Protein–RNA interactions for Protein: P54868

HMGCS2, Hydroxymethylglutaryl-CoA synthase, mitochondrial, humanhuman

Predictions only

Length 508 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2P54868 AFTPH-205ENST00000422803 1525 ntTSL 5 BASIC3.9□□□□□ -1.78
HMGCS2P54868 EMCN-209ENST00000511970 1377 ntAPPRIS ALT2 TSL 2 BASIC3.9□□□□□ -1.78
HMGCS2P54868 TAS2R20-201ENST00000538986 1381 ntAPPRIS P1 BASIC3.9□□□□□ -1.78
HMGCS2P54868 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.9□□□□□ -1.78
HMGCS2P54868 AC093311.1-201ENST00000506586 2021 ntBASIC3.9□□□□□ -1.78
HMGCS2P54868 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.78
HMGCS2P54868 BMP5-201ENST00000370830 3952 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.78
HMGCS2P54868 AC007390.2-201ENST00000606229 3803 ntBASIC3.9□□□□□ -1.78
HMGCS2P54868 RNF13-202ENST00000361785 1939 ntTSL 2 BASIC3.9□□□□□ -1.78
HMGCS2P54868 MIR16-2-201ENST00000362117 81 ntBASIC3.9□□□□□ -1.79
HMGCS2P54868 MIR448-201ENST00000362131 111 ntBASIC3.9□□□□□ -1.79
HMGCS2P54868 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC3.9□□□□□ -1.79
HMGCS2P54868 TMEM225-201ENST00000375026 1107 ntAPPRIS P2 TSL 1 (best) BASIC3.9□□□□□ -1.79
HMGCS2P54868 HMGB1P10-201ENST00000395823 563 ntBASIC3.9□□□□□ -1.79
HMGCS2P54868 RNA5SP104-201ENST00000410989 118 ntBASIC3.9□□□□□ -1.79
HMGCS2P54868 AC009505.1-201ENST00000413151 424 ntTSL 2 BASIC3.9□□□□□ -1.79
HMGCS2P54868 AL445183.3-201ENST00000414168 502 ntBASIC3.9□□□□□ -1.79
HMGCS2P54868 BX664727.1-201ENST00000416024 466 ntBASIC3.9□□□□□ -1.79
HMGCS2P54868 AC006989.1-201ENST00000427212 131 ntBASIC3.9□□□□□ -1.79
HMGCS2P54868 MTCO1P52-201ENST00000433928 531 ntBASIC3.9□□□□□ -1.79
HMGCS2P54868 AC078993.1-203ENST00000435789 1037 ntTSL 5 BASIC3.9□□□□□ -1.79
HMGCS2P54868 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC3.9□□□□□ -1.79
HMGCS2P54868 RPS27P5-201ENST00000444247 244 ntBASIC3.9□□□□□ -1.79
HMGCS2P54868 AC069540.1-201ENST00000446320 988 ntBASIC3.9□□□□□ -1.79
HMGCS2P54868 AC011196.1-201ENST00000451816 595 ntTSL 2 BASIC3.9□□□□□ -1.79
HMGCS2P54868 RPL7P48-201ENST00000461513 746 ntBASIC3.9□□□□□ -1.79
HMGCS2P54868 AC006148.2-201ENST00000467017 650 ntTSL 2 BASIC3.9□□□□□ -1.79
HMGCS2P54868 TMED11P-201ENST00000479478 690 ntBASIC3.9□□□□□ -1.79
HMGCS2P54868 RPS3AP43-201ENST00000479743 781 ntBASIC3.9□□□□□ -1.79
HMGCS2P54868 AC006445.1-201ENST00000491925 405 ntBASIC3.9□□□□□ -1.79
HMGCS2P54868 NAMPTP2-201ENST00000505629 1115 ntBASIC3.9□□□□□ -1.79
HMGCS2P54868 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.9□□□□□ -1.79
HMGCS2P54868 AC005798.1-201ENST00000513715 387 ntBASIC3.9□□□□□ -1.79
HMGCS2P54868 C8orf22-204ENST00000522267 739 ntAPPRIS ALT1 TSL 2 BASIC3.9□□□□□ -1.79
HMGCS2P54868 AP006245.1-201ENST00000522549 120 ntBASIC3.9□□□□□ -1.79
HMGCS2P54868 AC018616.1-201ENST00000524085 546 ntTSL 5 BASIC3.9□□□□□ -1.79
HMGCS2P54868 AC013762.1-201ENST00000531136 467 ntTSL 3 BASIC3.9□□□□□ -1.79
HMGCS2P54868 AC068339.2-201ENST00000534395 618 ntBASIC3.9□□□□□ -1.79
HMGCS2P54868 AL160191.1-201ENST00000555480 566 ntTSL 4 BASIC3.9□□□□□ -1.79
HMGCS2P54868 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC3.9□□□□□ -1.79
HMGCS2P54868 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC3.9□□□□□ -1.79
HMGCS2P54868 AC106734.1-201ENST00000568646 663 ntBASIC3.9□□□□□ -1.79
HMGCS2P54868 NF1P5-201ENST00000588287 448 ntBASIC3.9□□□□□ -1.79
HMGCS2P54868 AL451007.1-201ENST00000595491 289 ntBASIC3.9□□□□□ -1.79
HMGCS2P54868 AC100781.1-202ENST00000597906 463 ntTSL 5 BASIC3.9□□□□□ -1.79
HMGCS2P54868 MTATP6P2-201ENST00000603319 678 ntBASIC3.9□□□□□ -1.79
HMGCS2P54868 AC026741.1-201ENST00000605892 482 ntBASIC3.9□□□□□ -1.79
HMGCS2P54868 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.9□□□□□ -1.79
HMGCS2P54868 IL1RL1-204ENST00000409584 2693 ntTSL 5 BASIC3.9□□□□□ -1.79
HMGCS2P54868 OSTN-202ENST00000445281 3134 ntTSL 5 BASIC3.9□□□□□ -1.79
HMGCS2P54868 ZFYVE16-202ENST00000505560 6599 ntAPPRIS P1 TSL 1 (best) BASIC3.9□□□□□ -1.79
HMGCS2P54868 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC3.89□□□□□ -1.79
HMGCS2P54868 MME-211ENST00000492661 2854 ntAPPRIS P1 TSL 2 BASIC3.89□□□□□ -1.79
HMGCS2P54868 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HMGCS2P54868 RNA5-8SP4-201ENST00000365096 150 ntBASIC3.89□□□□□ -1.79
HMGCS2P54868 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC3.89□□□□□ -1.79
HMGCS2P54868 C4orf47-201ENST00000378850 1134 ntAPPRIS P1 TSL 1 (best) BASIC3.89□□□□□ -1.79
HMGCS2P54868 STATH-202ENST00000381060 534 ntTSL 1 (best) BASIC3.89□□□□□ -1.79
HMGCS2P54868 RNU4-31P-201ENST00000384211 141 ntBASIC3.89□□□□□ -1.79
HMGCS2P54868 HMGN2P8-201ENST00000391458 268 ntBASIC3.89□□□□□ -1.79
HMGCS2P54868 POLR1D-202ENST00000399696 668 ntAPPRIS ALT1 TSL 5 BASIC3.89□□□□□ -1.79
HMGCS2P54868 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.89□□□□□ -1.79
HMGCS2P54868 BTBD9-AS1-201ENST00000412822 560 ntTSL 2 BASIC3.89□□□□□ -1.79
HMGCS2P54868 Z99755.1-201ENST00000414048 380 ntBASIC3.89□□□□□ -1.79
HMGCS2P54868 AC023128.2-201ENST00000420880 1223 ntBASIC3.89□□□□□ -1.79
HMGCS2P54868 PNRC2P1-201ENST00000423940 420 ntBASIC3.89□□□□□ -1.79
HMGCS2P54868 USP12PY-201ENST00000427677 1064 ntBASIC3.89□□□□□ -1.79
HMGCS2P54868 CBX1P4-201ENST00000439415 457 ntBASIC3.89□□□□□ -1.79
HMGCS2P54868 NDUFS5P3-201ENST00000450668 321 ntBASIC3.89□□□□□ -1.79
HMGCS2P54868 TPMTP4-201ENST00000450749 678 ntBASIC3.89□□□□□ -1.79
HMGCS2P54868 FGF7P3-201ENST00000454645 303 ntBASIC3.89□□□□□ -1.79
HMGCS2P54868 RPL27AP5-201ENST00000469428 449 ntBASIC3.89□□□□□ -1.79
HMGCS2P54868 RPS26P15-201ENST00000488067 348 ntBASIC3.89□□□□□ -1.79
HMGCS2P54868 HMGB1P21-201ENST00000502313 581 ntBASIC3.89□□□□□ -1.79
HMGCS2P54868 AC020893.1-201ENST00000502452 580 ntBASIC3.89□□□□□ -1.79
HMGCS2P54868 OR5H3P-201ENST00000502817 919 ntBASIC3.89□□□□□ -1.79
HMGCS2P54868 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.89□□□□□ -1.79
HMGCS2P54868 AC112198.1-201ENST00000505369 1220 ntBASIC3.89□□□□□ -1.79
HMGCS2P54868 MTCO3P27-201ENST00000514397 196 ntBASIC3.89□□□□□ -1.79
HMGCS2P54868 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC3.89□□□□□ -1.79
HMGCS2P54868 Vault.1-201ENST00000516474 102 ntBASIC3.89□□□□□ -1.79
HMGCS2P54868 AC024224.1-201ENST00000538284 609 ntBASIC3.89□□□□□ -1.79
HMGCS2P54868 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.89□□□□□ -1.79
HMGCS2P54868 APAF1-207ENST00000547743 651 ntTSL 3 BASIC3.89□□□□□ -1.79
HMGCS2P54868 AL109741.3-201ENST00000561748 592 ntBASIC3.89□□□□□ -1.79
HMGCS2P54868 AL133457.1-201ENST00000564251 987 ntBASIC3.89□□□□□ -1.79
HMGCS2P54868 AC091563.1-202ENST00000574086 522 ntTSL 5 BASIC3.89□□□□□ -1.79
HMGCS2P54868 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC3.89□□□□□ -1.79
HMGCS2P54868 AC124312.4-201ENST00000605533 310 ntBASIC3.89□□□□□ -1.79
HMGCS2P54868 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC3.89□□□□□ -1.79
HMGCS2P54868 MIR6852-201ENST00000621699 66 ntBASIC3.89□□□□□ -1.79
HMGCS2P54868 AL049777.1-201ENST00000622740 518 ntBASIC3.89□□□□□ -1.79
HMGCS2P54868 AC006386.2-201ENST00000624491 75 ntBASIC3.89□□□□□ -1.79
HMGCS2P54868 AC015726.3-201ENST00000624501 418 ntBASIC3.89□□□□□ -1.79
HMGCS2P54868 AC012005.1-201ENST00000624575 75 ntBASIC3.89□□□□□ -1.79
HMGCS2P54868 METTL8-218ENST00000638989 876 ntTSL 5 BASIC3.89□□□□□ -1.79
HMGCS2P54868 METTL8-219ENST00000640734 726 ntTSL 2 BASIC3.89□□□□□ -1.79
HMGCS2P54868 ZNF807-201ENST00000328088 1707 ntBASIC3.89□□□□□ -1.79
HMGCS2P54868 AC008432.1-201ENST00000615912 1320 ntBASIC3.89□□□□□ -1.79
HMGCS2P54868 MFSD8-213ENST00000641134 1327 ntBASIC3.89□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 97.4 ms