Protein–RNA interactions for Protein: P52948

NUP98, Nuclear pore complex protein Nup98-Nup96, humanhuman

Predictions only

Length 1,817 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98P52948 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.51□□□□□ -1.85
NUP98P52948 AC004972.1-201ENST00000623934 2209 ntBASIC3.51□□□□□ -1.85
NUP98P52948 RNA5SP383-201ENST00000362934 120 ntBASIC3.51□□□□□ -1.85
NUP98P52948 MIR512-1-201ENST00000384913 84 ntBASIC3.51□□□□□ -1.85
NUP98P52948 RNA5SP274-201ENST00000410484 108 ntBASIC3.51□□□□□ -1.85
NUP98P52948 AL359195.1-201ENST00000416657 339 ntTSL 3 BASIC3.51□□□□□ -1.85
NUP98P52948 LINC00412-201ENST00000444744 420 ntTSL 2 BASIC3.51□□□□□ -1.85
NUP98P52948 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC3.51□□□□□ -1.85
NUP98P52948 AC009097.3-201ENST00000563557 1018 ntBASIC3.51□□□□□ -1.85
NUP98P52948 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.51□□□□□ -1.85
NUP98P52948 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.51□□□□□ -1.85
NUP98P52948 AL158196.1-201ENST00000616786 434 ntBASIC3.51□□□□□ -1.85
NUP98P52948 AC243829.7-201ENST00000633081 225 ntBASIC3.51□□□□□ -1.85
NUP98P52948 RAPGEF6-201ENST00000296859 5618 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
NUP98P52948 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.51□□□□□ -1.85
NUP98P52948 STEAP4-202ENST00000380079 9988 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NUP98P52948 FER-202ENST00000438717 1531 ntTSL 2 BASIC3.5□□□□□ -1.85
NUP98P52948 MTCO1P24-201ENST00000515438 1558 ntBASIC3.5□□□□□ -1.85
NUP98P52948 HERC4-204ENST00000395198 4445 ntAPPRIS ALT1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NUP98P52948 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NUP98P52948 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC3.5□□□□□ -1.85
NUP98P52948 AL356057.3-201ENST00000402607 340 ntBASIC3.5□□□□□ -1.85
NUP98P52948 AL583834.1-201ENST00000406943 343 ntBASIC3.5□□□□□ -1.85
NUP98P52948 AC063976.3-201ENST00000426849 329 ntBASIC3.5□□□□□ -1.85
NUP98P52948 AL357832.1-201ENST00000427460 420 ntTSL 3 BASIC3.5□□□□□ -1.85
NUP98P52948 RPL7P36-201ENST00000444633 681 ntBASIC3.5□□□□□ -1.85
NUP98P52948 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC3.5□□□□□ -1.85
NUP98P52948 RPL29P29-201ENST00000448725 423 ntBASIC3.5□□□□□ -1.85
NUP98P52948 DNAJC19P8-201ENST00000452887 259 ntBASIC3.5□□□□□ -1.85
NUP98P52948 RN7SL633P-201ENST00000488974 297 ntBASIC3.5□□□□□ -1.85
NUP98P52948 ZFPM2-AS1-207ENST00000524045 987 ntTSL 3 BASIC3.5□□□□□ -1.85
NUP98P52948 AC078909.1-201ENST00000559509 464 ntTSL 2 BASIC3.5□□□□□ -1.85
NUP98P52948 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC3.5□□□□□ -1.85
NUP98P52948 AL035413.2-201ENST00000604801 525 ntBASIC3.5□□□□□ -1.85
NUP98P52948 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.5□□□□□ -1.85
NUP98P52948 EXTL2-201ENST00000370113 2835 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
NUP98P52948 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
NUP98P52948 AC012020.1-201ENST00000624541 1728 ntBASIC3.5□□□□□ -1.85
NUP98P52948 FRS2-201ENST00000397997 6550 ntAPPRIS P1 TSL 5 BASIC3.5□□□□□ -1.85
NUP98P52948 OR13C3-201ENST00000374781 1108 ntBASIC3.49□□□□□ -1.85
NUP98P52948 AC013470.3-201ENST00000420252 1194 ntBASIC3.49□□□□□ -1.85
NUP98P52948 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC3.49□□□□□ -1.85
NUP98P52948 AL590639.1-201ENST00000456484 337 ntBASIC3.49□□□□□ -1.85
NUP98P52948 RN7SL442P-201ENST00000473804 320 ntBASIC3.49□□□□□ -1.85
NUP98P52948 IGKV2D-23-201ENST00000518179 286 ntBASIC3.49□□□□□ -1.85
NUP98P52948 AL583810.3-201ENST00000555713 584 ntTSL 4 BASIC3.49□□□□□ -1.85
NUP98P52948 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.49□□□□□ -1.85
NUP98P52948 AC067852.4-201ENST00000590314 478 ntBASIC3.49□□□□□ -1.85
NUP98P52948 SMIM2-AS1-204ENST00000619472 746 ntTSL 3 BASIC3.49□□□□□ -1.85
NUP98P52948 U7.8-201ENST00000619968 63 ntBASIC3.49□□□□□ -1.85
NUP98P52948 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC3.49□□□□□ -1.85
NUP98P52948 MUC7-202ENST00000413702 2540 ntAPPRIS P2 TSL 4 BASIC3.49□□□□□ -1.85
NUP98P52948 AC138393.1-206ENST00000540997 1886 ntBASIC3.49□□□□□ -1.85
NUP98P52948 SIRT1-202ENST00000403579 3333 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NUP98P52948 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NUP98P52948 AC107081.3-201ENST00000612715 2034 ntBASIC3.49□□□□□ -1.85
NUP98P52948 AC026523.1-202ENST00000559363 1401 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NUP98P52948 PWAR6-201ENST00000552334 4618 ntBASIC3.49□□□□□ -1.85
NUP98P52948 CCDC121-201ENST00000324364 2342 ntAPPRIS P3 TSL 1 (best) BASIC3.49□□□□□ -1.85
NUP98P52948 HSPB11-202ENST00000371376 765 ntTSL 3 BASIC3.49□□□□□ -1.85
NUP98P52948 RPL21P3-201ENST00000395517 478 ntBASIC3.49□□□□□ -1.85
NUP98P52948 B3GALNT1P1-201ENST00000420569 975 ntBASIC3.49□□□□□ -1.85
NUP98P52948 SNRPFP2-201ENST00000440710 251 ntBASIC3.49□□□□□ -1.85
NUP98P52948 AC146507.2-201ENST00000460608 476 ntBASIC3.49□□□□□ -1.85
NUP98P52948 AC114781.4-201ENST00000513707 639 ntBASIC3.49□□□□□ -1.85
NUP98P52948 AC007954.1-201ENST00000554198 494 ntBASIC3.49□□□□□ -1.85
NUP98P52948 EAF1-AS1-211ENST00000610011 316 ntTSL 5 BASIC3.49□□□□□ -1.85
NUP98P52948 PIK3C2G-206ENST00000538779 4963 ntTSL 5 BASIC3.49□□□□□ -1.85
NUP98P52948 XIRP2-204ENST00000409273 12269 ntTSL 1 (best) BASIC3.49□□□□□ -1.85
NUP98P52948 AL049780.3-201ENST00000624612 1583 ntBASIC3.48□□□□□ -1.85
NUP98P52948 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC3.48□□□□□ -1.85
NUP98P52948 RAC1P3-201ENST00000416129 580 ntBASIC3.48□□□□□ -1.85
NUP98P52948 RPS29P6-201ENST00000438196 145 ntBASIC3.48□□□□□ -1.85
NUP98P52948 RPL12P22-201ENST00000519073 490 ntBASIC3.48□□□□□ -1.85
NUP98P52948 AC022146.1-201ENST00000595307 847 ntBASIC3.48□□□□□ -1.85
NUP98P52948 OR6R2P-201ENST00000609216 300 ntBASIC3.48□□□□□ -1.85
NUP98P52948 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC3.48□□□□□ -1.85
NUP98P52948 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NUP98P52948 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC3.48□□□□□ -1.85
NUP98P52948 AC104446.1-201ENST00000613728 1321 ntBASIC3.48□□□□□ -1.85
NUP98P52948 FRYL-205ENST00000503238 11103 ntAPPRIS P1 TSL 5 BASIC3.47□□□□□ -1.85
NUP98P52948 AL672167.1-206ENST00000356293 943 ntBASIC3.47□□□□□ -1.85
NUP98P52948 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC3.47□□□□□ -1.85
NUP98P52948 UQCRHP3-201ENST00000451503 251 ntBASIC3.47□□□□□ -1.85
NUP98P52948 AL121852.1-201ENST00000554665 430 ntTSL 3 BASIC3.47□□□□□ -1.85
NUP98P52948 AL590808.1-201ENST00000618696 141 ntBASIC3.47□□□□□ -1.85
NUP98P52948 AP003499.2-201ENST00000624100 483 ntBASIC3.47□□□□□ -1.85
NUP98P52948 OR12D1-207ENST00000514827 1712 ntAPPRIS P1 BASIC3.47□□□□□ -1.85
NUP98P52948 CPB2-202ENST00000439329 1655 ntTSL 5 BASIC3.47□□□□□ -1.85
NUP98P52948 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC3.47□□□□□ -1.85
NUP98P52948 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC3.47□□□□□ -1.85
NUP98P52948 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.47□□□□□ -1.85
NUP98P52948 AL512430.2-201ENST00000406786 339 ntBASIC3.47□□□□□ -1.85
NUP98P52948 GLS-203ENST00000409215 632 ntTSL 4 BASIC3.47□□□□□ -1.85
NUP98P52948 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC3.47□□□□□ -1.85
NUP98P52948 AC100848.1-201ENST00000417298 637 ntTSL 3 BASIC3.47□□□□□ -1.85
NUP98P52948 OR2AS1P-201ENST00000427827 319 ntBASIC3.47□□□□□ -1.85
NUP98P52948 AC105402.2-201ENST00000438503 358 ntBASIC3.47□□□□□ -1.85
NUP98P52948 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.47□□□□□ -1.85
NUP98P52948 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.47□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 130 ms