Protein–RNA interactions for Protein: P52945

PDX1, Pancreas/duodenum homeobox protein 1, humanhuman

Predictions only

Length 283 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDX1P52945 AL138749.1-201ENST00000397864 791 ntTSL 5 BASIC3.93□□□□□ -1.78
PDX1P52945 RPL23AP47-201ENST00000408017 460 ntBASIC3.93□□□□□ -1.78
PDX1P52945 AL008987.1-201ENST00000415528 237 ntBASIC3.93□□□□□ -1.78
PDX1P52945 HMGB1P49-201ENST00000418882 569 ntBASIC3.93□□□□□ -1.78
PDX1P52945 MTCO2P21-201ENST00000419780 677 ntBASIC3.93□□□□□ -1.78
PDX1P52945 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC3.93□□□□□ -1.78
PDX1P52945 CYP4F29P-201ENST00000420685 446 ntBASIC3.93□□□□□ -1.78
PDX1P52945 LINC02263-202ENST00000420701 597 ntTSL 5 BASIC3.93□□□□□ -1.78
PDX1P52945 AC233981.1-201ENST00000423224 461 ntBASIC3.93□□□□□ -1.78
PDX1P52945 AC018742.1-201ENST00000435237 488 ntTSL 3 BASIC3.93□□□□□ -1.78
PDX1P52945 MTCO2P20-201ENST00000437339 673 ntBASIC3.93□□□□□ -1.78
PDX1P52945 COX7BP2-201ENST00000437976 242 ntBASIC3.93□□□□□ -1.78
PDX1P52945 MTND1P26-201ENST00000440488 538 ntBASIC3.93□□□□□ -1.78
PDX1P52945 LINC00704-202ENST00000443994 418 ntTSL 2 BASIC3.93□□□□□ -1.78
PDX1P52945 CLEC4E-202ENST00000446457 701 ntTSL 3 BASIC3.93□□□□□ -1.78
PDX1P52945 AC018731.1-201ENST00000447078 576 ntTSL 4 BASIC3.93□□□□□ -1.78
PDX1P52945 NDUFA5P7-201ENST00000452914 242 ntBASIC3.93□□□□□ -1.78
PDX1P52945 RFC5P1-201ENST00000454419 874 ntBASIC3.93□□□□□ -1.78
PDX1P52945 NECAP1P2-201ENST00000455668 727 ntBASIC3.93□□□□□ -1.78
PDX1P52945 AL157400.4-201ENST00000455699 667 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PDX1P52945 snoU13.7-201ENST00000459220 104 ntBASIC3.93□□□□□ -1.78
PDX1P52945 FAIM-205ENST00000464668 641 ntAPPRIS P3 TSL 5 BASIC3.93□□□□□ -1.78
PDX1P52945 AC108734.3-201ENST00000481241 1165 ntBASIC3.93□□□□□ -1.78
PDX1P52945 AC114912.1-201ENST00000503394 546 ntTSL 3 BASIC3.93□□□□□ -1.78
PDX1P52945 BNIP3P41-201ENST00000503774 571 ntBASIC3.93□□□□□ -1.78
PDX1P52945 LINC02118-201ENST00000505899 407 ntTSL 3 BASIC3.93□□□□□ -1.78
PDX1P52945 AC109464.3-201ENST00000509456 204 ntTSL 5 BASIC3.93□□□□□ -1.78
PDX1P52945 TRMT10BP1-201ENST00000519377 943 ntBASIC3.93□□□□□ -1.78
PDX1P52945 CA1-215ENST00000522389 551 ntTSL 3 BASIC3.93□□□□□ -1.78
PDX1P52945 TPT1-AS1-216ENST00000522845 403 ntTSL 3 BASIC3.93□□□□□ -1.78
PDX1P52945 AP000756.1-201ENST00000532606 679 ntTSL 2 BASIC3.93□□□□□ -1.78
PDX1P52945 PLCZ1-203ENST00000534932 525 ntTSL 4 BASIC3.93□□□□□ -1.78
PDX1P52945 AC046130.2-201ENST00000537655 794 ntTSL 3 BASIC3.93□□□□□ -1.78
PDX1P52945 AC073530.1-202ENST00000538008 508 ntTSL 2 BASIC3.93□□□□□ -1.78
PDX1P52945 AL133370.1-201ENST00000554679 537 ntTSL 3 BASIC3.93□□□□□ -1.78
PDX1P52945 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC3.93□□□□□ -1.78
PDX1P52945 AC022069.1-201ENST00000582910 658 ntBASIC3.93□□□□□ -1.78
PDX1P52945 MIR4512-201ENST00000583257 77 ntBASIC3.93□□□□□ -1.78
PDX1P52945 MIR5684-201ENST00000585074 65 ntBASIC3.93□□□□□ -1.78
PDX1P52945 LINC01930-201ENST00000602672 870 ntTSL 5 BASIC3.93□□□□□ -1.78
PDX1P52945 AC025588.2-201ENST00000604851 466 ntBASIC3.93□□□□□ -1.78
PDX1P52945 AL592436.1-201ENST00000605135 558 ntBASIC3.93□□□□□ -1.78
PDX1P52945 AC090948.3-201ENST00000606713 551 ntTSL 4 BASIC3.93□□□□□ -1.78
PDX1P52945 AC080013.3-201ENST00000606839 578 ntBASIC3.93□□□□□ -1.78
PDX1P52945 IL33-205ENST00000611532 757 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PDX1P52945 AC064801.1-201ENST00000612025 407 ntBASIC3.93□□□□□ -1.78
PDX1P52945 AL354798.1-201ENST00000622505 329 ntBASIC3.93□□□□□ -1.78
PDX1P52945 AC013470.2-206ENST00000636804 771 ntAPPRIS P5 TSL 5 BASIC3.93□□□□□ -1.78
PDX1P52945 VEPH1-203ENST00000392833 3979 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PDX1P52945 MLH1-212ENST00000455445 2296 ntTSL 2 BASIC3.93□□□□□ -1.78
PDX1P52945 AC020571.1-202ENST00000433933 1413 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PDX1P52945 ASNSP1-201ENST00000518311 1939 ntBASIC3.93□□□□□ -1.78
PDX1P52945 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
PDX1P52945 IPO11-202ENST00000409296 3564 ntTSL 2 BASIC3.93□□□□□ -1.78
PDX1P52945 TIMM9-202ENST00000395159 1336 ntAPPRIS P1 TSL 1 (best) BASIC3.93□□□□□ -1.78
PDX1P52945 RIMS2-201ENST00000262231 3854 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
PDX1P52945 RAPH1-203ENST00000374493 3909 ntAPPRIS ALT2 TSL 5 BASIC3.92□□□□□ -1.78
PDX1P52945 ZMYND11-217ENST00000627286 3914 ntTSL 5 BASIC3.92□□□□□ -1.78
PDX1P52945 TJP1-204ENST00000400011 6764 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
PDX1P52945 ATP7A-201ENST00000341514 8483 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PDX1P52945 AC011266.1-201ENST00000624119 3569 ntBASIC3.92□□□□□ -1.78
PDX1P52945 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.92□□□□□ -1.78
PDX1P52945 YWHAZ-219ENST00000522542 1394 ntTSL 2 BASIC3.92□□□□□ -1.78
PDX1P52945 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PDX1P52945 AK9-202ENST00000355283 2499 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PDX1P52945 DTNA-208ENST00000554864 1680 ntAPPRIS ALT2 TSL 1 (best) BASIC3.92□□□□□ -1.78
PDX1P52945 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC3.92□□□□□ -1.78
PDX1P52945 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC3.92□□□□□ -1.78
PDX1P52945 RNU6-115P-201ENST00000364310 107 ntBASIC3.92□□□□□ -1.78
PDX1P52945 SNORA73.2-201ENST00000364946 201 ntBASIC3.92□□□□□ -1.78
PDX1P52945 MIR449B-201ENST00000384995 97 ntBASIC3.92□□□□□ -1.78
PDX1P52945 PVALB-202ENST00000404171 422 ntTSL 2 BASIC3.92□□□□□ -1.78
PDX1P52945 MEIG1-202ENST00000407572 625 ntAPPRIS P1 TSL 2 BASIC3.92□□□□□ -1.78
PDX1P52945 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC3.92□□□□□ -1.78
PDX1P52945 MRPS36P1-201ENST00000421291 307 ntBASIC3.92□□□□□ -1.78
PDX1P52945 AC006076.1-201ENST00000423233 345 ntTSL 3 BASIC3.92□□□□□ -1.78
PDX1P52945 NAALADL2-AS2-201ENST00000424690 1038 ntTSL 5 BASIC3.92□□□□□ -1.78
PDX1P52945 USP9YP22-201ENST00000438971 294 ntBASIC3.92□□□□□ -1.78
PDX1P52945 RPL23AP89-201ENST00000439324 255 ntBASIC3.92□□□□□ -1.78
PDX1P52945 RPS4XP4-201ENST00000443195 763 ntBASIC3.92□□□□□ -1.78
PDX1P52945 NOTCH2P1-201ENST00000443481 624 ntBASIC3.92□□□□□ -1.78
PDX1P52945 RPL5P30-201ENST00000465511 891 ntBASIC3.92□□□□□ -1.78
PDX1P52945 RPL7P1-201ENST00000468161 747 ntBASIC3.92□□□□□ -1.78
PDX1P52945 RPL7P9-201ENST00000468715 747 ntBASIC3.92□□□□□ -1.78
PDX1P52945 MDM2-217ENST00000478070 692 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PDX1P52945 AC098862.1-201ENST00000504991 413 ntBASIC3.92□□□□□ -1.78
PDX1P52945 AC097480.1-201ENST00000509416 712 ntTSL 3 BASIC3.92□□□□□ -1.78
PDX1P52945 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC3.92□□□□□ -1.78
PDX1P52945 AC018797.3-201ENST00000513388 1241 ntBASIC3.92□□□□□ -1.78
PDX1P52945 RNU6-1225P-201ENST00000516336 65 ntBASIC3.92□□□□□ -1.78
PDX1P52945 SNORA48.10-201ENST00000516965 160 ntBASIC3.92□□□□□ -1.78
PDX1P52945 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.92□□□□□ -1.78
PDX1P52945 AP000790.1-201ENST00000528891 737 ntBASIC3.92□□□□□ -1.78
PDX1P52945 GTF2IP8-201ENST00000560687 584 ntBASIC3.92□□□□□ -1.78
PDX1P52945 VN1R78P-201ENST00000597393 564 ntBASIC3.92□□□□□ -1.78
PDX1P52945 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC3.92□□□□□ -1.78
PDX1P52945 AC021755.4-201ENST00000616620 456 ntBASIC3.92□□□□□ -1.78
PDX1P52945 MIR6864-201ENST00000617935 70 ntBASIC3.92□□□□□ -1.78
PDX1P52945 AC096751.1-201ENST00000515178 2202 ntTSL 1 (best) BASIC3.92□□□□□ -1.78
PDX1P52945 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.92□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 91.2 ms