Protein–RNA interactions for Protein: P83916

CBX1, Chromobox protein homolog 1, humanhuman

Predictions only

Length 185 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1P83916 CYB5AP4-201ENST00000396692 399 ntBASIC3.63□□□□□ -1.83
CBX1P83916 EIF5P1-201ENST00000400019 1231 ntBASIC3.63□□□□□ -1.83
CBX1P83916 U3.39-201ENST00000408569 239 ntBASIC3.63□□□□□ -1.83
CBX1P83916 RNA5SP344-201ENST00000411081 104 ntBASIC3.63□□□□□ -1.83
CBX1P83916 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC3.63□□□□□ -1.83
CBX1P83916 AC008280.1-201ENST00000418851 412 ntBASIC3.63□□□□□ -1.83
CBX1P83916 TCEAL3-AS1-201ENST00000424887 361 ntTSL 5 BASIC3.63□□□□□ -1.83
CBX1P83916 RPS29P17-201ENST00000430795 166 ntBASIC3.63□□□□□ -1.83
CBX1P83916 AL590762.3-201ENST00000436372 640 ntBASIC3.63□□□□□ -1.83
CBX1P83916 AL590867.3-201ENST00000436953 438 ntTSL 3 BASIC3.63□□□□□ -1.83
CBX1P83916 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC3.63□□□□□ -1.83
CBX1P83916 AC005002.1-201ENST00000447458 540 ntBASIC3.63□□□□□ -1.83
CBX1P83916 ETV5-AS1-201ENST00000453370 560 ntTSL 4 BASIC3.63□□□□□ -1.83
CBX1P83916 AC007688.1-201ENST00000475592 759 ntBASIC3.63□□□□□ -1.83
CBX1P83916 SETP6-201ENST00000479329 568 ntBASIC3.63□□□□□ -1.83
CBX1P83916 RN7SL604P-201ENST00000492589 296 ntBASIC3.63□□□□□ -1.83
CBX1P83916 RNF138P1-201ENST00000502765 546 ntBASIC3.63□□□□□ -1.83
CBX1P83916 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC3.63□□□□□ -1.83
CBX1P83916 AC112518.2-201ENST00000508565 425 ntBASIC3.63□□□□□ -1.83
CBX1P83916 AC107463.1-202ENST00000514526 689 ntTSL 2 BASIC3.63□□□□□ -1.83
CBX1P83916 AC107934.2-201ENST00000518653 310 ntBASIC3.63□□□□□ -1.83
CBX1P83916 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC3.63□□□□□ -1.83
CBX1P83916 AC073487.1-201ENST00000547009 529 ntTSL 4 BASIC3.63□□□□□ -1.83
CBX1P83916 AC004217.3-201ENST00000551552 878 ntBASIC3.63□□□□□ -1.83
CBX1P83916 AC068397.1-201ENST00000560337 531 ntTSL 2 BASIC3.63□□□□□ -1.83
CBX1P83916 OR4G1P-201ENST00000588632 938 ntBASIC3.63□□□□□ -1.83
CBX1P83916 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.63□□□□□ -1.83
CBX1P83916 AC006077.1-201ENST00000604746 343 ntBASIC3.63□□□□□ -1.83
CBX1P83916 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.63□□□□□ -1.83
CBX1P83916 MIR6780A-201ENST00000615089 68 ntBASIC3.63□□□□□ -1.83
CBX1P83916 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC3.63□□□□□ -1.83
CBX1P83916 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
CBX1P83916 CD36-221ENST00000534394 1741 ntTSL 2 BASIC3.63□□□□□ -1.83
CBX1P83916 TANK-205ENST00000405852 2155 ntTSL 5 BASIC3.63□□□□□ -1.83
CBX1P83916 SLC38A9-203ENST00000416547 2236 ntTSL 5 BASIC3.62□□□□□ -1.83
CBX1P83916 MUM1L1-203ENST00000372552 3957 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
CBX1P83916 IQCH-201ENST00000335894 4208 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
CBX1P83916 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.62□□□□□ -1.83
CBX1P83916 RNU6-444P-201ENST00000383988 108 ntBASIC3.62□□□□□ -1.83
CBX1P83916 SOD2P1-201ENST00000396543 562 ntBASIC3.62□□□□□ -1.83
CBX1P83916 FABP12P1-201ENST00000401911 322 ntBASIC3.62□□□□□ -1.83
CBX1P83916 AC011933.1-201ENST00000413334 321 ntBASIC3.62□□□□□ -1.83
CBX1P83916 BMS1P22-201ENST00000414726 313 ntBASIC3.62□□□□□ -1.83
CBX1P83916 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.62□□□□□ -1.83
CBX1P83916 AC244098.2-201ENST00000422068 99 ntBASIC3.62□□□□□ -1.83
CBX1P83916 AL139281.1-201ENST00000422120 335 ntBASIC3.62□□□□□ -1.83
CBX1P83916 RPS27AP12-201ENST00000429552 465 ntBASIC3.62□□□□□ -1.83
CBX1P83916 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CBX1P83916 AL354794.1-201ENST00000442103 516 ntTSL 3 BASIC3.62□□□□□ -1.83
CBX1P83916 AC116533.1-201ENST00000459748 321 ntBASIC3.62□□□□□ -1.83
CBX1P83916 AC026347.1-201ENST00000463255 474 ntTSL 3 BASIC3.62□□□□□ -1.83
CBX1P83916 AC078857.1-201ENST00000469870 667 ntBASIC3.62□□□□□ -1.83
CBX1P83916 AL162742.2-201ENST00000472915 244 ntTSL 5 BASIC3.62□□□□□ -1.83
CBX1P83916 AC013356.1-201ENST00000489027 564 ntBASIC3.62□□□□□ -1.83
CBX1P83916 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.62□□□□□ -1.83
CBX1P83916 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.62□□□□□ -1.83
CBX1P83916 AC010245.1-201ENST00000511329 754 ntTSL 3 BASIC3.62□□□□□ -1.83
CBX1P83916 AC008574.1-201ENST00000514240 433 ntTSL 3 BASIC3.62□□□□□ -1.83
CBX1P83916 HMGB1P1-201ENST00000522557 636 ntBASIC3.62□□□□□ -1.83
CBX1P83916 AC124293.1-201ENST00000530034 493 ntBASIC3.62□□□□□ -1.83
CBX1P83916 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.62□□□□□ -1.83
CBX1P83916 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC3.62□□□□□ -1.83
CBX1P83916 MIR8084-201ENST00000614105 89 ntBASIC3.62□□□□□ -1.83
CBX1P83916 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
CBX1P83916 CDKN2B-AS.1-201ENST00000617921 150 ntBASIC3.62□□□□□ -1.83
CBX1P83916 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC3.62□□□□□ -1.83
CBX1P83916 MIR4278-201ENST00000636094 69 ntBASIC3.62□□□□□ -1.83
CBX1P83916 AC024341.1-201ENST00000526444 1552 ntBASIC3.62□□□□□ -1.83
CBX1P83916 AL355578.1-201ENST00000607405 1328 ntBASIC3.62□□□□□ -1.83
CBX1P83916 GABPAP-201ENST00000419271 1356 ntBASIC3.62□□□□□ -1.83
CBX1P83916 PRKACB-208ENST00000394839 4200 ntTSL 2 BASIC3.62□□□□□ -1.83
CBX1P83916 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
CBX1P83916 AL499616.1-201ENST00000415437 2633 ntTSL 2 BASIC3.61□□□□□ -1.83
CBX1P83916 NBPF20-202ENST00000392971 18450 ntAPPRIS P2 TSL 5 BASIC3.61□□□□□ -1.83
CBX1P83916 RNA5SP447-201ENST00000363749 119 ntBASIC3.61□□□□□ -1.83
CBX1P83916 SSXP10-201ENST00000402595 565 ntBASIC3.61□□□□□ -1.83
CBX1P83916 RNU2-37P-201ENST00000410695 177 ntBASIC3.61□□□□□ -1.83
CBX1P83916 TRIM60P5Y-201ENST00000413946 574 ntBASIC3.61□□□□□ -1.83
CBX1P83916 EI24P1-201ENST00000416584 867 ntBASIC3.61□□□□□ -1.83
CBX1P83916 RPS3AP9-201ENST00000417027 792 ntBASIC3.61□□□□□ -1.83
CBX1P83916 COX6CP17-201ENST00000421389 185 ntBASIC3.61□□□□□ -1.83
CBX1P83916 SDCBPP2-201ENST00000424643 885 ntBASIC3.61□□□□□ -1.83
CBX1P83916 AL009174.1-201ENST00000426577 416 ntBASIC3.61□□□□□ -1.83
CBX1P83916 LINC02529-201ENST00000429657 772 ntTSL 3 BASIC3.61□□□□□ -1.83
CBX1P83916 RPL17P35-201ENST00000432217 549 ntBASIC3.61□□□□□ -1.83
CBX1P83916 BTF3P10-201ENST00000433415 495 ntBASIC3.61□□□□□ -1.83
CBX1P83916 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC3.61□□□□□ -1.83
CBX1P83916 AC006994.1-201ENST00000438212 839 ntBASIC3.61□□□□□ -1.83
CBX1P83916 AL033380.1-201ENST00000442781 421 ntTSL 2 BASIC3.61□□□□□ -1.83
CBX1P83916 HSFY3P-201ENST00000444242 1191 ntBASIC3.61□□□□□ -1.83
CBX1P83916 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.61□□□□□ -1.83
CBX1P83916 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.61□□□□□ -1.83
CBX1P83916 AL096803.2-201ENST00000450032 677 ntBASIC3.61□□□□□ -1.83
CBX1P83916 GTF2IP12-201ENST00000456547 356 ntBASIC3.61□□□□□ -1.83
CBX1P83916 RPL23AP24-201ENST00000458203 385 ntBASIC3.61□□□□□ -1.83
CBX1P83916 AC091564.1-201ENST00000464563 479 ntBASIC3.61□□□□□ -1.83
CBX1P83916 RPS4XP6-201ENST00000477670 797 ntBASIC3.61□□□□□ -1.83
CBX1P83916 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC3.61□□□□□ -1.83
CBX1P83916 AC005726.1-201ENST00000494679 427 ntBASIC3.61□□□□□ -1.83
CBX1P83916 HOMER1-204ENST00000508576 815 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 100.9 ms