Protein–RNA interactions for Protein: P56524

HDAC4, Histone deacetylase 4, humanhuman

Predictions only

Length 1,084 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4P56524 TSHB-201ENST00000256592 537 ntAPPRIS P1 TSL 5 BASIC4.42□□□□□ -1.7
HDAC4P56524 RNU6-115P-201ENST00000364310 107 ntBASIC4.42□□□□□ -1.7
HDAC4P56524 MIR513A2-201ENST00000385249 127 ntBASIC4.42□□□□□ -1.7
HDAC4P56524 RNU6-1300P-201ENST00000391046 108 ntBASIC4.42□□□□□ -1.7
HDAC4P56524 SNORA57.1-201ENST00000391227 145 ntBASIC4.42□□□□□ -1.7
HDAC4P56524 FAM26D-203ENST00000405399 1165 ntTSL 1 (best) BASIC4.42□□□□□ -1.7
HDAC4P56524 AMD1P2-201ENST00000412936 992 ntBASIC4.42□□□□□ -1.7
HDAC4P56524 AC011933.1-201ENST00000413334 321 ntBASIC4.42□□□□□ -1.7
HDAC4P56524 UBE2Q2P5Y-201ENST00000413867 207 ntBASIC4.42□□□□□ -1.7
HDAC4P56524 AL161449.1-201ENST00000414531 1199 ntBASIC4.42□□□□□ -1.7
HDAC4P56524 AC008280.1-201ENST00000418851 412 ntBASIC4.42□□□□□ -1.7
HDAC4P56524 RPS12P23-201ENST00000419579 400 ntBASIC4.42□□□□□ -1.7
HDAC4P56524 AC104777.1-203ENST00000423428 554 ntTSL 3 BASIC4.42□□□□□ -1.7
HDAC4P56524 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC4.42□□□□□ -1.7
HDAC4P56524 AC004975.1-201ENST00000428733 208 ntBASIC4.42□□□□□ -1.7
HDAC4P56524 AL139824.1-201ENST00000431983 453 ntTSL 3 BASIC4.42□□□□□ -1.7
HDAC4P56524 UBE2Q2P4Y-201ENST00000433767 207 ntBASIC4.42□□□□□ -1.7
HDAC4P56524 AC010881.1-201ENST00000433830 235 ntBASIC4.42□□□□□ -1.7
HDAC4P56524 KCTD10P1-201ENST00000434203 625 ntBASIC4.42□□□□□ -1.7
HDAC4P56524 YWHAZP8-201ENST00000436935 731 ntBASIC4.42□□□□□ -1.7
HDAC4P56524 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.42□□□□□ -1.7
HDAC4P56524 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC4.42□□□□□ -1.7
HDAC4P56524 LINC00393-202ENST00000452852 485 ntTSL 3 BASIC4.42□□□□□ -1.7
HDAC4P56524 FABP3P2-201ENST00000453169 399 ntBASIC4.42□□□□□ -1.7
HDAC4P56524 ART2BP-201ENST00000453501 499 ntBASIC4.42□□□□□ -1.7
HDAC4P56524 RFC5P1-201ENST00000454419 874 ntBASIC4.42□□□□□ -1.7
HDAC4P56524 AC116533.1-201ENST00000459748 321 ntBASIC4.42□□□□□ -1.7
HDAC4P56524 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC4.42□□□□□ -1.7
HDAC4P56524 RN7SL303P-201ENST00000469773 251 ntBASIC4.42□□□□□ -1.7
HDAC4P56524 RPL21P129-201ENST00000491732 478 ntBASIC4.42□□□□□ -1.7
HDAC4P56524 BNIP3P41-201ENST00000503774 571 ntBASIC4.42□□□□□ -1.7
HDAC4P56524 KRT19P6-201ENST00000510983 209 ntBASIC4.42□□□□□ -1.7
HDAC4P56524 SOD1P3-201ENST00000518682 454 ntBASIC4.42□□□□□ -1.7
HDAC4P56524 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC4.42□□□□□ -1.7
HDAC4P56524 SNHG1-208ENST00000538266 347 ntTSL 3 BASIC4.42□□□□□ -1.7
HDAC4P56524 OSBPL9P5-201ENST00000542581 171 ntBASIC4.42□□□□□ -1.7
HDAC4P56524 AC091515.1-201ENST00000548110 679 ntBASIC4.42□□□□□ -1.7
HDAC4P56524 PSMB7P1-201ENST00000556349 514 ntBASIC4.42□□□□□ -1.7
HDAC4P56524 GTF2IP8-201ENST00000560687 584 ntBASIC4.42□□□□□ -1.7
HDAC4P56524 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC4.42□□□□□ -1.7
HDAC4P56524 AC090506.1-201ENST00000583089 572 ntTSL 4 BASIC4.42□□□□□ -1.7
HDAC4P56524 BNIP3P26-201ENST00000600827 554 ntBASIC4.42□□□□□ -1.7
HDAC4P56524 AC013444.2-201ENST00000603317 787 ntBASIC4.42□□□□□ -1.7
HDAC4P56524 AL360219.1-201ENST00000610230 366 ntBASIC4.42□□□□□ -1.7
HDAC4P56524 FAM27D1-201ENST00000612308 341 ntBASIC4.42□□□□□ -1.7
HDAC4P56524 AP000676.3-201ENST00000623299 569 ntBASIC4.42□□□□□ -1.7
HDAC4P56524 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC4.42□□□□□ -1.7
HDAC4P56524 FAM157B-203ENST00000639350 358 ntBASIC4.42□□□□□ -1.7
HDAC4P56524 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC4.42□□□□□ -1.7
HDAC4P56524 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.42□□□□□ -1.7
HDAC4P56524 AC109315.1-201ENST00000584143 1347 ntBASIC4.42□□□□□ -1.7
HDAC4P56524 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC4.42□□□□□ -1.7
HDAC4P56524 MAPK6PS3-201ENST00000403865 2162 ntBASIC4.41□□□□□ -1.7
HDAC4P56524 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.41□□□□□ -1.7
HDAC4P56524 PTPRC-201ENST00000348564 4626 ntAPPRIS ALT2 TSL 1 (best) BASIC4.41□□□□□ -1.7
HDAC4P56524 BCLAF1-202ENST00000392348 2610 ntTSL 5 BASIC4.41□□□□□ -1.7
HDAC4P56524 U2SURP-214ENST00000493598 3491 ntTSL 5 BASIC4.41□□□□□ -1.7
HDAC4P56524 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC4.41□□□□□ -1.7
HDAC4P56524 U3.15-201ENST00000365398 212 ntBASIC4.41□□□□□ -1.7
HDAC4P56524 DSTNP4-201ENST00000399472 474 ntBASIC4.41□□□□□ -1.7
HDAC4P56524 RPL31-204ENST00000409038 817 ntTSL 2 BASIC4.41□□□□□ -1.7
HDAC4P56524 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.41□□□□□ -1.7
HDAC4P56524 AC009237.2-201ENST00000421358 284 ntBASIC4.41□□□□□ -1.7
HDAC4P56524 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC4.41□□□□□ -1.7
HDAC4P56524 AC005165.1-203ENST00000423689 1281 ntTSL 3 BASIC4.41□□□□□ -1.7
HDAC4P56524 LINC01934-202ENST00000424170 686 ntTSL 4 BASIC4.41□□□□□ -1.7
HDAC4P56524 AC234779.1-201ENST00000425910 285 ntBASIC4.41□□□□□ -1.7
HDAC4P56524 AL513175.1-201ENST00000431492 780 ntBASIC4.41□□□□□ -1.7
HDAC4P56524 Z83846.1-201ENST00000446798 265 ntBASIC4.41□□□□□ -1.7
HDAC4P56524 MTCO2P25-201ENST00000447065 681 ntBASIC4.41□□□□□ -1.7
HDAC4P56524 NDUFA5P7-201ENST00000452914 242 ntBASIC4.41□□□□□ -1.7
HDAC4P56524 LINC01878-202ENST00000453965 405 ntTSL 3 BASIC4.41□□□□□ -1.7
HDAC4P56524 RPL5P24-201ENST00000463742 885 ntBASIC4.41□□□□□ -1.7
HDAC4P56524 RPL37P6-202ENST00000464216 403 ntBASIC4.41□□□□□ -1.7
HDAC4P56524 AC068633.1-201ENST00000482142 787 ntTSL 5 BASIC4.41□□□□□ -1.7
HDAC4P56524 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC4.41□□□□□ -1.7
HDAC4P56524 AC021146.8-201ENST00000507455 733 ntBASIC4.41□□□□□ -1.7
HDAC4P56524 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC4.41□□□□□ -1.7
HDAC4P56524 TET2-AS1-201ENST00000515414 537 ntTSL 5 BASIC4.41□□□□□ -1.7
HDAC4P56524 SNORA3.4-201ENST00000515969 96 ntBASIC4.41□□□□□ -1.7
HDAC4P56524 RN7SKP31-201ENST00000516354 278 ntBASIC4.41□□□□□ -1.7
HDAC4P56524 RN7SKP234-201ENST00000517173 224 ntBASIC4.41□□□□□ -1.7
HDAC4P56524 IGKV2D-23-201ENST00000518179 286 ntBASIC4.41□□□□□ -1.7
HDAC4P56524 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC4.41□□□□□ -1.7
HDAC4P56524 AP001189.2-201ENST00000527320 189 ntBASIC4.41□□□□□ -1.7
HDAC4P56524 MTND2P26-201ENST00000528255 1029 ntBASIC4.41□□□□□ -1.7
HDAC4P56524 AC005832.3-201ENST00000537929 631 ntBASIC4.41□□□□□ -1.7
HDAC4P56524 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC4.41□□□□□ -1.7
HDAC4P56524 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC4.41□□□□□ -1.7
HDAC4P56524 AC010198.2-201ENST00000550612 259 ntBASIC4.41□□□□□ -1.7
HDAC4P56524 AC128707.1-201ENST00000552230 494 ntTSL 3 BASIC4.41□□□□□ -1.7
HDAC4P56524 DUXAP1-201ENST00000556632 463 ntBASIC4.41□□□□□ -1.7
HDAC4P56524 AC091117.2-201ENST00000560324 542 ntTSL 4 BASIC4.41□□□□□ -1.7
HDAC4P56524 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC4.41□□□□□ -1.7
HDAC4P56524 AC093519.1-201ENST00000566109 298 ntBASIC4.41□□□□□ -1.7
HDAC4P56524 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC4.41□□□□□ -1.7
HDAC4P56524 AC087463.3-201ENST00000570105 415 ntTSL 3 BASIC4.41□□□□□ -1.7
HDAC4P56524 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.41□□□□□ -1.7
HDAC4P56524 AC064805.2-201ENST00000582959 523 ntTSL 4 BASIC4.41□□□□□ -1.7
HDAC4P56524 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC4.41□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 84.3 ms