Protein–RNA interactions for Protein: P55289

CDH12, Cadherin-12, humanhuman

Predictions only

Length 794 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH12P55289 CR383658.2-201ENST00000547576 1525 ntBASIC4.11□□□□□ -1.75
CDH12P55289 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
CDH12P55289 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDH12P55289 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDH12P55289 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CDH12P55289 ZNF510-201ENST00000223428 5154 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDH12P55289 GDAP2-202ENST00000369443 8828 ntAPPRIS P1 TSL 2 BASIC4.1□□□□□ -1.75
CDH12P55289 AL079343.1-201ENST00000572358 1771 ntBASIC4.1□□□□□ -1.75
CDH12P55289 DNAJB4-201ENST00000370763 2988 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDH12P55289 ADGRL3-216ENST00000514157 4789 ntTSL 5 BASIC4.1□□□□□ -1.75
CDH12P55289 LCA5L-201ENST00000288350 2416 ntAPPRIS P1 TSL 5 BASIC4.1□□□□□ -1.75
CDH12P55289 OR52B1P-201ENST00000316506 909 ntBASIC4.1□□□□□ -1.75
CDH12P55289 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH12P55289 MIR448-201ENST00000362131 111 ntBASIC4.1□□□□□ -1.75
CDH12P55289 PTPRC-202ENST00000367364 1017 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDH12P55289 TXNDC8-203ENST00000374511 472 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CDH12P55289 Y_RNA.505-201ENST00000384489 102 ntBASIC4.1□□□□□ -1.75
CDH12P55289 Y_RNA.559-201ENST00000384686 107 ntBASIC4.1□□□□□ -1.75
CDH12P55289 MIR513A2-201ENST00000385249 127 ntBASIC4.1□□□□□ -1.75
CDH12P55289 SDHCP2-201ENST00000398565 501 ntBASIC4.1□□□□□ -1.75
CDH12P55289 MIR298-201ENST00000401212 88 ntBASIC4.1□□□□□ -1.75
CDH12P55289 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.1□□□□□ -1.75
CDH12P55289 SNORA74C-2-201ENST00000411179 201 ntBASIC4.1□□□□□ -1.75
CDH12P55289 RPS20P14-201ENST00000412545 360 ntBASIC4.1□□□□□ -1.75
CDH12P55289 AL021026.1-201ENST00000422841 658 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH12P55289 UBXN7-204ENST00000428095 1173 ntTSL 1 (best) BASIC4.1□□□□□ -1.75
CDH12P55289 MOBP-206ENST00000428261 561 ntAPPRIS ALT2 TSL 4 BASIC4.1□□□□□ -1.75
CDH12P55289 RPEP2-201ENST00000432149 701 ntBASIC4.1□□□□□ -1.75
CDH12P55289 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC4.1□□□□□ -1.75
CDH12P55289 AL512286.1-201ENST00000439244 400 ntBASIC4.1□□□□□ -1.75
CDH12P55289 ATP5C1P1-201ENST00000441945 895 ntBASIC4.1□□□□□ -1.75
CDH12P55289 RPL36AP15-201ENST00000444514 266 ntBASIC4.1□□□□□ -1.75
CDH12P55289 COX6CP2-201ENST00000444980 225 ntBASIC4.1□□□□□ -1.75
CDH12P55289 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH12P55289 PLCB1-IT1-202ENST00000451443 251 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH12P55289 AC010884.1-201ENST00000456519 642 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH12P55289 MTCO3P2-201ENST00000457365 171 ntBASIC4.1□□□□□ -1.75
CDH12P55289 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC4.1□□□□□ -1.75
CDH12P55289 RPL5P30-201ENST00000465511 891 ntBASIC4.1□□□□□ -1.75
CDH12P55289 AC092324.1-201ENST00000468671 324 ntBASIC4.1□□□□□ -1.75
CDH12P55289 AC006499.6-201ENST00000511169 607 ntBASIC4.1□□□□□ -1.75
CDH12P55289 AC079209.2-201ENST00000519107 431 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH12P55289 AC024958.1-203ENST00000520256 577 ntTSL 2 BASIC4.1□□□□□ -1.75
CDH12P55289 RGS5-218ENST00000526176 574 ntTSL 4 BASIC4.1□□□□□ -1.75
CDH12P55289 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH12P55289 AC022367.1-202ENST00000535066 537 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH12P55289 LINC02390-201ENST00000541404 560 ntTSL 4 BASIC4.1□□□□□ -1.75
CDH12P55289 AC026992.1-202ENST00000558454 421 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH12P55289 RPL23AP97-201ENST00000568955 471 ntBASIC4.1□□□□□ -1.75
CDH12P55289 LARP7P2-201ENST00000575306 125 ntBASIC4.1□□□□□ -1.75
CDH12P55289 MIR4436B2-201ENST00000581415 91 ntBASIC4.1□□□□□ -1.75
CDH12P55289 MIR4436B1-201ENST00000583272 91 ntBASIC4.1□□□□□ -1.75
CDH12P55289 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC4.1□□□□□ -1.75
CDH12P55289 AC022146.1-201ENST00000595307 847 ntBASIC4.1□□□□□ -1.75
CDH12P55289 AC010998.2-201ENST00000605549 625 ntTSL 5 BASIC4.1□□□□□ -1.75
CDH12P55289 AC239868.4-201ENST00000608318 671 ntBASIC4.1□□□□□ -1.75
CDH12P55289 AC211433.2-201ENST00000608433 387 ntBASIC4.1□□□□□ -1.75
CDH12P55289 AC015813.4-201ENST00000610469 179 ntBASIC4.1□□□□□ -1.75
CDH12P55289 LRRC2-AS1-202ENST00000614743 633 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH12P55289 AC243585.1-201ENST00000617867 607 ntTSL 3 BASIC4.1□□□□□ -1.75
CDH12P55289 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.1□□□□□ -1.75
CDH12P55289 AC098617.1-218ENST00000628836 624 ntTSL 5 BASIC4.1□□□□□ -1.75
CDH12P55289 AL355480.1-201ENST00000629041 99 ntBASIC4.1□□□□□ -1.75
CDH12P55289 DPP10-204ENST00000409163 3883 ntAPPRIS ALT2 TSL 2 BASIC4.1□□□□□ -1.75
CDH12P55289 AC125257.1-201ENST00000560400 2930 ntBASIC4.1□□□□□ -1.75
CDH12P55289 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.1□□□□□ -1.75
CDH12P55289 AL591441.1-201ENST00000618108 2247 ntTSL 2 BASIC4.1□□□□□ -1.75
CDH12P55289 FER-202ENST00000438717 1531 ntTSL 2 BASIC4.1□□□□□ -1.75
CDH12P55289 CLCA2-201ENST00000370565 4025 ntAPPRIS P1 TSL 1 (best) BASIC4.1□□□□□ -1.75
CDH12P55289 ADGRL2-205ENST00000370717 5873 ntAPPRIS ALT2 TSL 5 BASIC4.1□□□□□ -1.75
CDH12P55289 AC011266.1-201ENST00000624119 3569 ntBASIC4.09□□□□□ -1.75
CDH12P55289 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CDH12P55289 USP34-201ENST00000398571 11357 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CDH12P55289 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDH12P55289 NCK1-204ENST00000469404 2403 ntTSL 2 BASIC4.09□□□□□ -1.75
CDH12P55289 MTFR1-203ENST00000458689 2500 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CDH12P55289 MUCL1-201ENST00000308796 470 ntAPPRIS P2 TSL 1 (best) BASIC4.09□□□□□ -1.75
CDH12P55289 OR51F2-201ENST00000322110 993 ntAPPRIS ALT2 BASIC4.09□□□□□ -1.75
CDH12P55289 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC4.09□□□□□ -1.75
CDH12P55289 IFNA21-201ENST00000380225 1024 ntAPPRIS P1 BASIC4.09□□□□□ -1.75
CDH12P55289 RNU6-723P-201ENST00000383973 107 ntBASIC4.09□□□□□ -1.75
CDH12P55289 MIR659-201ENST00000384963 97 ntBASIC4.09□□□□□ -1.75
CDH12P55289 MIR323B-201ENST00000385269 82 ntBASIC4.09□□□□□ -1.75
CDH12P55289 AL121834.1-202ENST00000404494 277 ntBASIC4.09□□□□□ -1.75
CDH12P55289 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC4.09□□□□□ -1.75
CDH12P55289 RNU2-21P-201ENST00000410368 188 ntBASIC4.09□□□□□ -1.75
CDH12P55289 MIR1911-201ENST00000410783 80 ntBASIC4.09□□□□□ -1.75
CDH12P55289 RN7SKP106-201ENST00000410832 272 ntBASIC4.09□□□□□ -1.75
CDH12P55289 EIF4A1P3-201ENST00000411521 244 ntBASIC4.09□□□□□ -1.75
CDH12P55289 AC004022.2-201ENST00000413824 193 ntBASIC4.09□□□□□ -1.75
CDH12P55289 AL354766.2-201ENST00000414085 423 ntTSL 2 BASIC4.09□□□□□ -1.75
CDH12P55289 AC092647.1-201ENST00000420654 287 ntBASIC4.09□□□□□ -1.75
CDH12P55289 MTCO2P34-201ENST00000421994 607 ntBASIC4.09□□□□□ -1.75
CDH12P55289 AC234779.1-201ENST00000425910 285 ntBASIC4.09□□□□□ -1.75
CDH12P55289 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.09□□□□□ -1.75
CDH12P55289 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC4.09□□□□□ -1.75
CDH12P55289 ZYG11AP1-201ENST00000430329 837 ntBASIC4.09□□□□□ -1.75
CDH12P55289 ARHGAP26-IT1-201ENST00000433186 388 ntTSL 3 BASIC4.09□□□□□ -1.75
CDH12P55289 AC105402.2-201ENST00000438503 358 ntBASIC4.09□□□□□ -1.75
CDH12P55289 AC069285.2-201ENST00000440210 275 ntBASIC4.09□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 113 ms