Protein–RNA interactions for Protein: P61619

SEC61A1, Protein transport protein Sec61 subunit alpha isoform 1, humanhuman

Known RBP Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A1P61619 AC068112.1-201ENST00000580057 346 ntTSL 3 BASIC3.99□□□□□ -1.77
SEC61A1P61619 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC3.99□□□□□ -1.77
SEC61A1P61619 AC017100.2-201ENST00000584628 355 ntBASIC3.99□□□□□ -1.77
SEC61A1P61619 AC087683.1-201ENST00000591187 441 ntBASIC3.99□□□□□ -1.77
SEC61A1P61619 AC090181.2-201ENST00000602975 672 ntBASIC3.99□□□□□ -1.77
SEC61A1P61619 AC079089.3-201ENST00000603094 673 ntBASIC3.99□□□□□ -1.77
SEC61A1P61619 FBXW7-AS1-201ENST00000605147 372 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SEC61A1P61619 AC087752.4-201ENST00000605911 462 ntBASIC3.99□□□□□ -1.77
SEC61A1P61619 AC108747.1-201ENST00000609508 535 ntBASIC3.99□□□□□ -1.77
SEC61A1P61619 DLEU2_1.1-201ENST00000612089 120 ntBASIC3.99□□□□□ -1.77
SEC61A1P61619 AC100793.4-201ENST00000613683 429 ntBASIC3.99□□□□□ -1.77
SEC61A1P61619 DLEU2_1.2-201ENST00000614667 120 ntBASIC3.99□□□□□ -1.77
SEC61A1P61619 CT45A10-202ENST00000617981 578 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SEC61A1P61619 AC015908.5-201ENST00000623289 343 ntBASIC3.99□□□□□ -1.77
SEC61A1P61619 R3HCC1L-201ENST00000298999 3379 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
SEC61A1P61619 C9orf72-203ENST00000380003 3200 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SEC61A1P61619 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SEC61A1P61619 MFSD8-216ENST00000641147 4009 ntBASIC3.99□□□□□ -1.77
SEC61A1P61619 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC3.99□□□□□ -1.77
SEC61A1P61619 MYCT1-201ENST00000367245 3030 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SEC61A1P61619 AC107029.2-201ENST00000462011 2305 ntTSL 2 BASIC3.99□□□□□ -1.77
SEC61A1P61619 NT5C3A-203ENST00000396152 1788 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
SEC61A1P61619 TIPARP-205ENST00000486483 2150 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
SEC61A1P61619 ZNF660-201ENST00000322734 5834 ntAPPRIS P1 TSL 2 BASIC3.99□□□□□ -1.77
SEC61A1P61619 GABRB2-203ENST00000393959 7191 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
SEC61A1P61619 AC018529.3-201ENST00000624212 2254 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SEC61A1P61619 SLC30A6-205ENST00000435660 4776 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SEC61A1P61619 AL360270.1-201ENST00000440689 2359 ntTSL 2 BASIC3.98□□□□□ -1.77
SEC61A1P61619 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SEC61A1P61619 ZNF345-213ENST00000589046 3120 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SEC61A1P61619 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SEC61A1P61619 POSTN-201ENST00000379742 3071 ntAPPRIS ALT2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SEC61A1P61619 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC3.98□□□□□ -1.77
SEC61A1P61619 OR13C4-201ENST00000277216 957 ntAPPRIS P1 BASIC3.98□□□□□ -1.77
SEC61A1P61619 STARD6-201ENST00000307844 663 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SEC61A1P61619 RPL21P132-201ENST00000331267 462 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 XAGE1A-202ENST00000375600 474 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SEC61A1P61619 XAGE1B-202ENST00000375613 474 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SEC61A1P61619 ESD-201ENST00000378697 1079 ntTSL 5 BASIC3.98□□□□□ -1.77
SEC61A1P61619 RNY3P10-201ENST00000384764 102 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 MIR513A2-201ENST00000385249 127 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 BPIFC-202ENST00000397450 458 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SEC61A1P61619 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
SEC61A1P61619 RN7SKP106-201ENST00000410832 272 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 ELOCP17-201ENST00000414751 326 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 CDK8P2-201ENST00000415020 547 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 AL807761.1-201ENST00000417622 171 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 BX510359.2-201ENST00000417920 305 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 OFD1P11Y-201ENST00000418213 1177 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 LINC01362-201ENST00000419658 338 ntTSL 5 BASIC3.98□□□□□ -1.77
SEC61A1P61619 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC3.98□□□□□ -1.77
SEC61A1P61619 AC092647.1-201ENST00000420654 287 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 MTCO3P1-205ENST00000422088 832 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 AL645608.4-201ENST00000423619 154 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 MTND1P4-201ENST00000435196 415 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 UBE2V1P3-201ENST00000439651 417 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 AL731568.1-201ENST00000445111 434 ntTSL 2 BASIC3.98□□□□□ -1.77
SEC61A1P61619 COX6CP12-201ENST00000446748 202 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 ST13P20-201ENST00000447996 1065 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 AL451050.1-201ENST00000450126 415 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 RPS5P7-201ENST00000456664 608 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 TPT1P7-201ENST00000458300 517 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 ARHGEF3-AS1-201ENST00000477246 489 ntTSL 2 BASIC3.98□□□□□ -1.77
SEC61A1P61619 ALDH7A1P3-201ENST00000492517 345 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 MTCYBP17-201ENST00000503579 789 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 SCARNA22-201ENST00000503991 125 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 SCOC-206ENST00000506322 687 ntAPPRIS ALT1 TSL 5 BASIC3.98□□□□□ -1.77
SEC61A1P61619 AC099520.1-203ENST00000506976 464 ntTSL 3 BASIC3.98□□□□□ -1.77
SEC61A1P61619 NREP-AS1-202ENST00000507222 610 ntTSL 3 BASIC3.98□□□□□ -1.77
SEC61A1P61619 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC3.98□□□□□ -1.77
SEC61A1P61619 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SEC61A1P61619 VWA8P1-201ENST00000510889 176 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC3.98□□□□□ -1.77
SEC61A1P61619 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC3.98□□□□□ -1.77
SEC61A1P61619 MAL2-201ENST00000522112 573 ntTSL 4 BASIC3.98□□□□□ -1.77
SEC61A1P61619 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.98□□□□□ -1.77
SEC61A1P61619 AC044810.3-201ENST00000527565 589 ntTSL 3 BASIC3.98□□□□□ -1.77
SEC61A1P61619 A2ML1-AS1-201ENST00000537288 452 ntTSL 3 BASIC3.98□□□□□ -1.77
SEC61A1P61619 SNHG1-217ENST00000541578 588 ntTSL 3 BASIC3.98□□□□□ -1.77
SEC61A1P61619 AL450442.1-201ENST00000554042 854 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SEC61A1P61619 AL035425.2-201ENST00000563887 563 ntAPPRIS P1 TSL 4 BASIC3.98□□□□□ -1.77
SEC61A1P61619 AC015912.2-201ENST00000571053 181 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 ANKRD36BP2-206ENST00000575193 1245 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 MIR5699-201ENST00000578903 90 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 MTATP6P3-201ENST00000581686 676 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 MIR548AB-201ENST00000584917 84 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 AC107982.3-201ENST00000584957 985 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 MIR7515HG-239ENST00000591053 1113 ntTSL 5 BASIC3.98□□□□□ -1.77
SEC61A1P61619 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC3.98□□□□□ -1.77
SEC61A1P61619 HSPE1P14-201ENST00000605812 302 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 AC090186.1-201ENST00000605991 572 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 AC005392.3-201ENST00000607109 459 ntTSL 2 BASIC3.98□□□□□ -1.77
SEC61A1P61619 AC008498.1-201ENST00000613012 531 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 AC025594.3-201ENST00000613068 790 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 MIR6780A-201ENST00000615089 68 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 AL121873.1-201ENST00000616013 524 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 MIR7844-201ENST00000616161 122 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 AC123768.4-201ENST00000616244 701 ntBASIC3.98□□□□□ -1.77
SEC61A1P61619 RMST_9.1-201ENST00000619945 193 ntBASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 79.2 ms