Protein–RNA interactions for Protein: P58872

RHBDL3, Rhomboid-related protein 3, humanhuman

Predictions only

Length 404 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDL3P58872 RNU1-64P-201ENST00000365443 163 ntBASIC5.04□□□□□ -1.6
RHBDL3P58872 RNU6-1242P-201ENST00000391052 103 ntBASIC5.04□□□□□ -1.6
RHBDL3P58872 STON1-GTF2A1L-204ENST00000405008 3821 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
RHBDL3P58872 AC068533.2-201ENST00000411872 306 ntBASIC5.04□□□□□ -1.6
RHBDL3P58872 RPL36AP36-201ENST00000418616 301 ntBASIC5.04□□□□□ -1.6
RHBDL3P58872 AC008154.2-201ENST00000420268 414 ntTSL 3 BASIC5.04□□□□□ -1.6
RHBDL3P58872 AC009313.1-201ENST00000425470 503 ntTSL 3 BASIC5.04□□□□□ -1.6
RHBDL3P58872 COX7BP2-201ENST00000437976 242 ntBASIC5.04□□□□□ -1.6
RHBDL3P58872 AL691497.1-201ENST00000443270 449 ntTSL 2 BASIC5.04□□□□□ -1.6
RHBDL3P58872 AC105398.1-201ENST00000446073 402 ntTSL 5 BASIC5.04□□□□□ -1.6
RHBDL3P58872 AL359073.1-201ENST00000448036 403 ntBASIC5.04□□□□□ -1.6
RHBDL3P58872 USP9YP34-201ENST00000453983 808 ntBASIC5.04□□□□□ -1.6
RHBDL3P58872 RPS20P32-201ENST00000456044 356 ntBASIC5.04□□□□□ -1.6
RHBDL3P58872 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC5.04□□□□□ -1.6
RHBDL3P58872 RPL7P38-201ENST00000488396 739 ntBASIC5.04□□□□□ -1.6
RHBDL3P58872 AC078918.1-201ENST00000498515 228 ntBASIC5.04□□□□□ -1.6
RHBDL3P58872 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC5.04□□□□□ -1.6
RHBDL3P58872 FABP5P12-201ENST00000515543 389 ntBASIC5.04□□□□□ -1.6
RHBDL3P58872 RN7SKP265-201ENST00000516448 223 ntBASIC5.04□□□□□ -1.6
RHBDL3P58872 AC011008.1-201ENST00000522026 439 ntTSL 3 BASIC5.04□□□□□ -1.6
RHBDL3P58872 HSPA8P13-201ENST00000523715 472 ntBASIC5.04□□□□□ -1.6
RHBDL3P58872 MTCO2P15-201ENST00000532655 656 ntBASIC5.04□□□□□ -1.6
RHBDL3P58872 IFNG-AS1-201ENST00000536914 494 ntTSL 5 BASIC5.04□□□□□ -1.6
RHBDL3P58872 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC5.04□□□□□ -1.6
RHBDL3P58872 AC074050.1-201ENST00000563247 211 ntBASIC5.04□□□□□ -1.6
RHBDL3P58872 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC5.04□□□□□ -1.6
RHBDL3P58872 LINC00347-205ENST00000597518 868 ntTSL 5 BASIC5.04□□□□□ -1.6
RHBDL3P58872 AC091057.2-201ENST00000602594 792 ntBASIC5.04□□□□□ -1.6
RHBDL3P58872 AC124312.4-201ENST00000605533 310 ntBASIC5.04□□□□□ -1.6
RHBDL3P58872 AC013244.3-201ENST00000605614 388 ntBASIC5.04□□□□□ -1.6
RHBDL3P58872 AL713922.2-201ENST00000619384 716 ntBASIC5.04□□□□□ -1.6
RHBDL3P58872 AC006963.1-201ENST00000624003 1052 ntBASIC5.04□□□□□ -1.6
RHBDL3P58872 AC009951.2-201ENST00000634873 644 ntTSL 5 BASIC5.04□□□□□ -1.6
RHBDL3P58872 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.04□□□□□ -1.6
RHBDL3P58872 R3HCC1L-205ENST00000612478 3337 ntTSL 5 BASIC5.04□□□□□ -1.6
RHBDL3P58872 SCN1A-210ENST00000635776 10107 ntTSL 5 BASIC5.04□□□□□ -1.6
RHBDL3P58872 ADGRL2-204ENST00000370715 5585 ntTSL 1 (best) BASIC5.04□□□□□ -1.6
RHBDL3P58872 GHR-213ENST00000622294 4312 ntTSL 5 BASIC5.04□□□□□ -1.6
RHBDL3P58872 PTPN13-201ENST00000316707 7546 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
RHBDL3P58872 CYP3A7-CYP3A51P-201ENST00000611620 1608 ntTSL 5 BASIC5.04□□□□□ -1.6
RHBDL3P58872 LUM-201ENST00000266718 3008 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
RHBDL3P58872 EOGT-210ENST00000615922 1931 ntBASIC5.03□□□□□ -1.6
RHBDL3P58872 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
RHBDL3P58872 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.03□□□□□ -1.6
RHBDL3P58872 ZNF43-207ENST00000595461 3399 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
RHBDL3P58872 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RHBDL3P58872 AC007685.1-201ENST00000329806 452 ntBASIC5.03□□□□□ -1.6
RHBDL3P58872 RNU6-335P-201ENST00000364563 113 ntBASIC5.03□□□□□ -1.6
RHBDL3P58872 S100A10-201ENST00000368809 616 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
RHBDL3P58872 GTSF1L-202ENST00000373005 459 ntAPPRIS ALT2 TSL 3 BASIC5.03□□□□□ -1.6
RHBDL3P58872 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC5.03□□□□□ -1.6
RHBDL3P58872 RNU11-4P-201ENST00000391149 133 ntBASIC5.03□□□□□ -1.6
RHBDL3P58872 MTCO2P17-201ENST00000424336 677 ntBASIC5.03□□□□□ -1.6
RHBDL3P58872 MRPS18BP2-201ENST00000434310 759 ntBASIC5.03□□□□□ -1.6
RHBDL3P58872 RPL26P28-201ENST00000451325 435 ntBASIC5.03□□□□□ -1.6
RHBDL3P58872 FGF7P3-201ENST00000454645 303 ntBASIC5.03□□□□□ -1.6
RHBDL3P58872 RPL18AP17-201ENST00000455326 198 ntBASIC5.03□□□□□ -1.6
RHBDL3P58872 AC078883.3-201ENST00000458314 512 ntTSL 2 BASIC5.03□□□□□ -1.6
RHBDL3P58872 AC005921.1-201ENST00000510589 286 ntBASIC5.03□□□□□ -1.6
RHBDL3P58872 FTH1P9-201ENST00000513251 355 ntBASIC5.03□□□□□ -1.6
RHBDL3P58872 AC010255.3-204ENST00000514637 454 ntTSL 2 BASIC5.03□□□□□ -1.6
RHBDL3P58872 AC090193.1-201ENST00000518633 543 ntTSL 4 BASIC5.03□□□□□ -1.6
RHBDL3P58872 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC5.03□□□□□ -1.6
RHBDL3P58872 AC006065.3-201ENST00000541769 419 ntTSL 5 BASIC5.03□□□□□ -1.6
RHBDL3P58872 AL133279.1-201ENST00000553487 473 ntTSL 3 BASIC5.03□□□□□ -1.6
RHBDL3P58872 LINC02329-201ENST00000554753 511 ntTSL 5 BASIC5.03□□□□□ -1.6
RHBDL3P58872 AC012182.1-201ENST00000570133 895 ntBASIC5.03□□□□□ -1.6
RHBDL3P58872 AC116003.1-202ENST00000579386 501 ntTSL 3 BASIC5.03□□□□□ -1.6
RHBDL3P58872 AC015908.2-202ENST00000585243 756 ntTSL 3 BASIC5.03□□□□□ -1.6
RHBDL3P58872 AC092296.3-201ENST00000589968 249 ntTSL 3 BASIC5.03□□□□□ -1.6
RHBDL3P58872 AC022022.2-201ENST00000602989 360 ntBASIC5.03□□□□□ -1.6
RHBDL3P58872 IGKV1OR2-118-201ENST00000603238 347 ntBASIC5.03□□□□□ -1.6
RHBDL3P58872 BNIP3P11-201ENST00000603878 563 ntBASIC5.03□□□□□ -1.6
RHBDL3P58872 AC131235.4-201ENST00000609288 620 ntBASIC5.03□□□□□ -1.6
RHBDL3P58872 ATXN3L-202ENST00000622204 837 ntTSL 5 BASIC5.03□□□□□ -1.6
RHBDL3P58872 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC5.03□□□□□ -1.6
RHBDL3P58872 SKIL-201ENST00000259119 3057 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RHBDL3P58872 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RHBDL3P58872 LINC02393-202ENST00000614177 1993 ntTSL 2 BASIC5.03□□□□□ -1.6
RHBDL3P58872 CEP152-203ENST00000399334 5097 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
RHBDL3P58872 AC008079.2-201ENST00000623543 20396 ntBASIC5.03□□□□□ -1.6
RHBDL3P58872 MTND4P26-201ENST00000415971 1359 ntBASIC5.03□□□□□ -1.6
RHBDL3P58872 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
RHBDL3P58872 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
RHBDL3P58872 CNTN5-209ENST00000528682 3800 ntAPPRIS P4 TSL 5 BASIC5.02□□□□□ -1.61
RHBDL3P58872 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC5.02□□□□□ -1.61
RHBDL3P58872 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RHBDL3P58872 TAF7L-201ENST00000324762 2107 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
RHBDL3P58872 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RHBDL3P58872 FAN1-202ENST00000561594 2738 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
RHBDL3P58872 RNA5SP189-201ENST00000364920 115 ntBASIC5.02□□□□□ -1.61
RHBDL3P58872 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC5.02□□□□□ -1.61
RHBDL3P58872 RPL21P65-201ENST00000406094 466 ntBASIC5.02□□□□□ -1.61
RHBDL3P58872 VDAC1P9-201ENST00000412766 841 ntBASIC5.02□□□□□ -1.61
RHBDL3P58872 AC069280.1-201ENST00000413094 439 ntTSL 3 BASIC5.02□□□□□ -1.61
RHBDL3P58872 AC009237.10-201ENST00000414112 510 ntBASIC5.02□□□□□ -1.61
RHBDL3P58872 HIGD1AP15-201ENST00000416198 280 ntBASIC5.02□□□□□ -1.61
RHBDL3P58872 RPL22P18-201ENST00000417197 377 ntBASIC5.02□□□□□ -1.61
RHBDL3P58872 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC5.02□□□□□ -1.61
RHBDL3P58872 AC012506.4-201ENST00000421563 541 ntTSL 4 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 121.8 ms