Protein–RNA interactions for Protein: Q5TC82

RC3H1, Roquin-1, humanhuman

Known RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RC3H1Q5TC82 RPS29P22-201ENST00000472363 168 ntBASIC7.03□□□□□ -1.28
RC3H1Q5TC82 AC015724.1-201ENST00000478577 156 ntBASIC7.03□□□□□ -1.28
RC3H1Q5TC82 MORC1-AS1-201ENST00000480826 564 ntTSL 2 BASIC7.03□□□□□ -1.28
RC3H1Q5TC82 AL035404.1-201ENST00000497982 568 ntBASIC7.03□□□□□ -1.28
RC3H1Q5TC82 AC016651.1-201ENST00000502680 822 ntTSL 3 BASIC7.03□□□□□ -1.28
RC3H1Q5TC82 LINC01181-201ENST00000503718 556 ntTSL 4 BASIC7.03□□□□□ -1.28
RC3H1Q5TC82 AC109454.3-201ENST00000512748 669 ntTSL 3 BASIC7.03□□□□□ -1.28
RC3H1Q5TC82 RN7SKP24-201ENST00000515888 284 ntBASIC7.03□□□□□ -1.28
RC3H1Q5TC82 UQCRB-202ENST00000517523 515 ntTSL 2 BASIC7.03□□□□□ -1.28
RC3H1Q5TC82 AC091053.2-201ENST00000534169 537 ntTSL 4 BASIC7.03□□□□□ -1.28
RC3H1Q5TC82 AC123904.2-201ENST00000548059 300 ntBASIC7.03□□□□□ -1.28
RC3H1Q5TC82 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC7.03□□□□□ -1.28
RC3H1Q5TC82 AC011447.4-201ENST00000587562 111 ntBASIC7.03□□□□□ -1.28
RC3H1Q5TC82 AC098848.2-201ENST00000588023 330 ntBASIC7.03□□□□□ -1.28
RC3H1Q5TC82 AC009271.1-202ENST00000588803 492 ntTSL 3 BASIC7.03□□□□□ -1.28
RC3H1Q5TC82 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC7.03□□□□□ -1.28
RC3H1Q5TC82 IGLCOR22-2-201ENST00000605398 313 ntBASIC7.03□□□□□ -1.28
RC3H1Q5TC82 ESRRAP2-204ENST00000606337 280 ntTSL 5 BASIC7.03□□□□□ -1.28
RC3H1Q5TC82 AL355810.1-201ENST00000614629 552 ntBASIC7.03□□□□□ -1.28
RC3H1Q5TC82 ANO4-202ENST00000392979 3909 ntAPPRIS P3 TSL 2 BASIC7.03□□□□□ -1.28
RC3H1Q5TC82 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC7.03□□□□□ -1.28
RC3H1Q5TC82 ZFYVE9-202ENST00000357206 4567 ntAPPRIS ALT1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RC3H1Q5TC82 GALNT5-201ENST00000259056 6171 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RC3H1Q5TC82 ZNF793-202ENST00000542455 4073 ntTSL 5 BASIC7.03□□□□□ -1.28
RC3H1Q5TC82 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RC3H1Q5TC82 MTND5P28-201ENST00000438005 1594 ntBASIC7.03□□□□□ -1.28
RC3H1Q5TC82 NUP107-211ENST00000539906 3004 ntTSL 2 BASIC7.03□□□□□ -1.28
RC3H1Q5TC82 IFRD1-217ENST00000621379 3232 ntTSL 2 BASIC7.03□□□□□ -1.28
RC3H1Q5TC82 GRIA4-204ENST00000428631 2778 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RC3H1Q5TC82 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC7.03□□□□□ -1.28
RC3H1Q5TC82 RGS21-201ENST00000417209 1794 ntAPPRIS P1 TSL 1 (best) BASIC7.03□□□□□ -1.28
RC3H1Q5TC82 SDC2-204ENST00000519914 1318 ntTSL 2 BASIC7.02□□□□□ -1.28
RC3H1Q5TC82 TTC39B-207ENST00000507993 1950 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
RC3H1Q5TC82 SLAMF6-202ENST00000368057 2712 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
RC3H1Q5TC82 NDRG3-202ENST00000359675 2917 ntAPPRIS ALT1 TSL 1 (best) BASIC7.02□□□□□ -1.29
RC3H1Q5TC82 SAMD9L-202ENST00000411955 5831 ntAPPRIS P1 TSL 5 BASIC7.02□□□□□ -1.29
RC3H1Q5TC82 CCDC158-202ENST00000434846 1728 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
RC3H1Q5TC82 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
RC3H1Q5TC82 LRRC37A16P-202ENST00000586022 3725 ntBASIC7.02□□□□□ -1.29
RC3H1Q5TC82 Y_RNA.117-201ENST00000363294 101 ntBASIC7.02□□□□□ -1.29
RC3H1Q5TC82 RNU6-115P-201ENST00000364310 107 ntBASIC7.02□□□□□ -1.29
RC3H1Q5TC82 Y_RNA.530-201ENST00000384587 101 ntBASIC7.02□□□□□ -1.29
RC3H1Q5TC82 AL360271.1-201ENST00000395679 510 ntBASIC7.02□□□□□ -1.29
RC3H1Q5TC82 AL590609.2-201ENST00000421430 368 ntBASIC7.02□□□□□ -1.29
RC3H1Q5TC82 AL353608.2-201ENST00000425587 340 ntTSL 5 BASIC7.02□□□□□ -1.29
RC3H1Q5TC82 ARL5AP4-201ENST00000430731 512 ntBASIC7.02□□□□□ -1.29
RC3H1Q5TC82 RPL23AP50-201ENST00000434149 455 ntBASIC7.02□□□□□ -1.29
RC3H1Q5TC82 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC7.02□□□□□ -1.29
RC3H1Q5TC82 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC7.02□□□□□ -1.29
RC3H1Q5TC82 RPL21P23-201ENST00000446654 460 ntBASIC7.02□□□□□ -1.29
RC3H1Q5TC82 RNU7-136P-201ENST00000458819 69 ntBASIC7.02□□□□□ -1.29
RC3H1Q5TC82 AC023818.1-201ENST00000498379 384 ntBASIC7.02□□□□□ -1.29
RC3H1Q5TC82 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC7.02□□□□□ -1.29
RC3H1Q5TC82 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC7.02□□□□□ -1.29
RC3H1Q5TC82 AC008652.1-201ENST00000505261 469 ntTSL 3 BASIC7.02□□□□□ -1.29
RC3H1Q5TC82 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC7.02□□□□□ -1.29
RC3H1Q5TC82 RNU6-1088P-201ENST00000516850 104 ntBASIC7.02□□□□□ -1.29
RC3H1Q5TC82 AP001804.3-201ENST00000525146 880 ntBASIC7.02□□□□□ -1.29
RC3H1Q5TC82 MS4A7-208ENST00000530234 730 ntTSL 3 BASIC7.02□□□□□ -1.29
RC3H1Q5TC82 AC009803.2-201ENST00000550378 665 ntTSL 5 BASIC7.02□□□□□ -1.29
RC3H1Q5TC82 DPP8-210ENST00000559233 2953 ntAPPRIS P4 TSL 2 BASIC7.02□□□□□ -1.29
RC3H1Q5TC82 AC074052.2-201ENST00000562516 214 ntTSL 3 BASIC7.02□□□□□ -1.29
RC3H1Q5TC82 RPL10P14-201ENST00000565265 298 ntBASIC7.02□□□□□ -1.29
RC3H1Q5TC82 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC7.02□□□□□ -1.29
RC3H1Q5TC82 MIR5186-201ENST00000577504 120 ntBASIC7.02□□□□□ -1.29
RC3H1Q5TC82 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC7.02□□□□□ -1.29
RC3H1Q5TC82 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC7.02□□□□□ -1.29
RC3H1Q5TC82 MIR4480-201ENST00000582492 71 ntBASIC7.02□□□□□ -1.29
RC3H1Q5TC82 AC090312.2-201ENST00000582687 378 ntBASIC7.02□□□□□ -1.29
RC3H1Q5TC82 MIR3942-201ENST00000585264 109 ntBASIC7.02□□□□□ -1.29
RC3H1Q5TC82 LINC01515-204ENST00000595269 402 ntTSL 5 BASIC7.02□□□□□ -1.29
RC3H1Q5TC82 AC121334.2-201ENST00000605387 271 ntBASIC7.02□□□□□ -1.29
RC3H1Q5TC82 OR10AB1P-201ENST00000609613 938 ntBASIC7.02□□□□□ -1.29
RC3H1Q5TC82 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
RC3H1Q5TC82 AC091953.2-201ENST00000623979 160 ntBASIC7.02□□□□□ -1.29
RC3H1Q5TC82 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
RC3H1Q5TC82 PTPRB-210ENST00000551525 5291 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
RC3H1Q5TC82 OR10A6-203ENST00000641238 6052 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
RC3H1Q5TC82 TEAD1-203ENST00000526600 8477 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
RC3H1Q5TC82 RUBCNL-205ENST00000389908 3956 ntAPPRIS P3 TSL 2 BASIC7.02□□□□□ -1.29
RC3H1Q5TC82 OR52A5-202ENST00000642125 3993 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
RC3H1Q5TC82 PLSCR5-201ENST00000443512 1969 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
RC3H1Q5TC82 ZNF607-202ENST00000395835 4003 ntAPPRIS ALT2 TSL 2 BASIC7.02□□□□□ -1.29
RC3H1Q5TC82 PTPRZ1-202ENST00000449182 4627 ntAPPRIS ALT2 TSL 1 (best) BASIC7.02□□□□□ -1.29
RC3H1Q5TC82 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC7.01□□□□□ -1.29
RC3H1Q5TC82 ALB-219ENST00000621085 1418 ntTSL 5 BASIC7.01□□□□□ -1.29
RC3H1Q5TC82 FASTKD2-203ENST00000403094 2344 ntAPPRIS P1 TSL 5 BASIC7.01□□□□□ -1.29
RC3H1Q5TC82 GPX8-201ENST00000296734 3245 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
RC3H1Q5TC82 SSH2-204ENST00000540801 4538 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
RC3H1Q5TC82 ZNF480-205ENST00000595962 4738 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
RC3H1Q5TC82 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC7.01□□□□□ -1.29
RC3H1Q5TC82 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC7.01□□□□□ -1.29
RC3H1Q5TC82 TTC8-217ENST00000622513 5270 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RC3H1Q5TC82 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC7.01□□□□□ -1.29
RC3H1Q5TC82 XKR3-201ENST00000331428 1690 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
RC3H1Q5TC82 SNORA17.1-201ENST00000362945 126 ntBASIC7.01□□□□□ -1.29
RC3H1Q5TC82 SAR1A-201ENST00000373236 437 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
RC3H1Q5TC82 RNU1-149P-201ENST00000390870 161 ntBASIC7.01□□□□□ -1.29
RC3H1Q5TC82 RNU6ATAC21P-201ENST00000408656 126 ntBASIC7.01□□□□□ -1.29
RC3H1Q5TC82 AC109779.1-201ENST00000414475 573 ntTSL 5 BASIC7.01□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 127.9 ms