Protein–RNA interactions for Protein: P41273

TNFSF9, Tumor necrosis factor ligand superfamily member 9, humanhuman

Predictions only

Length 254 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9P41273 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC3.52□□□□□ -1.85
TNFSF9P41273 USP9YP7-201ENST00000436723 430 ntBASIC3.52□□□□□ -1.85
TNFSF9P41273 AC099677.4-201ENST00000446786 380 ntTSL 3 BASIC3.52□□□□□ -1.85
TNFSF9P41273 USP9YP32-201ENST00000452432 430 ntBASIC3.52□□□□□ -1.85
TNFSF9P41273 BCL2L15-204ENST00000471267 267 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TNFSF9P41273 RPS29P2-201ENST00000479278 136 ntBASIC3.52□□□□□ -1.85
TNFSF9P41273 RPL21P103-201ENST00000479921 488 ntBASIC3.52□□□□□ -1.85
TNFSF9P41273 CAPZA2-212ENST00000490693 809 ntTSL 2 BASIC3.52□□□□□ -1.85
TNFSF9P41273 OR9N1P-202ENST00000494289 481 ntBASIC3.52□□□□□ -1.85
TNFSF9P41273 NREP-AS1-201ENST00000503242 411 ntTSL 3 BASIC3.52□□□□□ -1.85
TNFSF9P41273 AC008948.1-201ENST00000506058 325 ntTSL 2 BASIC3.52□□□□□ -1.85
TNFSF9P41273 IGHV3-32-201ENST00000519182 355 ntBASIC3.52□□□□□ -1.85
TNFSF9P41273 AC022784.5-201ENST00000522241 437 ntBASIC3.52□□□□□ -1.85
TNFSF9P41273 CBX3P5-201ENST00000552017 521 ntBASIC3.52□□□□□ -1.85
TNFSF9P41273 AL158801.3-201ENST00000555514 363 ntTSL 3 BASIC3.52□□□□□ -1.85
TNFSF9P41273 AC090751.1-201ENST00000566966 267 ntBASIC3.52□□□□□ -1.85
TNFSF9P41273 AL392112.1-201ENST00000605115 829 ntBASIC3.52□□□□□ -1.85
TNFSF9P41273 MIR4458HG-202ENST00000605918 1057 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TNFSF9P41273 AC098617.1-203ENST00000609865 277 ntTSL 5 BASIC3.52□□□□□ -1.85
TNFSF9P41273 AL713922.2-201ENST00000619384 716 ntBASIC3.52□□□□□ -1.85
TNFSF9P41273 AC026422.1-201ENST00000623961 452 ntBASIC3.52□□□□□ -1.85
TNFSF9P41273 MTRNR2L10-201ENST00000545075 1530 ntAPPRIS P1 BASIC3.52□□□□□ -1.85
TNFSF9P41273 AC119744.1-201ENST00000454746 1715 ntBASIC3.52□□□□□ -1.85
TNFSF9P41273 AC025125.1-201ENST00000624743 1922 ntBASIC3.52□□□□□ -1.85
TNFSF9P41273 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.52□□□□□ -1.85
TNFSF9P41273 CHM-205ENST00000615443 2821 ntTSL 1 (best) BASIC3.52□□□□□ -1.85
TNFSF9P41273 SLC9C1-205ENST00000487372 3979 ntAPPRIS ALT2 TSL 1 (best) BASIC3.52□□□□□ -1.85
TNFSF9P41273 AL133412.1-201ENST00000380194 2992 ntBASIC3.51□□□□□ -1.85
TNFSF9P41273 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.51□□□□□ -1.85
TNFSF9P41273 DEFB129-201ENST00000246105 698 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TNFSF9P41273 XIAPP3-201ENST00000312918 795 ntBASIC3.51□□□□□ -1.85
TNFSF9P41273 MIR423-201ENST00000362201 94 ntBASIC3.51□□□□□ -1.85
TNFSF9P41273 CFHR4-203ENST00000367418 1066 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TNFSF9P41273 C9orf92-201ENST00000380683 359 ntAPPRIS P2 TSL 3 BASIC3.51□□□□□ -1.85
TNFSF9P41273 MIR3074-201ENST00000384885 81 ntBASIC3.51□□□□□ -1.85
TNFSF9P41273 MIR128-1-201ENST00000384921 82 ntBASIC3.51□□□□□ -1.85
TNFSF9P41273 MIR184-201ENST00000384962 84 ntBASIC3.51□□□□□ -1.85
TNFSF9P41273 TAF9BP1-201ENST00000396646 746 ntBASIC3.51□□□□□ -1.85
TNFSF9P41273 RHEBP3-201ENST00000411920 351 ntBASIC3.51□□□□□ -1.85
TNFSF9P41273 RPL7P53-201ENST00000421245 739 ntBASIC3.51□□□□□ -1.85
TNFSF9P41273 RPL7P29-201ENST00000437151 728 ntBASIC3.51□□□□□ -1.85
TNFSF9P41273 AC016644.1-201ENST00000438553 434 ntTSL 2 BASIC3.51□□□□□ -1.85
TNFSF9P41273 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC3.51□□□□□ -1.85
TNFSF9P41273 HMGB3P11-201ENST00000440127 604 ntBASIC3.51□□□□□ -1.85
TNFSF9P41273 LINC01923-201ENST00000443261 592 ntTSL 5 BASIC3.51□□□□□ -1.85
TNFSF9P41273 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.51□□□□□ -1.85
TNFSF9P41273 AC110794.1-201ENST00000505816 425 ntBASIC3.51□□□□□ -1.85
TNFSF9P41273 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.51□□□□□ -1.85
TNFSF9P41273 ARL2BPP6-201ENST00000512757 439 ntBASIC3.51□□□□□ -1.85
TNFSF9P41273 Vault.1-201ENST00000516474 102 ntBASIC3.51□□□□□ -1.85
TNFSF9P41273 SNORA31.13-201ENST00000516624 135 ntBASIC3.51□□□□□ -1.85
TNFSF9P41273 AP001636.3-202ENST00000525714 894 ntTSL 3 BASIC3.51□□□□□ -1.85
TNFSF9P41273 AL356215.1-201ENST00000528366 1102 ntTSL 2 BASIC3.51□□□□□ -1.85
TNFSF9P41273 FBXO3-AS1-202ENST00000533046 386 ntTSL 3 BASIC3.51□□□□□ -1.85
TNFSF9P41273 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC3.51□□□□□ -1.85
TNFSF9P41273 AC011602.1-201ENST00000546484 331 ntBASIC3.51□□□□□ -1.85
TNFSF9P41273 AC117505.1-202ENST00000547027 566 ntTSL 3 BASIC3.51□□□□□ -1.85
TNFSF9P41273 CBX3P2-202ENST00000583365 535 ntBASIC3.51□□□□□ -1.85
TNFSF9P41273 AC005242.1-201ENST00000585658 438 ntBASIC3.51□□□□□ -1.85
TNFSF9P41273 AC097467.3-207ENST00000602249 725 ntTSL 5 BASIC3.51□□□□□ -1.85
TNFSF9P41273 IGKV1OR2-6-201ENST00000603485 277 ntBASIC3.51□□□□□ -1.85
TNFSF9P41273 AC105429.2-201ENST00000610567 517 ntBASIC3.51□□□□□ -1.85
TNFSF9P41273 AL157817.1-201ENST00000614264 790 ntBASIC3.51□□□□□ -1.85
TNFSF9P41273 GPR34-203ENST00000620846 1282 ntTSL 1 (best) BASIC3.51□□□□□ -1.85
TNFSF9P41273 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC3.51□□□□□ -1.85
TNFSF9P41273 AL928596.1-201ENST00000636738 632 ntTSL 2 BASIC3.51□□□□□ -1.85
TNFSF9P41273 AC058791.1-201ENST00000608412 3198 ntBASIC3.51□□□□□ -1.85
TNFSF9P41273 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TNFSF9P41273 AL049737.1-201ENST00000413920 1403 ntBASIC3.51□□□□□ -1.85
TNFSF9P41273 MKLN1-201ENST00000352689 11156 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TNFSF9P41273 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.51□□□□□ -1.85
TNFSF9P41273 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC3.51□□□□□ -1.85
TNFSF9P41273 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC3.51□□□□□ -1.85
TNFSF9P41273 AF117829.1-206ENST00000621883 3802 ntBASIC3.5□□□□□ -1.85
TNFSF9P41273 AC025164.2-202ENST00000499685 5699 ntTSL 3 BASIC3.5□□□□□ -1.85
TNFSF9P41273 NUDCD1-202ENST00000427660 2098 ntTSL 1 (best) BASIC3.5□□□□□ -1.85
TNFSF9P41273 USP9Y-201ENST00000338981 10036 ntAPPRIS P1 TSL 1 (best) BASIC3.5□□□□□ -1.85
TNFSF9P41273 ZNF833P-201ENST00000424938 1494 ntBASIC3.5□□□□□ -1.85
TNFSF9P41273 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC3.5□□□□□ -1.85
TNFSF9P41273 U3.19-201ENST00000390893 196 ntBASIC3.5□□□□□ -1.85
TNFSF9P41273 IQCA1-AS1-201ENST00000413353 489 ntTSL 3 BASIC3.5□□□□□ -1.85
TNFSF9P41273 OR4K6P-201ENST00000416478 897 ntBASIC3.5□□□□□ -1.85
TNFSF9P41273 HSFY1P1-201ENST00000423928 1178 ntBASIC3.5□□□□□ -1.85
TNFSF9P41273 AC007271.1-201ENST00000428188 382 ntTSL 3 BASIC3.5□□□□□ -1.85
TNFSF9P41273 AFF2-IT1-201ENST00000435346 443 ntTSL 5 BASIC3.5□□□□□ -1.85
TNFSF9P41273 Z83839.2-201ENST00000436294 274 ntTSL 5 BASIC3.5□□□□□ -1.85
TNFSF9P41273 CST9LP2-201ENST00000437612 320 ntBASIC3.5□□□□□ -1.85
TNFSF9P41273 PPIAP17-201ENST00000438507 471 ntBASIC3.5□□□□□ -1.85
TNFSF9P41273 LINC01941-201ENST00000455174 624 ntTSL 2 BASIC3.5□□□□□ -1.85
TNFSF9P41273 RNU6-775P-201ENST00000459318 96 ntBASIC3.5□□□□□ -1.85
TNFSF9P41273 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.5□□□□□ -1.85
TNFSF9P41273 RN7SKP234-201ENST00000517173 224 ntBASIC3.5□□□□□ -1.85
TNFSF9P41273 AC083923.2-202ENST00000517773 498 ntTSL 3 BASIC3.5□□□□□ -1.85
TNFSF9P41273 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC3.5□□□□□ -1.85
TNFSF9P41273 AC100871.2-201ENST00000522005 327 ntTSL 3 BASIC3.5□□□□□ -1.85
TNFSF9P41273 AL139174.1-201ENST00000531489 886 ntBASIC3.5□□□□□ -1.85
TNFSF9P41273 AC084838.1-201ENST00000532973 312 ntTSL 3 BASIC3.5□□□□□ -1.85
TNFSF9P41273 AL139021.2-201ENST00000556390 399 ntTSL 3 BASIC3.5□□□□□ -1.85
TNFSF9P41273 AC023034.1-202ENST00000558153 684 ntTSL 3 BASIC3.5□□□□□ -1.85
TNFSF9P41273 AC007673.1-201ENST00000590604 1100 ntTSL 5 BASIC3.5□□□□□ -1.85
Retrieved 100 of 98,524 protein–RNA pairs in 112.1 ms