Protein–RNA interactions for Protein: Q04837

SSBP1, Single-stranded DNA-binding protein, mitochondrial, humanhuman

Known RBP Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1Q04837 AC079228.1-201ENST00000624774 1049 ntBASIC2.39□□□□□ -2.03
SSBP1Q04837 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
SSBP1Q04837 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC2.39□□□□□ -2.03
SSBP1Q04837 ZBTB26-202ENST00000373656 4443 ntAPPRIS P1 TSL 1 (best) BASIC2.39□□□□□ -2.03
SSBP1Q04837 GCNT4-201ENST00000322348 5554 ntAPPRIS P1 BASIC2.39□□□□□ -2.03
SSBP1Q04837 ZNF680-202ENST00000447137 2159 ntTSL 2 BASIC2.39□□□□□ -2.03
SSBP1Q04837 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.39□□□□□ -2.03
SSBP1Q04837 C2orf73-202ENST00000398634 1921 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SSBP1Q04837 AL161431.1-201ENST00000618966 4205 ntBASIC2.38□□□□□ -2.03
SSBP1Q04837 RNU1-100P-201ENST00000365255 165 ntBASIC2.38□□□□□ -2.03
SSBP1Q04837 U3.15-201ENST00000365398 212 ntBASIC2.38□□□□□ -2.03
SSBP1Q04837 SNX10-203ENST00000409367 746 ntTSL 5 BASIC2.38□□□□□ -2.03
SSBP1Q04837 PPP1R1C-203ENST00000409702 1157 ntAPPRIS P1 TSL 1 (best) BASIC2.38□□□□□ -2.03
SSBP1Q04837 MTND4LP21-201ENST00000415303 295 ntBASIC2.38□□□□□ -2.03
SSBP1Q04837 VN1R31P-201ENST00000417498 730 ntBASIC2.38□□□□□ -2.03
SSBP1Q04837 AL034347.1-201ENST00000420766 835 ntTSL 3 BASIC2.38□□□□□ -2.03
SSBP1Q04837 LINC01884-201ENST00000433429 440 ntTSL 3 BASIC2.38□□□□□ -2.03
SSBP1Q04837 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC2.38□□□□□ -2.03
SSBP1Q04837 RPL23AP74-201ENST00000437246 471 ntBASIC2.38□□□□□ -2.03
SSBP1Q04837 LINC00484-204ENST00000439438 454 ntTSL 3 BASIC2.38□□□□□ -2.03
SSBP1Q04837 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC2.38□□□□□ -2.03
SSBP1Q04837 SLC16A12-AS1-202ENST00000454270 478 ntTSL 2 BASIC2.38□□□□□ -2.03
SSBP1Q04837 AC093157.1-204ENST00000454721 753 ntTSL 3 BASIC2.38□□□□□ -2.03
SSBP1Q04837 AP000873.1-201ENST00000463987 400 ntBASIC2.38□□□□□ -2.03
SSBP1Q04837 AC126182.1-201ENST00000478134 357 ntBASIC2.38□□□□□ -2.03
SSBP1Q04837 AC080162.1-201ENST00000480764 491 ntTSL 3 BASIC2.38□□□□□ -2.03
SSBP1Q04837 RN7SL293P-201ENST00000481765 281 ntBASIC2.38□□□□□ -2.03
SSBP1Q04837 AC006483.1-201ENST00000487308 313 ntBASIC2.38□□□□□ -2.03
SSBP1Q04837 AP001025.2-201ENST00000490908 477 ntBASIC2.38□□□□□ -2.03
SSBP1Q04837 OR2A20P-203ENST00000498397 1268 ntBASIC2.38□□□□□ -2.03
SSBP1Q04837 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC2.38□□□□□ -2.03
SSBP1Q04837 TMEM248P1-201ENST00000510579 951 ntBASIC2.38□□□□□ -2.03
SSBP1Q04837 LINC02475-202ENST00000512678 2622 ntTSL 1 (best) BASIC2.38□□□□□ -2.03
SSBP1Q04837 AC093689.1-201ENST00000514737 246 ntTSL 5 BASIC2.38□□□□□ -2.03
SSBP1Q04837 AC027419.2-201ENST00000518439 497 ntTSL 3 BASIC2.38□□□□□ -2.03
SSBP1Q04837 AP001458.1-201ENST00000532626 92 ntTSL 3 BASIC2.38□□□□□ -2.03
SSBP1Q04837 AC007458.1-201ENST00000542812 373 ntBASIC2.38□□□□□ -2.03
SSBP1Q04837 AC079362.1-201ENST00000546865 525 ntTSL 3 BASIC2.38□□□□□ -2.03
SSBP1Q04837 PPFIA2-AS1-210ENST00000553197 875 ntTSL 5 BASIC2.38□□□□□ -2.03
SSBP1Q04837 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC2.38□□□□□ -2.03
SSBP1Q04837 AC036103.1-201ENST00000563846 823 ntTSL 5 BASIC2.38□□□□□ -2.03
SSBP1Q04837 ZNF861P-201ENST00000588126 639 ntBASIC2.38□□□□□ -2.03
SSBP1Q04837 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC2.38□□□□□ -2.03
SSBP1Q04837 AC007687.1-201ENST00000602704 304 ntBASIC2.38□□□□□ -2.03
SSBP1Q04837 AC008277.2-201ENST00000605196 797 ntBASIC2.38□□□□□ -2.03
SSBP1Q04837 AF230666.1-202ENST00000608375 870 ntTSL 5 BASIC2.38□□□□□ -2.03
SSBP1Q04837 PLCE1P1-201ENST00000622094 305 ntBASIC2.38□□□□□ -2.03
SSBP1Q04837 AL355480.1-201ENST00000629041 99 ntBASIC2.38□□□□□ -2.03
SSBP1Q04837 MIR3651-201ENST00000630427 90 ntBASIC2.38□□□□□ -2.03
SSBP1Q04837 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC2.38□□□□□ -2.03
SSBP1Q04837 EYS-211ENST00000503581 10589 ntAPPRIS P3 TSL 5 BASIC2.38□□□□□ -2.03
SSBP1Q04837 GABPAP-201ENST00000419271 1356 ntBASIC2.37□□□□□ -2.03
SSBP1Q04837 SLC30A6-202ENST00000357055 4758 ntTSL 2 BASIC2.37□□□□□ -2.03
SSBP1Q04837 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.37□□□□□ -2.03
SSBP1Q04837 IL1R1-204ENST00000409929 1858 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SSBP1Q04837 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SSBP1Q04837 ADAM18-206ENST00000520772 1429 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SSBP1Q04837 CFHR4-201ENST00000251424 1292 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SSBP1Q04837 AL139095.1-201ENST00000404326 391 ntBASIC2.37□□□□□ -2.03
SSBP1Q04837 HMGB1P13-201ENST00000406019 642 ntBASIC2.37□□□□□ -2.03
SSBP1Q04837 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.37□□□□□ -2.03
SSBP1Q04837 AC073464.3-201ENST00000422564 712 ntBASIC2.37□□□□□ -2.03
SSBP1Q04837 AC092832.1-201ENST00000422934 400 ntBASIC2.37□□□□□ -2.03
SSBP1Q04837 AC073069.1-201ENST00000428657 441 ntBASIC2.37□□□□□ -2.03
SSBP1Q04837 AC007389.2-201ENST00000434630 306 ntBASIC2.37□□□□□ -2.03
SSBP1Q04837 AC006028.1-201ENST00000438379 402 ntBASIC2.37□□□□□ -2.03
SSBP1Q04837 RPL29P29-201ENST00000448725 423 ntBASIC2.37□□□□□ -2.03
SSBP1Q04837 AC027673.1-201ENST00000456245 405 ntBASIC2.37□□□□□ -2.03
SSBP1Q04837 AC092924.1-201ENST00000496084 487 ntTSL 4 BASIC2.37□□□□□ -2.03
SSBP1Q04837 PRELID3BP5-201ENST00000508612 460 ntBASIC2.37□□□□□ -2.03
SSBP1Q04837 HMGB1P41-201ENST00000520234 440 ntBASIC2.37□□□□□ -2.03
SSBP1Q04837 AC087362.1-201ENST00000527912 434 ntTSL 5 BASIC2.37□□□□□ -2.03
SSBP1Q04837 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC2.37□□□□□ -2.03
SSBP1Q04837 RGS4-209ENST00000531057 544 ntTSL 4 BASIC2.37□□□□□ -2.03
SSBP1Q04837 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC2.37□□□□□ -2.03
SSBP1Q04837 OR7K1P-201ENST00000546439 926 ntBASIC2.37□□□□□ -2.03
SSBP1Q04837 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC2.37□□□□□ -2.03
SSBP1Q04837 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC2.37□□□□□ -2.03
SSBP1Q04837 AC024270.4-201ENST00000570202 421 ntTSL 3 BASIC2.37□□□□□ -2.03
SSBP1Q04837 AC007014.1-201ENST00000572828 610 ntTSL 3 BASIC2.37□□□□□ -2.03
SSBP1Q04837 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC2.37□□□□□ -2.03
SSBP1Q04837 MTND2P13-201ENST00000577438 1039 ntBASIC2.37□□□□□ -2.03
SSBP1Q04837 LINC01539-206ENST00000593282 678 ntTSL 4 BASIC2.37□□□□□ -2.03
SSBP1Q04837 AF230666.2-201ENST00000602328 725 ntBASIC2.37□□□□□ -2.03
SSBP1Q04837 AP000787.2-201ENST00000604432 568 ntBASIC2.37□□□□□ -2.03
SSBP1Q04837 IGHV3-29-201ENST00000604817 344 ntBASIC2.37□□□□□ -2.03
SSBP1Q04837 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC2.37□□□□□ -2.03
SSBP1Q04837 AC022509.4-201ENST00000621404 572 ntBASIC2.37□□□□□ -2.03
SSBP1Q04837 AC006378.2-201ENST00000623178 2476 ntBASIC2.37□□□□□ -2.03
SSBP1Q04837 CDY3P-201ENST00000454543 1618 ntBASIC2.37□□□□□ -2.03
SSBP1Q04837 AL133383.2-201ENST00000622958 2336 ntBASIC2.37□□□□□ -2.03
SSBP1Q04837 PCDH11Y-201ENST00000215473 4595 ntAPPRIS ALT2 TSL 1 (best) BASIC2.37□□□□□ -2.03
SSBP1Q04837 ZNF117-203ENST00000610793 1374 ntTSL 2 BASIC2.36□□□□□ -2.03
SSBP1Q04837 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC2.36□□□□□ -2.03
SSBP1Q04837 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC2.36□□□□□ -2.03
SSBP1Q04837 LINC02030-201ENST00000492683 1602 ntTSL 5 BASIC2.36□□□□□ -2.03
SSBP1Q04837 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.36□□□□□ -2.03
SSBP1Q04837 IL1RAPL2-201ENST00000344799 1290 ntTSL 5 BASIC2.36□□□□□ -2.03
SSBP1Q04837 RNA5SP124-201ENST00000362739 110 ntBASIC2.36□□□□□ -2.03
SSBP1Q04837 MIR142-201ENST00000384835 87 ntBASIC2.36□□□□□ -2.03
Retrieved 100 of 98,524 protein–RNA pairs in 70.2 ms