Protein–RNA interactions for Protein: Q2UY09

COL28A1, Collagen alpha-1(XXVIII) chain, humanhuman

Predictions only

Length 1,125 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL28A1Q2UY09 AC069304.2-201ENST00000605154 435 ntBASIC4.25□□□□□ -1.73
COL28A1Q2UY09 AL451086.1-201ENST00000605596 223 ntBASIC4.25□□□□□ -1.73
COL28A1Q2UY09 FSBP-203ENST00000611249 2181 ntAPPRIS P1 TSL 5 BASIC4.25□□□□□ -1.73
COL28A1Q2UY09 AC096577.2-201ENST00000611455 153 ntBASIC4.25□□□□□ -1.73
COL28A1Q2UY09 AC069209.1-201ENST00000619282 651 ntBASIC4.25□□□□□ -1.73
COL28A1Q2UY09 MIR8059-201ENST00000620427 81 ntBASIC4.25□□□□□ -1.73
COL28A1Q2UY09 MIR7154-201ENST00000620673 73 ntBASIC4.25□□□□□ -1.73
COL28A1Q2UY09 AC007490.1-201ENST00000624321 703 ntBASIC4.25□□□□□ -1.73
COL28A1Q2UY09 AC017037.3-201ENST00000625016 472 ntBASIC4.25□□□□□ -1.73
COL28A1Q2UY09 COA1-220ENST00000640232 192 ntAPPRIS ALT2 TSL 3 BASIC4.25□□□□□ -1.73
COL28A1Q2UY09 C21orf91-201ENST00000284881 5433 ntAPPRIS P4 TSL 2 BASIC4.25□□□□□ -1.73
COL28A1Q2UY09 AC079062.1-203ENST00000581862 3610 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL28A1Q2UY09 MYB-213ENST00000525369 2866 ntTSL 1 (best) BASIC4.25□□□□□ -1.73
COL28A1Q2UY09 ELL2P4-201ENST00000446870 1376 ntBASIC4.25□□□□□ -1.73
COL28A1Q2UY09 ORC3-201ENST00000257789 2501 ntAPPRIS P3 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL28A1Q2UY09 ADGRL2-201ENST00000319517 5479 ntAPPRIS P2 TSL 1 (best) BASIC4.25□□□□□ -1.73
COL28A1Q2UY09 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.24□□□□□ -1.73
COL28A1Q2UY09 LINC02456-201ENST00000635615 1323 ntTSL 5 BASIC4.24□□□□□ -1.73
COL28A1Q2UY09 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC4.24□□□□□ -1.73
COL28A1Q2UY09 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COL28A1Q2UY09 SUPT16HP1-201ENST00000537175 3133 ntBASIC4.24□□□□□ -1.73
COL28A1Q2UY09 CD2-201ENST00000369477 478 ntTSL 2 BASIC4.24□□□□□ -1.73
COL28A1Q2UY09 OR6C3-201ENST00000379667 936 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
COL28A1Q2UY09 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC4.24□□□□□ -1.73
COL28A1Q2UY09 ZNF603P-201ENST00000405613 487 ntBASIC4.24□□□□□ -1.73
COL28A1Q2UY09 TANK-206ENST00000406287 875 ntTSL 5 BASIC4.24□□□□□ -1.73
COL28A1Q2UY09 AL133480.1-201ENST00000411561 638 ntTSL 2 BASIC4.24□□□□□ -1.73
COL28A1Q2UY09 OR8G2P-201ENST00000412796 908 ntBASIC4.24□□□□□ -1.73
COL28A1Q2UY09 RPL31P2-201ENST00000413849 377 ntBASIC4.24□□□□□ -1.73
COL28A1Q2UY09 LINC01318-201ENST00000423593 597 ntTSL 4 BASIC4.24□□□□□ -1.73
COL28A1Q2UY09 AC008065.1-201ENST00000428525 348 ntBASIC4.24□□□□□ -1.73
COL28A1Q2UY09 YWHAZP7-201ENST00000436906 631 ntBASIC4.24□□□□□ -1.73
COL28A1Q2UY09 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC4.24□□□□□ -1.73
COL28A1Q2UY09 AP000844.1-201ENST00000446631 577 ntTSL 3 BASIC4.24□□□□□ -1.73
COL28A1Q2UY09 SAMSN1-AS1-201ENST00000449214 840 ntTSL 3 BASIC4.24□□□□□ -1.73
COL28A1Q2UY09 LINC00456-201ENST00000453862 692 ntTSL 3 BASIC4.24□□□□□ -1.73
COL28A1Q2UY09 GRM7-AS3-208ENST00000455623 947 ntTSL 3 BASIC4.24□□□□□ -1.73
COL28A1Q2UY09 MTND1P16-201ENST00000465177 898 ntBASIC4.24□□□□□ -1.73
COL28A1Q2UY09 AC013828.1-201ENST00000481845 158 ntBASIC4.24□□□□□ -1.73
COL28A1Q2UY09 ALDH7A1P3-201ENST00000492517 345 ntBASIC4.24□□□□□ -1.73
COL28A1Q2UY09 MND1-203ENST00000504860 638 ntTSL 1 (best) BASIC4.24□□□□□ -1.73
COL28A1Q2UY09 AC093895.1-203ENST00000506814 591 ntTSL 5 BASIC4.24□□□□□ -1.73
COL28A1Q2UY09 AC093725.2-201ENST00000507808 356 ntTSL 2 BASIC4.24□□□□□ -1.73
COL28A1Q2UY09 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC4.24□□□□□ -1.73
COL28A1Q2UY09 AF186190.1-201ENST00000517470 480 ntBASIC4.24□□□□□ -1.73
COL28A1Q2UY09 AC015468.3-201ENST00000518967 417 ntTSL 2 BASIC4.24□□□□□ -1.73
COL28A1Q2UY09 AC025437.3-201ENST00000523178 771 ntTSL 5 BASIC4.24□□□□□ -1.73
COL28A1Q2UY09 AP003461.1-201ENST00000528866 78 ntBASIC4.24□□□□□ -1.73
COL28A1Q2UY09 REXO2-218ENST00000544827 880 ntTSL 3 BASIC4.24□□□□□ -1.73
COL28A1Q2UY09 AC069240.1-201ENST00000548774 375 ntBASIC4.24□□□□□ -1.73
COL28A1Q2UY09 AC087399.1-201ENST00000579769 573 ntTSL 4 BASIC4.24□□□□□ -1.73
COL28A1Q2UY09 AC011524.1-201ENST00000590167 240 ntTSL 3 BASIC4.24□□□□□ -1.73
COL28A1Q2UY09 WDR7-OT1-201ENST00000592032 565 ntTSL 4 BASIC4.24□□□□□ -1.73
COL28A1Q2UY09 AC008751.2-201ENST00000597885 980 ntBASIC4.24□□□□□ -1.73
COL28A1Q2UY09 AC021171.1-201ENST00000603137 706 ntBASIC4.24□□□□□ -1.73
COL28A1Q2UY09 AC113194.1-201ENST00000606037 500 ntBASIC4.24□□□□□ -1.73
COL28A1Q2UY09 AC131235.4-201ENST00000609288 620 ntBASIC4.24□□□□□ -1.73
COL28A1Q2UY09 AC097478.4-201ENST00000615968 522 ntTSL 5 BASIC4.24□□□□□ -1.73
COL28A1Q2UY09 AL138721.1-201ENST00000616756 179 ntBASIC4.24□□□□□ -1.73
COL28A1Q2UY09 AC131238.1-201ENST00000617135 328 ntBASIC4.24□□□□□ -1.73
COL28A1Q2UY09 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC4.24□□□□□ -1.73
COL28A1Q2UY09 PLCE1-AS2-213ENST00000620469 432 ntTSL 5 BASIC4.24□□□□□ -1.73
COL28A1Q2UY09 AL357559.1-201ENST00000622228 274 ntBASIC4.24□□□□□ -1.73
COL28A1Q2UY09 AC140479.6-201ENST00000633535 357 ntBASIC4.24□□□□□ -1.73
COL28A1Q2UY09 AC116618.1-201ENST00000634617 774 ntBASIC4.24□□□□□ -1.73
COL28A1Q2UY09 CAPZA2-215ENST00000639546 129 ntTSL 5 BASIC4.24□□□□□ -1.73
COL28A1Q2UY09 UGT2B4-207ENST00000639621 1154 ntTSL 5 BASIC4.24□□□□□ -1.73
COL28A1Q2UY09 ARL15-202ENST00000504924 2486 ntAPPRIS P2 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL28A1Q2UY09 ARL15-207ENST00000620747 2486 ntAPPRIS ALT1 TSL 5 BASIC4.24□□□□□ -1.73
COL28A1Q2UY09 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC4.24□□□□□ -1.73
COL28A1Q2UY09 ABI3BP-206ENST00000471714 6783 ntAPPRIS ALT2 TSL 5 BASIC4.24□□□□□ -1.73
COL28A1Q2UY09 EIF2AP4-201ENST00000424793 1781 ntBASIC4.24□□□□□ -1.73
COL28A1Q2UY09 OR2L5-201ENST00000355281 2429 ntAPPRIS P1 BASIC4.24□□□□□ -1.73
COL28A1Q2UY09 DDX4-204ENST00000505374 2884 ntAPPRIS P1 TSL 1 (best) BASIC4.24□□□□□ -1.73
COL28A1Q2UY09 LINC00561-201ENST00000565815 2738 ntBASIC4.23□□□□□ -1.73
COL28A1Q2UY09 AL672167.1-203ENST00000641299 2975 ntBASIC4.23□□□□□ -1.73
COL28A1Q2UY09 CNTD1-205ENST00000588527 1308 ntTSL 2 BASIC4.23□□□□□ -1.73
COL28A1Q2UY09 RNMT-203ENST00000543302 1849 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL28A1Q2UY09 KLRD1-204ENST00000381908 15549 ntAPPRIS P4 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL28A1Q2UY09 MAPK10-206ENST00000395161 4186 ntTSL 5 BASIC4.23□□□□□ -1.73
COL28A1Q2UY09 AL133243.3-201ENST00000617415 3004 ntBASIC4.23□□□□□ -1.73
COL28A1Q2UY09 PTPN12-206ENST00000435495 2526 ntTSL 2 BASIC4.23□□□□□ -1.73
COL28A1Q2UY09 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.23□□□□□ -1.73
COL28A1Q2UY09 MTRNR2L7-201ENST00000544824 1535 ntAPPRIS P1 BASIC4.23□□□□□ -1.73
COL28A1Q2UY09 TLR3-201ENST00000296795 6015 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
COL28A1Q2UY09 CGA-201ENST00000369582 729 ntTSL 5 BASIC4.23□□□□□ -1.73
COL28A1Q2UY09 AC019155.1-201ENST00000382242 574 ntBASIC4.23□□□□□ -1.73
COL28A1Q2UY09 NDUFB4P4-201ENST00000404822 243 ntBASIC4.23□□□□□ -1.73
COL28A1Q2UY09 AL078581.1-201ENST00000419134 340 ntTSL 5 BASIC4.23□□□□□ -1.73
COL28A1Q2UY09 AC062016.2-201ENST00000420950 676 ntBASIC4.23□□□□□ -1.73
COL28A1Q2UY09 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC4.23□□□□□ -1.73
COL28A1Q2UY09 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
COL28A1Q2UY09 AC024619.1-202ENST00000426489 495 ntTSL 3 BASIC4.23□□□□□ -1.73
COL28A1Q2UY09 OR4F13P-201ENST00000428478 931 ntBASIC4.23□□□□□ -1.73
COL28A1Q2UY09 AC020594.1-201ENST00000437680 338 ntTSL 3 BASIC4.23□□□□□ -1.73
COL28A1Q2UY09 RPL23AP16-201ENST00000441715 421 ntBASIC4.23□□□□□ -1.73
COL28A1Q2UY09 MTCYBP11-201ENST00000447254 1109 ntBASIC4.23□□□□□ -1.73
COL28A1Q2UY09 SLC31A1P1-201ENST00000451221 567 ntBASIC4.23□□□□□ -1.73
COL28A1Q2UY09 AC010789.1-201ENST00000458489 291 ntTSL 5 BASIC4.23□□□□□ -1.73
COL28A1Q2UY09 AC034234.1-201ENST00000502993 465 ntTSL 3 BASIC4.23□□□□□ -1.73
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms