO2P3-201ENST00000438311 288 ntBASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 AC108059.3-201ENST00000456388 214 ntBASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 RNU6-333P-201ENST00000459117 107 ntBASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 AL049714.1-201ENST00000466686 347 ntBASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 AC094085.1-201ENST00000468914 584 ntBASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 MTND4P17-201ENST00000470444 350 ntBASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 TAF8-207ENST00000482432 556 ntTSL 2 BASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 FTH1P21-201ENST00000512179 511 ntBASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 TTC39CP1-201ENST00000512513 755 ntBASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 GAPDHP62-201ENST00000515313 990 ntBASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 RNU6-864P-201ENST00000516256 108 ntBASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 RNA5SP92-201ENST00000516437 110 ntBASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 AP004609.2-201ENST00000532177 190 ntBASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 AC018630.1-201ENST00000541376 925 ntBASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 AC068993.1-201ENST00000546724 589 ntBASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 LSM3P2-201ENST00000551246 273 ntBASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 AL163195.3-202ENST00000555283 578 ntAPPRIS P1 TSL 4 BASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 AL133371.2-201ENST00000556624 294 ntTSL 3 BASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 AC027130.1-201ENST00000564490 686 ntTSL 2 BASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 AC090617.5-201ENST00000571815 528 ntTSL 3 BASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 AC019322.1-201ENST00000571869 389 ntBASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 AC060771.1-201ENST00000582031 164 ntBASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 MIR3668-201ENST00000582138 75 ntBASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 AC025857.2-201ENST00000602711 238 ntBASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 AC084781.2-201ENST00000615568 161 ntBASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 AC008781.3-201ENST00000622826 335 ntTSL 2 BASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 AC000123.2-201ENST00000623124 461 ntBASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 PIGX-210ENST00000639143 831 ntAPPRIS ALT2 TSL 2 BASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 GVQW2-203ENST00000641401 327 ntAPPRIS P1 BASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 ZC3H14-201ENST00000251038 18281 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 HHLA2-209ENST00000489514 2406 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 DGKB-203ENST00000403951 6917 ntAPPRIS P2 TSL 5 BASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 HEATR1-203ENST00000366582 8447 ntAPPRIS P1 TSL 5 BASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 CD36-221ENST00000534394 1741 ntTSL 2 BASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 ZNF682-207ENST00000595736 1710 ntTSL 2 BASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 AC007342.5-201ENST00000571340 2142 ntBASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 AC004076.2-201ENST00000620532 3323 ntBASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 TGIF1-208ENST00000472042 2214 ntTSL 2 BASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 AL445437.1-201ENST00000623157 3087 ntBASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 AC091045.1-201ENST00000561460 2277 ntTSL 5 BASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 ZNF345-215ENST00000614069 3103 ntAPPRIS P1 TSL 3 BASIC5.39□□□□□ -1.55
UBE3DQ7Z6J8 ROR1-204ENST00000545203 5362 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 MTND5P28-201ENST00000438005 1594 ntBASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 SEC31A-226ENST00000508479 3397 ntTSL 2 BASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 AC011978.2-201ENST00000569835 2054 ntBASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 HSPA13-201ENST00000285667 3986 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 AC004656.1-201ENST00000568479 4951 ntBASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 AC067945.1-201ENST00000342609 618 ntBASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 SSX5-202ENST00000347757 1261 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 U3.11-201ENST00000364476 212 ntBASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 RNU6-522P-201ENST00000364497 107 ntBASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 Y_RNA.301-201ENST00000364990 103 ntBASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 Y_RNA.414-201ENST00000384011 101 ntBASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 RNA5SP345-201ENST00000410646 108 ntBASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 OR6C66P-201ENST00000414917 930 ntBASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 AC093155.2-201ENST00000420734 937 ntBASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 LINC01344-201ENST00000420760 261 ntTSL 3 BASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 RPL36P19-201ENST00000430744 301 ntBASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 LINC01317-202ENST00000442026 677 ntTSL 3 BASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 AC073109.1-201ENST00000445066 978 ntBASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 AL161722.1-201ENST00000446972 1032 ntBASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 AL591504.1-201ENST00000450681 414 ntTSL 3 BASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 AL445665.1-202ENST00000452436 324 ntBASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 VN1R17P-201ENST00000472048 1090 ntBASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 ANKRD7-204ENST00000477532 744 ntTSL 5 BASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 AC105914.2-201ENST00000507525 233 ntTSL 3 BASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 B4GALNT2P1-201ENST00000508857 307 ntBASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 AC091906.1-201ENST00000511310 391 ntTSL 2 BASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 AC022634.1-201ENST00000520765 532 ntBASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 SUMO2P20-201ENST00000520803 283 ntBASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 LINC02157-201ENST00000558885 447 ntTSL 5 BASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 AC137800.1-201ENST00000562976 573 ntTSL 4 BASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 AP001029.3-201ENST00000588063 596 ntBASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 MIR6778-201ENST00000617912 73 ntBASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 AL159972.1-201ENST00000625150 448 ntBASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 AL133216.2-202ENST00000634512 349 ntBASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 AP000550.3-201ENST00000637734 379 ntBASIC5.38□□□□□ -1.55
UBE3DQ7Z6J8 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC5.38□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 199.8 ms