Protein–RNA interactions for Protein: P43489

TNFRSF4, Tumor necrosis factor receptor superfamily member 4, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF4P43489 ELF2-203ENST00000379550 3278 ntTSL 5 BASIC3.77□□□□□ -1.81
TNFRSF4P43489 CFHR3-201ENST00000367425 1645 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TNFRSF4P43489 OR10D3-202ENST00000641351 3561 ntAPPRIS P1 BASIC3.77□□□□□ -1.81
TNFRSF4P43489 FZD3-201ENST00000240093 13736 ntAPPRIS P1 TSL 1 (best) BASIC3.77□□□□□ -1.81
TNFRSF4P43489 MTND5P1-201ENST00000445440 1375 ntBASIC3.76□□□□□ -1.81
TNFRSF4P43489 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC3.76□□□□□ -1.81
TNFRSF4P43489 LINC01355-201ENST00000566551 5444 ntBASIC3.76□□□□□ -1.81
TNFRSF4P43489 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TNFRSF4P43489 LINC01625-201ENST00000454788 1690 ntTSL 2 BASIC3.76□□□□□ -1.81
TNFRSF4P43489 RNU6-525P-201ENST00000363685 104 ntBASIC3.76□□□□□ -1.81
TNFRSF4P43489 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC3.76□□□□□ -1.81
TNFRSF4P43489 SNORA9-201ENST00000384215 133 ntBASIC3.76□□□□□ -1.81
TNFRSF4P43489 GSTA8P-201ENST00000404253 637 ntBASIC3.76□□□□□ -1.81
TNFRSF4P43489 RNA5SP146-201ENST00000410743 123 ntBASIC3.76□□□□□ -1.81
TNFRSF4P43489 AC073264.1-201ENST00000411508 416 ntBASIC3.76□□□□□ -1.81
TNFRSF4P43489 AC245054.1-201ENST00000420944 258 ntBASIC3.76□□□□□ -1.81
TNFRSF4P43489 MTND2P9-201ENST00000422293 931 ntBASIC3.76□□□□□ -1.81
TNFRSF4P43489 PTP4A1P7-201ENST00000423476 514 ntBASIC3.76□□□□□ -1.81
TNFRSF4P43489 AC004870.4-201ENST00000424359 360 ntTSL 2 BASIC3.76□□□□□ -1.81
TNFRSF4P43489 AL161640.1-201ENST00000429507 390 ntTSL 2 BASIC3.76□□□□□ -1.81
TNFRSF4P43489 CKS1BP5-201ENST00000434172 273 ntBASIC3.76□□□□□ -1.81
TNFRSF4P43489 AC073063.1-201ENST00000434352 607 ntBASIC3.76□□□□□ -1.81
TNFRSF4P43489 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC3.76□□□□□ -1.81
TNFRSF4P43489 AL117341.1-201ENST00000437213 373 ntTSL 5 BASIC3.76□□□□□ -1.81
TNFRSF4P43489 RPL23AP33-201ENST00000442301 452 ntBASIC3.76□□□□□ -1.81
TNFRSF4P43489 AL161725.2-201ENST00000442442 403 ntTSL 3 BASIC3.76□□□□□ -1.81
TNFRSF4P43489 AC007099.2-201ENST00000444852 336 ntTSL 5 BASIC3.76□□□□□ -1.81
TNFRSF4P43489 RPL7P59-201ENST00000447700 943 ntBASIC3.76□□□□□ -1.81
TNFRSF4P43489 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC3.76□□□□□ -1.81
TNFRSF4P43489 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC3.76□□□□□ -1.81
TNFRSF4P43489 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TNFRSF4P43489 AC018797.3-201ENST00000513388 1241 ntBASIC3.76□□□□□ -1.81
TNFRSF4P43489 LINC02492-204ENST00000515660 584 ntTSL 2 BASIC3.76□□□□□ -1.81
TNFRSF4P43489 RN7SKP13-201ENST00000515933 244 ntBASIC3.76□□□□□ -1.81
TNFRSF4P43489 HMGB1P19-201ENST00000517578 577 ntBASIC3.76□□□□□ -1.81
TNFRSF4P43489 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC3.76□□□□□ -1.81
TNFRSF4P43489 AP006287.2-201ENST00000529036 502 ntTSL 2 BASIC3.76□□□□□ -1.81
TNFRSF4P43489 AL133330.2-201ENST00000532760 776 ntTSL 2 BASIC3.76□□□□□ -1.81
TNFRSF4P43489 AC073912.2-201ENST00000542821 317 ntTSL 3 BASIC3.76□□□□□ -1.81
TNFRSF4P43489 LINC02468-201ENST00000543778 633 ntTSL 5 BASIC3.76□□□□□ -1.81
TNFRSF4P43489 AL121766.1-201ENST00000547436 487 ntBASIC3.76□□□□□ -1.81
TNFRSF4P43489 AC069240.1-201ENST00000548774 375 ntBASIC3.76□□□□□ -1.81
TNFRSF4P43489 AC068643.2-202ENST00000552759 622 ntTSL 3 BASIC3.76□□□□□ -1.81
TNFRSF4P43489 AC013565.1-201ENST00000565938 597 ntTSL 2 BASIC3.76□□□□□ -1.81
TNFRSF4P43489 AL032819.1-201ENST00000568554 379 ntTSL 3 BASIC3.76□□□□□ -1.81
TNFRSF4P43489 AC093227.3-202ENST00000586606 704 ntAPPRIS P5 TSL 3 BASIC3.76□□□□□ -1.81
TNFRSF4P43489 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.76□□□□□ -1.81
TNFRSF4P43489 AC011492.1-201ENST00000600023 315 ntBASIC3.76□□□□□ -1.81
TNFRSF4P43489 AC112503.1-201ENST00000608436 391 ntBASIC3.76□□□□□ -1.81
TNFRSF4P43489 AL512427.1-201ENST00000618593 349 ntBASIC3.76□□□□□ -1.81
TNFRSF4P43489 AL392088.2-201ENST00000637607 285 ntBASIC3.76□□□□□ -1.81
TNFRSF4P43489 SYNE2-204ENST00000358025 21842 ntAPPRIS P3 TSL 5 BASIC3.76□□□□□ -1.81
TNFRSF4P43489 RIMS1-206ENST00000425662 2799 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TNFRSF4P43489 LPAR6-209ENST00000620633 2175 ntAPPRIS P1 TSL 5 BASIC3.76□□□□□ -1.81
TNFRSF4P43489 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TNFRSF4P43489 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.76□□□□□ -1.81
TNFRSF4P43489 OXR1-201ENST00000297447 1944 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
TNFRSF4P43489 PNPT1P2-201ENST00000456768 2050 ntBASIC3.75□□□□□ -1.81
TNFRSF4P43489 PRO1804-201ENST00000623780 2050 ntBASIC3.75□□□□□ -1.81
TNFRSF4P43489 LINC00670-201ENST00000313495 2953 ntTSL 2 BASIC3.75□□□□□ -1.81
TNFRSF4P43489 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC3.75□□□□□ -1.81
TNFRSF4P43489 UBE4A-201ENST00000252108 6103 ntAPPRIS ALT1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TNFRSF4P43489 ZNF804A-202ENST00000613975 3986 ntTSL 5 BASIC3.75□□□□□ -1.81
TNFRSF4P43489 DDX60L-209ENST00000511577 6781 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
TNFRSF4P43489 AC021355.1-202ENST00000519996 1633 ntTSL 2 BASIC3.75□□□□□ -1.81
TNFRSF4P43489 RN7SKP44-201ENST00000363602 316 ntBASIC3.75□□□□□ -1.81
TNFRSF4P43489 RNU6-619P-201ENST00000365146 108 ntBASIC3.75□□□□□ -1.81
TNFRSF4P43489 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
TNFRSF4P43489 AL603865.2-201ENST00000401679 213 ntBASIC3.75□□□□□ -1.81
TNFRSF4P43489 Z85994.1-201ENST00000406912 606 ntTSL 2 BASIC3.75□□□□□ -1.81
TNFRSF4P43489 RN7SKP177-201ENST00000410567 355 ntBASIC3.75□□□□□ -1.81
TNFRSF4P43489 AL158013.1-202ENST00000419666 520 ntTSL 5 BASIC3.75□□□□□ -1.81
TNFRSF4P43489 SFR1P2-201ENST00000421841 730 ntBASIC3.75□□□□□ -1.81
TNFRSF4P43489 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC3.75□□□□□ -1.81
TNFRSF4P43489 RPP40P1-201ENST00000426762 456 ntBASIC3.75□□□□□ -1.81
TNFRSF4P43489 AC011242.1-201ENST00000433596 1158 ntBASIC3.75□□□□□ -1.81
TNFRSF4P43489 MAP3K13-207ENST00000438798 388 ntTSL 2 BASIC3.75□□□□□ -1.81
TNFRSF4P43489 ELOCP8-201ENST00000439309 332 ntBASIC3.75□□□□□ -1.81
TNFRSF4P43489 AL360013.2-201ENST00000440104 807 ntTSL 2 BASIC3.75□□□□□ -1.81
TNFRSF4P43489 LINC01986-201ENST00000440867 590 ntTSL 5 BASIC3.75□□□□□ -1.81
TNFRSF4P43489 AL050349.1-201ENST00000441029 401 ntTSL 2 BASIC3.75□□□□□ -1.81
TNFRSF4P43489 ELOCP15-201ENST00000442090 332 ntBASIC3.75□□□□□ -1.81
TNFRSF4P43489 CASP12-207ENST00000447913 819 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TNFRSF4P43489 Z99714.1-201ENST00000450463 807 ntBASIC3.75□□□□□ -1.81
TNFRSF4P43489 AC009158.1-205ENST00000452511 895 ntTSL 3 BASIC3.75□□□□□ -1.81
TNFRSF4P43489 IQCG-204ENST00000453254 1230 ntTSL 2 BASIC3.75□□□□□ -1.81
TNFRSF4P43489 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC3.75□□□□□ -1.81
TNFRSF4P43489 AP000926.1-201ENST00000479573 241 ntBASIC3.75□□□□□ -1.81
TNFRSF4P43489 AL358832.1-201ENST00000497800 389 ntBASIC3.75□□□□□ -1.81
TNFRSF4P43489 AC008427.1-201ENST00000503102 655 ntBASIC3.75□□□□□ -1.81
TNFRSF4P43489 AC090673.1-204ENST00000504038 977 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
TNFRSF4P43489 AC113347.4-201ENST00000506032 685 ntTSL 3 BASIC3.75□□□□□ -1.81
TNFRSF4P43489 AC108866.1-202ENST00000511064 573 ntTSL 4 BASIC3.75□□□□□ -1.81
TNFRSF4P43489 SUMO2P20-201ENST00000520803 283 ntBASIC3.75□□□□□ -1.81
TNFRSF4P43489 OR7E13P-201ENST00000526052 910 ntBASIC3.75□□□□□ -1.81
TNFRSF4P43489 AP002892.1-201ENST00000537727 550 ntTSL 4 BASIC3.75□□□□□ -1.81
TNFRSF4P43489 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.75□□□□□ -1.81
TNFRSF4P43489 AC012404.1-201ENST00000560876 476 ntTSL 3 BASIC3.75□□□□□ -1.81
TNFRSF4P43489 AGGF1P8-201ENST00000562979 1000 ntBASIC3.75□□□□□ -1.81
TNFRSF4P43489 RPAP2P1-201ENST00000603626 1168 ntBASIC3.75□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 196 ms