Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 RNU6-619P-201ENST00000365146 108 ntBASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 RNY3P14-201ENST00000384309 102 ntBASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 MIR16-1-201ENST00000385271 89 ntBASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 SPRR2A-201ENST00000392653 709 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 SNORA11C-201ENST00000408532 129 ntBASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 RN7SKP247-201ENST00000411094 308 ntBASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 AL589642.2-201ENST00000413291 839 ntTSL 3 BASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 AL161631.1-201ENST00000417933 486 ntBASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 GRK5-IT1-201ENST00000421206 400 ntTSL 3 BASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 RBMY1KP-201ENST00000423480 476 ntBASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 AC005009.1-201ENST00000423979 269 ntTSL 2 BASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 BBS9-205ENST00000425508 1252 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 AL732292.1-201ENST00000426692 226 ntBASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 Z93242.1-201ENST00000427102 353 ntBASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 USP9YP35-201ENST00000435696 412 ntBASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 LARP1BP3-201ENST00000437229 869 ntBASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 LINC02195-201ENST00000443373 294 ntTSL 3 BASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 AC093392.2-201ENST00000450682 337 ntBASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 AC116337.2-201ENST00000477662 156 ntBASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 VPS26AP1-201ENST00000483197 979 ntBASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 NIP7P2-201ENST00000485801 544 ntBASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 MTAPP1-201ENST00000489154 819 ntBASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 AC006499.5-201ENST00000505037 514 ntBASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 AC108475.1-201ENST00000507880 950 ntBASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 AC117460.1-201ENST00000508964 467 ntTSL 3 BASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 PGBD4P4-201ENST00000509673 613 ntBASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 FABP5P5-201ENST00000515537 406 ntBASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 RNA5SP228-201ENST00000516232 133 ntBASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 AC133634.1-201ENST00000517695 566 ntTSL 3 BASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 OSBPL9P2-201ENST00000526582 1228 ntBASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 LINC02384-206ENST00000541707 904 ntTSL 3 BASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 AC069240.1-201ENST00000548774 375 ntBASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 AL137129.1-201ENST00000555937 720 ntTSL 4 BASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 AP005205.1-201ENST00000563503 508 ntBASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 AC068135.2-201ENST00000569293 1028 ntBASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 SS18L2P2-201ENST00000583960 235 ntBASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 AC234771.5-201ENST00000600161 514 ntBASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 MIR432-201ENST00000606207 94 ntBASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 AC064801.1-201ENST00000612025 407 ntBASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 AL357080.1-201ENST00000617394 239 ntBASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 AC069209.1-201ENST00000619282 651 ntBASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 AC140479.6-201ENST00000633535 357 ntBASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 POU2F1-204ENST00000367866 13905 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 EMB-205ENST00000514111 1475 ntAPPRIS ALT2 TSL 2 BASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 EMCN-202ENST00000305864 1575 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 NEK11-207ENST00000508196 1938 ntAPPRIS P3 TSL 2 BASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 ASAH1-265ENST00000637922 2297 ntTSL 5 BASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
ZNF549Q6P9A3 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 MBD5-202ENST00000407073 9512 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 PRR4-201ENST00000228811 563 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 DEFB128-201ENST00000334391 373 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 MIR448-201ENST00000362131 111 ntBASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 RNU6-666P-201ENST00000363499 107 ntBASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 RNA5SP447-201ENST00000363749 119 ntBASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 SNORA4.1-201ENST00000364263 144 ntBASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 SNAPC3-201ENST00000380799 753 ntTSL 3 BASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 RNU6-253P-201ENST00000384730 105 ntBASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 MIR525-201ENST00000384978 85 ntBASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 MTCO3P31-201ENST00000405526 789 ntBASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 RAP1BP3-201ENST00000407180 549 ntBASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 RN7SKP235-201ENST00000410662 305 ntBASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 ELOCP19-201ENST00000411919 318 ntBASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 AL645937.4-201ENST00000419702 389 ntTSL 2 BASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 FNDC3CP-201ENST00000420795 1155 ntBASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 AC104651.1-201ENST00000427559 735 ntBASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 AL050321.1-201ENST00000432363 400 ntBASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 SEPT7P5-201ENST00000434048 306 ntBASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 CEACAMP1-201ENST00000434624 1035 ntBASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 RPS25P9-201ENST00000435591 252 ntBASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 EPS15P1-201ENST00000448836 336 ntBASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 RPL36AP33-201ENST00000450395 310 ntBASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 AC068707.1-201ENST00000451438 391 ntTSL 3 BASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 AL031668.1-201ENST00000451556 603 ntTSL 3 BASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 RBBP6-204ENST00000452655 854 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 RPL5P30-201ENST00000465511 891 ntBASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 AC096741.1-201ENST00000472250 846 ntBASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 RN7SL810P-201ENST00000493031 276 ntBASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 RN7SL691P-201ENST00000494487 301 ntBASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 AC008572.1-201ENST00000507269 442 ntTSL 5 BASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 AC097478.1-202ENST00000508021 567 ntTSL 4 BASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 AC104663.1-201ENST00000508555 557 ntTSL 2 BASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 AC145141.2-201ENST00000518473 501 ntTSL 3 BASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 AC107373.1-201ENST00000522570 603 ntTSL 3 BASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC4.22□□□□□ -1.73
ZNF549Q6P9A3 AC008083.2-201ENST00000546707 476 ntBASIC4.22□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms