Protein–RNA interactions for Protein: Q08174

PCDH1, Protocadherin-1, humanhuman

Predictions only

Length 1,060 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1Q08174 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCDH1Q08174 CNGA1-202ENST00000402813 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDH1Q08174 ZNF559-ZNF177-201ENST00000434737 2340 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
PCDH1Q08174 CNTN1-208ENST00000551295 5557 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDH1Q08174 ZNF189-201ENST00000259395 3115 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
PCDH1Q08174 HSPE1P11-201ENST00000339579 310 ntBASIC5.63□□□□□ -1.51
PCDH1Q08174 Y_RNA.197-201ENST00000364004 102 ntBASIC5.63□□□□□ -1.51
PCDH1Q08174 SNORA62.1-201ENST00000364287 154 ntBASIC5.63□□□□□ -1.51
PCDH1Q08174 U3.11-201ENST00000364476 212 ntBASIC5.63□□□□□ -1.51
PCDH1Q08174 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
PCDH1Q08174 RNU6-1105P-201ENST00000384774 107 ntBASIC5.63□□□□□ -1.51
PCDH1Q08174 AL356057.3-201ENST00000402607 340 ntBASIC5.63□□□□□ -1.51
PCDH1Q08174 RNU2-39P-201ENST00000410604 198 ntBASIC5.63□□□□□ -1.51
PCDH1Q08174 AC069218.2-201ENST00000411665 344 ntBASIC5.63□□□□□ -1.51
PCDH1Q08174 AL031674.1-202ENST00000413070 465 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDH1Q08174 BX284656.2-201ENST00000414483 498 ntTSL 2 BASIC5.63□□□□□ -1.51
PCDH1Q08174 ARL5AP1-201ENST00000418991 388 ntBASIC5.63□□□□□ -1.51
PCDH1Q08174 MED13P1-201ENST00000428342 171 ntBASIC5.63□□□□□ -1.51
PCDH1Q08174 BX276092.6-201ENST00000430476 250 ntBASIC5.63□□□□□ -1.51
PCDH1Q08174 AC092168.2-201ENST00000430586 717 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDH1Q08174 AL353751.1-203ENST00000437032 603 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDH1Q08174 AC083899.1-201ENST00000454465 3819 ntBASIC5.63□□□□□ -1.51
PCDH1Q08174 AC104308.1-201ENST00000454621 333 ntBASIC5.63□□□□□ -1.51
PCDH1Q08174 BX276092.8-201ENST00000455722 250 ntBASIC5.63□□□□□ -1.51
PCDH1Q08174 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDH1Q08174 RNU1-88P-201ENST00000459274 128 ntBASIC5.63□□□□□ -1.51
PCDH1Q08174 AC098847.1-201ENST00000473094 348 ntBASIC5.63□□□□□ -1.51
PCDH1Q08174 AC126389.1-201ENST00000477436 290 ntBASIC5.63□□□□□ -1.51
PCDH1Q08174 TAF8-207ENST00000482432 556 ntTSL 2 BASIC5.63□□□□□ -1.51
PCDH1Q08174 RN7SL193P-201ENST00000491708 276 ntBASIC5.63□□□□□ -1.51
PCDH1Q08174 AC092436.1-201ENST00000506450 503 ntBASIC5.63□□□□□ -1.51
PCDH1Q08174 Y_RNA.682-201ENST00000516457 100 ntBASIC5.63□□□□□ -1.51
PCDH1Q08174 AC100784.1-201ENST00000522790 310 ntBASIC5.63□□□□□ -1.51
PCDH1Q08174 AC103726.2-201ENST00000523318 411 ntTSL 2 BASIC5.63□□□□□ -1.51
PCDH1Q08174 AP001804.3-201ENST00000525146 880 ntBASIC5.63□□□□□ -1.51
PCDH1Q08174 AC134511.1-201ENST00000535721 192 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDH1Q08174 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDH1Q08174 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDH1Q08174 TRPT1-216ENST00000546133 382 ntTSL 2 BASIC5.63□□□□□ -1.51
PCDH1Q08174 NOVA1-AS1-203ENST00000552101 468 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDH1Q08174 AC005670.2-201ENST00000571841 889 ntAPPRIS P1 TSL 5 BASIC5.63□□□□□ -1.51
PCDH1Q08174 AP005059.2-201ENST00000577527 578 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDH1Q08174 MIR4775-201ENST00000581168 75 ntBASIC5.63□□□□□ -1.51
PCDH1Q08174 AC005288.1-201ENST00000582842 860 ntTSL 2 BASIC5.63□□□□□ -1.51
PCDH1Q08174 MIR4424-201ENST00000585257 86 ntBASIC5.63□□□□□ -1.51
PCDH1Q08174 AL513327.3-201ENST00000602618 469 ntBASIC5.63□□□□□ -1.51
PCDH1Q08174 AC006006.1-201ENST00000603082 144 ntBASIC5.63□□□□□ -1.51
PCDH1Q08174 AC008782.1-201ENST00000603386 430 ntBASIC5.63□□□□□ -1.51
PCDH1Q08174 CYP2C61P-201ENST00000604072 290 ntBASIC5.63□□□□□ -1.51
PCDH1Q08174 AL356130.2-201ENST00000612554 404 ntTSL 3 BASIC5.63□□□□□ -1.51
PCDH1Q08174 AL021918.2-201ENST00000613415 194 ntBASIC5.63□□□□□ -1.51
PCDH1Q08174 AL049794.2-201ENST00000616301 365 ntBASIC5.63□□□□□ -1.51
PCDH1Q08174 AC024884.1-201ENST00000620583 399 ntBASIC5.63□□□□□ -1.51
PCDH1Q08174 MIR548A1HG-201ENST00000636739 558 ntTSL 4 BASIC5.63□□□□□ -1.51
PCDH1Q08174 ADAM21-201ENST00000603540 2658 ntAPPRIS P1 TSL 3 BASIC5.63□□□□□ -1.51
PCDH1Q08174 ZNF658-201ENST00000612867 4160 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
PCDH1Q08174 GPR89A-213ENST00000534502 1644 ntTSL 2 BASIC5.63□□□□□ -1.51
PCDH1Q08174 GPHN-204ENST00000543237 2459 ntTSL 2 BASIC5.63□□□□□ -1.51
PCDH1Q08174 IPCEF1-202ENST00000367220 1658 ntAPPRIS ALT2 TSL 2 BASIC5.63□□□□□ -1.51
PCDH1Q08174 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.62□□□□□ -1.51
PCDH1Q08174 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.62□□□□□ -1.51
PCDH1Q08174 ATXN7-208ENST00000484332 2741 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PCDH1Q08174 AC009313.2-201ENST00000417893 1941 ntBASIC5.62□□□□□ -1.51
PCDH1Q08174 PICALM-209ENST00000528398 2049 ntTSL 2 BASIC5.62□□□□□ -1.51
PCDH1Q08174 LINC00824-203ENST00000520206 2055 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PCDH1Q08174 BBIP1-207ENST00000448814 2119 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PCDH1Q08174 TDRD5-202ENST00000367614 3632 ntAPPRIS P3 TSL 2 BASIC5.62□□□□□ -1.51
PCDH1Q08174 OR56A4-204ENST00000641835 3613 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
PCDH1Q08174 AL139276.1-201ENST00000311910 1001 ntBASIC5.62□□□□□ -1.51
PCDH1Q08174 MIR133A2-201ENST00000347538 102 ntBASIC5.62□□□□□ -1.51
PCDH1Q08174 RGS10-201ENST00000369101 738 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
PCDH1Q08174 RNU2-29P-201ENST00000410423 189 ntBASIC5.62□□□□□ -1.51
PCDH1Q08174 OR6C66P-201ENST00000414917 930 ntBASIC5.62□□□□□ -1.51
PCDH1Q08174 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC5.62□□□□□ -1.51
PCDH1Q08174 AL354766.1-201ENST00000423396 542 ntBASIC5.62□□□□□ -1.51
PCDH1Q08174 AC005517.2-201ENST00000424673 553 ntBASIC5.62□□□□□ -1.51
PCDH1Q08174 AL358176.2-201ENST00000425769 204 ntBASIC5.62□□□□□ -1.51
PCDH1Q08174 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC5.62□□□□□ -1.51
PCDH1Q08174 AC012368.1-201ENST00000438115 552 ntTSL 3 BASIC5.62□□□□□ -1.51
PCDH1Q08174 SUMO2P3-201ENST00000438311 288 ntBASIC5.62□□□□□ -1.51
PCDH1Q08174 AC023141.8-201ENST00000442554 208 ntBASIC5.62□□□□□ -1.51
PCDH1Q08174 AL590652.1-201ENST00000453790 850 ntTSL 3 BASIC5.62□□□□□ -1.51
PCDH1Q08174 AC068228.1-201ENST00000461723 211 ntBASIC5.62□□□□□ -1.51
PCDH1Q08174 ST13P14-201ENST00000474095 734 ntBASIC5.62□□□□□ -1.51
PCDH1Q08174 AC083904.1-201ENST00000487828 231 ntBASIC5.62□□□□□ -1.51
PCDH1Q08174 AC020893.1-201ENST00000502452 580 ntBASIC5.62□□□□□ -1.51
PCDH1Q08174 AC105384.2-201ENST00000508433 640 ntBASIC5.62□□□□□ -1.51
PCDH1Q08174 AC074255.1-201ENST00000511259 501 ntBASIC5.62□□□□□ -1.51
PCDH1Q08174 MYL12AP1-201ENST00000518490 515 ntBASIC5.62□□□□□ -1.51
PCDH1Q08174 IGHVII-60-1-201ENST00000519079 256 ntBASIC5.62□□□□□ -1.51
PCDH1Q08174 AC132219.1-201ENST00000524337 478 ntTSL 5 BASIC5.62□□□□□ -1.51
PCDH1Q08174 AC018630.1-201ENST00000541376 925 ntBASIC5.62□□□□□ -1.51
PCDH1Q08174 CACNA1C-IT1-201ENST00000542984 687 ntTSL 3 BASIC5.62□□□□□ -1.51
PCDH1Q08174 LINC02400-201ENST00000548210 351 ntTSL 2 BASIC5.62□□□□□ -1.51
PCDH1Q08174 LSM3P2-201ENST00000551246 273 ntBASIC5.62□□□□□ -1.51
PCDH1Q08174 AL133371.1-201ENST00000555481 764 ntTSL 2 BASIC5.62□□□□□ -1.51
PCDH1Q08174 AC099518.4-202ENST00000576433 455 ntTSL 2 BASIC5.62□□□□□ -1.51
PCDH1Q08174 MIR4776-2-201ENST00000580204 80 ntBASIC5.62□□□□□ -1.51
PCDH1Q08174 AC011477.5-201ENST00000586571 259 ntBASIC5.62□□□□□ -1.51
PCDH1Q08174 ZNF528-211ENST00000598192 625 ntTSL 3 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 74.4 ms