Protein–RNA interactions for Protein: P55290

CDH13, Cadherin-13, humanhuman

Predictions only

Length 713 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13P55290 AC005517.2-201ENST00000424673 553 ntBASIC3.97□□□□□ -1.77
CDH13P55290 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC3.97□□□□□ -1.77
CDH13P55290 AC011742.1-201ENST00000431448 434 ntBASIC3.97□□□□□ -1.77
CDH13P55290 AL050321.1-201ENST00000432363 400 ntBASIC3.97□□□□□ -1.77
CDH13P55290 MTND2P20-201ENST00000440805 661 ntBASIC3.97□□□□□ -1.77
CDH13P55290 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH13P55290 RN7SL481P-201ENST00000477764 299 ntBASIC3.97□□□□□ -1.77
CDH13P55290 MME-AS1-201ENST00000484721 828 ntTSL 2 BASIC3.97□□□□□ -1.77
CDH13P55290 AC092994.1-201ENST00000498604 279 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH13P55290 WBP1LP4-201ENST00000505043 344 ntBASIC3.97□□□□□ -1.77
CDH13P55290 AC112198.3-201ENST00000505950 441 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH13P55290 AC079395.1-201ENST00000510981 262 ntBASIC3.97□□□□□ -1.77
CDH13P55290 AC005798.1-201ENST00000513715 387 ntBASIC3.97□□□□□ -1.77
CDH13P55290 AC099522.1-202ENST00000514718 367 ntBASIC3.97□□□□□ -1.77
CDH13P55290 RNU4ATAC10P-201ENST00000516967 122 ntBASIC3.97□□□□□ -1.77
CDH13P55290 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC3.97□□□□□ -1.77
CDH13P55290 OR6C73P-201ENST00000546432 358 ntBASIC3.97□□□□□ -1.77
CDH13P55290 TMEM106C-220ENST00000552561 810 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CDH13P55290 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC3.97□□□□□ -1.77
CDH13P55290 LINC02290-201ENST00000554187 608 ntTSL 4 BASIC3.97□□□□□ -1.77
CDH13P55290 NBEAP1-201ENST00000554452 979 ntBASIC3.97□□□□□ -1.77
CDH13P55290 PSMB7P1-201ENST00000556349 514 ntBASIC3.97□□□□□ -1.77
CDH13P55290 AC129492.2-201ENST00000577807 517 ntTSL 3 BASIC3.97□□□□□ -1.77
CDH13P55290 OR4K7P-201ENST00000580232 945 ntBASIC3.97□□□□□ -1.77
CDH13P55290 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.97□□□□□ -1.77
CDH13P55290 AC104785.1-201ENST00000603220 588 ntBASIC3.97□□□□□ -1.77
CDH13P55290 AL139286.1-201ENST00000604465 483 ntBASIC3.97□□□□□ -1.77
CDH13P55290 AC007349.4-201ENST00000608114 532 ntBASIC3.97□□□□□ -1.77
CDH13P55290 AC128687.2-201ENST00000609657 566 ntBASIC3.97□□□□□ -1.77
CDH13P55290 AC019193.2-201ENST00000610012 634 ntBASIC3.97□□□□□ -1.77
CDH13P55290 C1orf185-204ENST00000612209 899 ntAPPRIS ALT2 TSL 2 BASIC3.97□□□□□ -1.77
CDH13P55290 RN7SL722P-201ENST00000617780 284 ntBASIC3.97□□□□□ -1.77
CDH13P55290 RN7SL565P-201ENST00000618246 284 ntBASIC3.97□□□□□ -1.77
CDH13P55290 C3orf79-201ENST00000623038 580 ntTSL 1 (best) BASIC3.97□□□□□ -1.77
CDH13P55290 AP002782.1-201ENST00000623107 614 ntBASIC3.97□□□□□ -1.77
CDH13P55290 AC011944.2-201ENST00000624440 683 ntBASIC3.97□□□□□ -1.77
CDH13P55290 MUC7-201ENST00000304887 2443 ntAPPRIS P2 TSL 1 (best) BASIC3.97□□□□□ -1.77
CDH13P55290 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CDH13P55290 ZNF266-203ENST00000588933 3293 ntAPPRIS P1 TSL 1 (best) BASIC3.97□□□□□ -1.77
CDH13P55290 ZC3H11A-214ENST00000639812 11825 ntAPPRIS P1 TSL 5 BASIC3.97□□□□□ -1.77
CDH13P55290 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.96□□□□□ -1.77
CDH13P55290 AC092650.1-201ENST00000447571 1808 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDH13P55290 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDH13P55290 PSG11-201ENST00000306322 990 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDH13P55290 MT-ND2-201ENST00000361453 1042 ntAPPRIS P1 BASIC3.96□□□□□ -1.78
CDH13P55290 Y_RNA.192-201ENST00000363977 102 ntBASIC3.96□□□□□ -1.78
CDH13P55290 RNA5SP509-201ENST00000364577 119 ntBASIC3.96□□□□□ -1.78
CDH13P55290 MLLT3-201ENST00000380321 708 ntTSL 3 BASIC3.96□□□□□ -1.78
CDH13P55290 AL355379.1-201ENST00000405542 640 ntBASIC3.96□□□□□ -1.78
CDH13P55290 AC108681.1-202ENST00000417384 589 ntTSL 4 BASIC3.96□□□□□ -1.78
CDH13P55290 LINC01074-201ENST00000422527 555 ntTSL 3 BASIC3.96□□□□□ -1.78
CDH13P55290 TXNDC8-204ENST00000423740 356 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDH13P55290 RPS27AP12-201ENST00000429552 465 ntBASIC3.96□□□□□ -1.78
CDH13P55290 CKS1BP5-201ENST00000434172 273 ntBASIC3.96□□□□□ -1.78
CDH13P55290 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.96□□□□□ -1.78
CDH13P55290 NDUFS5P3-201ENST00000450668 321 ntBASIC3.96□□□□□ -1.78
CDH13P55290 RNA5SP246-201ENST00000458909 119 ntBASIC3.96□□□□□ -1.78
CDH13P55290 AC079910.1-201ENST00000477099 749 ntTSL 3 BASIC3.96□□□□□ -1.78
CDH13P55290 AC012170.1-201ENST00000495139 359 ntBASIC3.96□□□□□ -1.78
CDH13P55290 RPL29P14-201ENST00000495837 428 ntBASIC3.96□□□□□ -1.78
CDH13P55290 AC109445.1-201ENST00000512356 383 ntBASIC3.96□□□□□ -1.78
CDH13P55290 LINC01216-201ENST00000515728 824 ntTSL 5 BASIC3.96□□□□□ -1.78
CDH13P55290 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC3.96□□□□□ -1.78
CDH13P55290 GNRHR2P1-201ENST00000555315 631 ntBASIC3.96□□□□□ -1.78
CDH13P55290 AC087501.4-201ENST00000574460 235 ntTSL 5 BASIC3.96□□□□□ -1.78
CDH13P55290 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC3.96□□□□□ -1.78
CDH13P55290 ZNF616-203ENST00000597013 577 ntTSL 4 BASIC3.96□□□□□ -1.78
CDH13P55290 AC020914.4-201ENST00000597690 277 ntBASIC3.96□□□□□ -1.78
CDH13P55290 AC234771.5-201ENST00000600161 514 ntBASIC3.96□□□□□ -1.78
CDH13P55290 AC091057.2-201ENST00000602594 792 ntBASIC3.96□□□□□ -1.78
CDH13P55290 AC025946.2-201ENST00000603398 234 ntBASIC3.96□□□□□ -1.78
CDH13P55290 DUXAP3-201ENST00000603616 594 ntBASIC3.96□□□□□ -1.78
CDH13P55290 AC009220.3-201ENST00000604318 586 ntBASIC3.96□□□□□ -1.78
CDH13P55290 AC069304.2-201ENST00000605154 435 ntBASIC3.96□□□□□ -1.78
CDH13P55290 AC097478.2-201ENST00000610572 514 ntBASIC3.96□□□□□ -1.78
CDH13P55290 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDH13P55290 MSANTD4-206ENST00000617528 508 ntTSL 5 BASIC3.96□□□□□ -1.78
CDH13P55290 ZNF37BP-203ENST00000452306 1352 ntBASIC3.96□□□□□ -1.78
CDH13P55290 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.96□□□□□ -1.78
CDH13P55290 AC027287.1-201ENST00000553115 1453 ntBASIC3.96□□□□□ -1.78
CDH13P55290 DGKH-201ENST00000261491 17261 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDH13P55290 DST-201ENST00000244364 16742 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDH13P55290 ZFYVE16-201ENST00000338008 6773 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDH13P55290 LINC02431-201ENST00000503929 3601 ntTSL 1 (best) BASIC3.96□□□□□ -1.78
CDH13P55290 WHAMMP2-201ENST00000512149 5482 ntTSL 5 BASIC3.96□□□□□ -1.78
CDH13P55290 WNK3-202ENST00000375159 5403 ntAPPRIS P3 TSL 1 (best) BASIC3.96□□□□□ -1.78
CDH13P55290 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC3.95□□□□□ -1.78
CDH13P55290 XCL1-201ENST00000367818 1367 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDH13P55290 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDH13P55290 C11orf74-201ENST00000334307 863 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
CDH13P55290 RNU6-621P-201ENST00000364752 109 ntBASIC3.95□□□□□ -1.78
CDH13P55290 RNU6-657P-201ENST00000383904 107 ntBASIC3.95□□□□□ -1.78
CDH13P55290 RNU6-730P-201ENST00000383954 104 ntBASIC3.95□□□□□ -1.78
CDH13P55290 MIR3074-201ENST00000384885 81 ntBASIC3.95□□□□□ -1.78
CDH13P55290 AL024474.1-201ENST00000404655 591 ntBASIC3.95□□□□□ -1.78
CDH13P55290 RPS4XP9-201ENST00000405151 780 ntBASIC3.95□□□□□ -1.78
CDH13P55290 RNU4-25P-201ENST00000410569 230 ntBASIC3.95□□□□□ -1.78
CDH13P55290 AL078590.1-201ENST00000412602 479 ntTSL 3 BASIC3.95□□□□□ -1.78
CDH13P55290 COX7BP2-201ENST00000437976 242 ntBASIC3.95□□□□□ -1.78
CDH13P55290 AL157359.1-201ENST00000449840 424 ntTSL 3 BASIC3.95□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms