Protein–RNA interactions for Protein: P39059

COL15A1, Collagen alpha-1(XV) chain, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1P39059 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL15A1P39059 RAD51AP1-201ENST00000228843 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL15A1P39059 MARK2P15-201ENST00000432204 2186 ntBASIC5.02□□□□□ -1.61
COL15A1P39059 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL15A1P39059 RNU4-44P-201ENST00000363050 141 ntBASIC5.02□□□□□ -1.61
COL15A1P39059 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC5.02□□□□□ -1.61
COL15A1P39059 TMSB4XP8-201ENST00000402089 135 ntBASIC5.02□□□□□ -1.61
COL15A1P39059 AL512430.2-201ENST00000406786 339 ntBASIC5.02□□□□□ -1.61
COL15A1P39059 MTND4P22-201ENST00000413116 1169 ntBASIC5.02□□□□□ -1.61
COL15A1P39059 TMSB4XP6-201ENST00000415187 135 ntBASIC5.02□□□□□ -1.61
COL15A1P39059 ZNF736P2Y-201ENST00000416040 1279 ntBASIC5.02□□□□□ -1.61
COL15A1P39059 TMSB4XP1-201ENST00000424567 135 ntBASIC5.02□□□□□ -1.61
COL15A1P39059 AC234781.2-201ENST00000426370 994 ntBASIC5.02□□□□□ -1.61
COL15A1P39059 AC093581.1-202ENST00000430890 391 ntTSL 2 BASIC5.02□□□□□ -1.61
COL15A1P39059 PPIAP17-201ENST00000438507 471 ntBASIC5.02□□□□□ -1.61
COL15A1P39059 USP9YP22-201ENST00000438971 294 ntBASIC5.02□□□□□ -1.61
COL15A1P39059 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC5.02□□□□□ -1.61
COL15A1P39059 GACAT1-202ENST00000441383 540 ntTSL 4 BASIC5.02□□□□□ -1.61
COL15A1P39059 RPL23AP76-201ENST00000441860 458 ntBASIC5.02□□□□□ -1.61
COL15A1P39059 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC5.02□□□□□ -1.61
COL15A1P39059 PDSS1P2-201ENST00000449397 678 ntBASIC5.02□□□□□ -1.61
COL15A1P39059 AC099566.1-212ENST00000451675 799 ntTSL 3 BASIC5.02□□□□□ -1.61
COL15A1P39059 AL445488.1-201ENST00000457272 706 ntTSL 5 BASIC5.02□□□□□ -1.61
COL15A1P39059 GUCA1C-203ENST00000471108 633 ntTSL 2 BASIC5.02□□□□□ -1.61
COL15A1P39059 AC108734.3-201ENST00000481241 1165 ntBASIC5.02□□□□□ -1.61
COL15A1P39059 AC093752.1-212ENST00000500559 453 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL15A1P39059 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC5.02□□□□□ -1.61
COL15A1P39059 RPF2P2-201ENST00000504693 896 ntBASIC5.02□□□□□ -1.61
COL15A1P39059 AC116353.3-201ENST00000511215 249 ntBASIC5.02□□□□□ -1.61
COL15A1P39059 AC026780.1-201ENST00000512237 952 ntTSL 3 BASIC5.02□□□□□ -1.61
COL15A1P39059 RNU6-1129P-201ENST00000515964 104 ntBASIC5.02□□□□□ -1.61
COL15A1P39059 AP003472.1-201ENST00000519844 644 ntTSL 3 BASIC5.02□□□□□ -1.61
COL15A1P39059 AL354920.1-202ENST00000531661 1017 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
COL15A1P39059 AL035078.2-201ENST00000533832 326 ntTSL 3 BASIC5.02□□□□□ -1.61
COL15A1P39059 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC5.02□□□□□ -1.61
COL15A1P39059 ELOCP32-201ENST00000548625 324 ntBASIC5.02□□□□□ -1.61
COL15A1P39059 CASC16-202ENST00000563844 610 ntTSL 3 BASIC5.02□□□□□ -1.61
COL15A1P39059 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC5.02□□□□□ -1.61
COL15A1P39059 DPRXP4-201ENST00000578053 568 ntBASIC5.02□□□□□ -1.61
COL15A1P39059 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC5.02□□□□□ -1.61
COL15A1P39059 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC5.02□□□□□ -1.61
COL15A1P39059 BNIP3P26-201ENST00000600827 554 ntBASIC5.02□□□□□ -1.61
COL15A1P39059 AC010620.1-201ENST00000601088 1102 ntBASIC5.02□□□□□ -1.61
COL15A1P39059 PSMA6P4-201ENST00000603247 718 ntBASIC5.02□□□□□ -1.61
COL15A1P39059 AC069545.1-201ENST00000605671 358 ntBASIC5.02□□□□□ -1.61
COL15A1P39059 AC080013.6-201ENST00000606185 215 ntBASIC5.02□□□□□ -1.61
COL15A1P39059 AC064807.4-201ENST00000607201 407 ntBASIC5.02□□□□□ -1.61
COL15A1P39059 PLCE1-AS2-211ENST00000613585 542 ntTSL 5 BASIC5.02□□□□□ -1.61
COL15A1P39059 AC009318.3-201ENST00000616916 503 ntBASIC5.02□□□□□ -1.61
COL15A1P39059 AL354821.1-201ENST00000617598 809 ntTSL 3 BASIC5.02□□□□□ -1.61
COL15A1P39059 AC018926.3-201ENST00000618841 406 ntBASIC5.02□□□□□ -1.61
COL15A1P39059 AC067852.7-201ENST00000623270 535 ntBASIC5.02□□□□□ -1.61
COL15A1P39059 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC5.02□□□□□ -1.61
COL15A1P39059 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC5.02□□□□□ -1.61
COL15A1P39059 MNDA-201ENST00000368141 1752 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
COL15A1P39059 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COL15A1P39059 BTBD10P1-201ENST00000549824 1352 ntBASIC5.01□□□□□ -1.61
COL15A1P39059 AC025263.3-201ENST00000622965 1396 ntBASIC5.01□□□□□ -1.61
COL15A1P39059 AC097504.1-201ENST00000515103 2415 ntBASIC5.01□□□□□ -1.61
COL15A1P39059 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC5.01□□□□□ -1.61
COL15A1P39059 PIGN-240ENST00000639912 6530 ntTSL 5 BASIC5.01□□□□□ -1.61
COL15A1P39059 Z99496.1-201ENST00000469424 1477 ntBASIC5.01□□□□□ -1.61
COL15A1P39059 CNTN5-212ENST00000619298 5734 ntTSL 5 BASIC5.01□□□□□ -1.61
COL15A1P39059 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC5.01□□□□□ -1.61
COL15A1P39059 RNU6-157P-201ENST00000383957 107 ntBASIC5.01□□□□□ -1.61
COL15A1P39059 FAM230B-202ENST00000415704 396 ntTSL 3 BASIC5.01□□□□□ -1.61
COL15A1P39059 AC002454.1-204ENST00000419668 527 ntTSL 3 BASIC5.01□□□□□ -1.61
COL15A1P39059 MTND4P20-201ENST00000424125 869 ntBASIC5.01□□□□□ -1.61
COL15A1P39059 F10-AS1-201ENST00000424635 417 ntTSL 5 BASIC5.01□□□□□ -1.61
COL15A1P39059 AC073069.1-201ENST00000428657 441 ntBASIC5.01□□□□□ -1.61
COL15A1P39059 USP9YP31-201ENST00000431405 881 ntBASIC5.01□□□□□ -1.61
COL15A1P39059 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC5.01□□□□□ -1.61
COL15A1P39059 UBE2D3P1-201ENST00000436669 444 ntBASIC5.01□□□□□ -1.61
COL15A1P39059 GSAP-208ENST00000441833 737 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COL15A1P39059 AF127577.5-201ENST00000449746 446 ntTSL 3 BASIC5.01□□□□□ -1.61
COL15A1P39059 AC104781.1-201ENST00000449838 397 ntTSL 3 BASIC5.01□□□□□ -1.61
COL15A1P39059 VPS26AP1-201ENST00000483197 979 ntBASIC5.01□□□□□ -1.61
COL15A1P39059 AC025554.1-201ENST00000505641 188 ntBASIC5.01□□□□□ -1.61
COL15A1P39059 RN7SKP283-201ENST00000517197 270 ntBASIC5.01□□□□□ -1.61
COL15A1P39059 PTK2-220ENST00000520151 573 ntTSL 4 BASIC5.01□□□□□ -1.61
COL15A1P39059 AC108863.1-201ENST00000520863 650 ntTSL 3 BASIC5.01□□□□□ -1.61
COL15A1P39059 AC026904.2-201ENST00000521359 537 ntTSL 3 BASIC5.01□□□□□ -1.61
COL15A1P39059 AP003730.2-201ENST00000526385 546 ntTSL 3 BASIC5.01□□□□□ -1.61
COL15A1P39059 AC135279.1-201ENST00000543493 504 ntBASIC5.01□□□□□ -1.61
COL15A1P39059 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC5.01□□□□□ -1.61
COL15A1P39059 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC5.01□□□□□ -1.61
COL15A1P39059 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC5.01□□□□□ -1.61
COL15A1P39059 KLHL23-207ENST00000602521 630 ntTSL 3 BASIC5.01□□□□□ -1.61
COL15A1P39059 HSPE1-MOB4-201ENST00000604458 890 ntAPPRIS P1 TSL 3 BASIC5.01□□□□□ -1.61
COL15A1P39059 AL158042.1-201ENST00000605338 460 ntBASIC5.01□□□□□ -1.61
COL15A1P39059 AL451064.1-201ENST00000607718 471 ntBASIC5.01□□□□□ -1.61
COL15A1P39059 CD44-239ENST00000639002 528 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COL15A1P39059 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
COL15A1P39059 STK33-208ENST00000447869 3103 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
COL15A1P39059 BMPR2-201ENST00000374574 9683 ntTSL 2 BASIC5□□□□□ -1.61
COL15A1P39059 GAS2L3-202ENST00000537247 2742 ntTSL 2 BASIC5□□□□□ -1.61
COL15A1P39059 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
COL15A1P39059 CLUL1-208ENST00000581619 2449 ntTSL 2 BASIC5□□□□□ -1.61
COL15A1P39059 AP002001.2-201ENST00000529025 1469 ntBASIC5□□□□□ -1.61
COL15A1P39059 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 103.3 ms