Protein–RNA interactions for Protein: P31275

HOXC12, Homeobox protein Hox-C12, humanhuman

Predictions only

Length 282 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC12P31275 AC124854.1-202ENST00000513779 339 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXC12P31275 BX510359.5-201ENST00000515651 304 ntBASIC5.12□□□□□ -1.59
HOXC12P31275 RNU6-941P-201ENST00000516346 108 ntBASIC5.12□□□□□ -1.59
HOXC12P31275 AP003072.2-201ENST00000527756 676 ntBASIC5.12□□□□□ -1.59
HOXC12P31275 BRD9P1-201ENST00000529855 560 ntBASIC5.12□□□□□ -1.59
HOXC12P31275 AC073530.1-201ENST00000535917 775 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXC12P31275 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXC12P31275 HMGB1P6-201ENST00000569046 646 ntBASIC5.12□□□□□ -1.59
HOXC12P31275 AC010761.5-201ENST00000579468 287 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXC12P31275 AC015917.1-201ENST00000579654 510 ntBASIC5.12□□□□□ -1.59
HOXC12P31275 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXC12P31275 AL589935.1-223ENST00000587015 808 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXC12P31275 YWHAQP7-201ENST00000603536 658 ntBASIC5.12□□□□□ -1.59
HOXC12P31275 AC007566.2-201ENST00000603642 413 ntBASIC5.12□□□□□ -1.59
HOXC12P31275 LINC02104-202ENST00000604954 599 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXC12P31275 AC113194.1-201ENST00000606037 500 ntBASIC5.12□□□□□ -1.59
HOXC12P31275 AL008729.2-201ENST00000606393 473 ntBASIC5.12□□□□□ -1.59
HOXC12P31275 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXC12P31275 AP000904.1-201ENST00000609911 951 ntTSL 3 BASIC5.12□□□□□ -1.59
HOXC12P31275 DISC2.1-201ENST00000612827 205 ntBASIC5.12□□□□□ -1.59
HOXC12P31275 RDM1-226ENST00000619828 687 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HOXC12P31275 AC022106.2-201ENST00000620114 757 ntBASIC5.12□□□□□ -1.59
HOXC12P31275 AL136221.1-201ENST00000621449 509 ntBASIC5.12□□□□□ -1.59
HOXC12P31275 LINC01787-201ENST00000435311 1994 ntTSL 2 BASIC5.12□□□□□ -1.59
HOXC12P31275 Z95331.1-201ENST00000623075 23112 ntBASIC5.12□□□□□ -1.59
HOXC12P31275 AC109780.1-201ENST00000451768 1344 ntBASIC5.12□□□□□ -1.59
HOXC12P31275 PCAT14-202ENST00000627127 3935 ntBASIC5.12□□□□□ -1.59
HOXC12P31275 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXC12P31275 GALNT11-203ENST00000422997 2371 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXC12P31275 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC5.12□□□□□ -1.59
HOXC12P31275 OTOGL-204ENST00000547103 8032 ntAPPRIS ALT2 TSL 5 BASIC5.12□□□□□ -1.59
HOXC12P31275 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.12□□□□□ -1.59
HOXC12P31275 C9orf153-204ENST00000613665 1738 ntAPPRIS P2 TSL 2 BASIC5.11□□□□□ -1.59
HOXC12P31275 OR56A4-202ENST00000641156 3768 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
HOXC12P31275 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXC12P31275 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXC12P31275 MPHOSPH9-211ENST00000541076 6136 ntAPPRIS ALT2 TSL 5 BASIC5.11□□□□□ -1.59
HOXC12P31275 LINC01630-202ENST00000578152 3188 ntTSL 2 BASIC5.11□□□□□ -1.59
HOXC12P31275 CASC11-201ENST00000502463 3301 ntTSL 2 BASIC5.11□□□□□ -1.59
HOXC12P31275 AC104260.2-201ENST00000623551 3497 ntBASIC5.11□□□□□ -1.59
HOXC12P31275 MCMDC2-204ENST00000422365 5096 ntAPPRIS P1 TSL 2 BASIC5.11□□□□□ -1.59
HOXC12P31275 Y_RNA.72-201ENST00000362894 103 ntBASIC5.11□□□□□ -1.59
HOXC12P31275 Y_RNA.142-201ENST00000363491 102 ntBASIC5.11□□□□□ -1.59
HOXC12P31275 AL390198.1-201ENST00000376445 320 ntTSL 2 BASIC5.11□□□□□ -1.59
HOXC12P31275 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXC12P31275 RNA5SP251-201ENST00000410614 137 ntBASIC5.11□□□□□ -1.59
HOXC12P31275 RNU6-1068P-201ENST00000410958 103 ntBASIC5.11□□□□□ -1.59
HOXC12P31275 RWDD4P2-201ENST00000426392 563 ntBASIC5.11□□□□□ -1.59
HOXC12P31275 RBMY2QP-201ENST00000429799 1147 ntBASIC5.11□□□□□ -1.59
HOXC12P31275 TIMM9P1-201ENST00000436122 256 ntBASIC5.11□□□□□ -1.59
HOXC12P31275 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXC12P31275 PTMAP6-201ENST00000439110 327 ntBASIC5.11□□□□□ -1.59
HOXC12P31275 AL450996.1-201ENST00000445574 1202 ntBASIC5.11□□□□□ -1.59
HOXC12P31275 AC093166.4-201ENST00000457867 318 ntBASIC5.11□□□□□ -1.59
HOXC12P31275 AL133445.1-201ENST00000467051 452 ntBASIC5.11□□□□□ -1.59
HOXC12P31275 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC5.11□□□□□ -1.59
HOXC12P31275 RN7SL591P-201ENST00000496150 292 ntBASIC5.11□□□□□ -1.59
HOXC12P31275 GLRX-206ENST00000508780 533 ntAPPRIS P1 TSL 4 BASIC5.11□□□□□ -1.59
HOXC12P31275 AC021146.1-201ENST00000511202 716 ntBASIC5.11□□□□□ -1.59
HOXC12P31275 AC100784.1-201ENST00000522790 310 ntBASIC5.11□□□□□ -1.59
HOXC12P31275 AC105031.3-201ENST00000524359 616 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXC12P31275 AC091564.3-201ENST00000527398 429 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXC12P31275 AC007368.1-201ENST00000536422 974 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXC12P31275 AC010175.1-201ENST00000538219 224 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXC12P31275 ARL2BPP2-201ENST00000550907 489 ntBASIC5.11□□□□□ -1.59
HOXC12P31275 AL160191.1-202ENST00000554008 576 ntTSL 4 BASIC5.11□□□□□ -1.59
HOXC12P31275 IGBP1P1-201ENST00000554337 1009 ntBASIC5.11□□□□□ -1.59
HOXC12P31275 OR4T1P-201ENST00000554933 911 ntBASIC5.11□□□□□ -1.59
HOXC12P31275 AL138976.2-201ENST00000563989 694 ntBASIC5.11□□□□□ -1.59
HOXC12P31275 AC055876.1-202ENST00000567053 138 ntBASIC5.11□□□□□ -1.59
HOXC12P31275 PINLYP-205ENST00000569031 557 ntTSL 2 BASIC5.11□□□□□ -1.59
HOXC12P31275 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC5.11□□□□□ -1.59
HOXC12P31275 AC004542.2-201ENST00000602847 546 ntTSL 3 BASIC5.11□□□□□ -1.59
HOXC12P31275 AC004853.1-201ENST00000604902 698 ntBASIC5.11□□□□□ -1.59
HOXC12P31275 SLC38A2-214ENST00000612232 1221 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXC12P31275 AC090607.5-201ENST00000615692 224 ntBASIC5.11□□□□□ -1.59
HOXC12P31275 AL391425.1-202ENST00000617518 774 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXC12P31275 AL354950.2-201ENST00000617939 290 ntBASIC5.11□□□□□ -1.59
HOXC12P31275 AC138649.5-201ENST00000637456 137 ntBASIC5.11□□□□□ -1.59
HOXC12P31275 AC112487.2-201ENST00000637950 304 ntBASIC5.11□□□□□ -1.59
HOXC12P31275 C6orf163-202ENST00000388923 1308 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
HOXC12P31275 AC235565.1-201ENST00000456962 1325 ntBASIC5.11□□□□□ -1.59
HOXC12P31275 AP4S1-212ENST00000622409 4113 ntAPPRIS P1 TSL 3 BASIC5.11□□□□□ -1.59
HOXC12P31275 WDR63-202ENST00000326813 2888 ntAPPRIS ALT2 TSL 2 BASIC5.11□□□□□ -1.59
HOXC12P31275 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC5.11□□□□□ -1.59
HOXC12P31275 ZNF271P-205ENST00000639248 4573 ntTSL 5 BASIC5.11□□□□□ -1.59
HOXC12P31275 MTND5P17-201ENST00000418405 1603 ntBASIC5.11□□□□□ -1.59
HOXC12P31275 LINC02203-203ENST00000625989 1600 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXC12P31275 LINC01111-201ENST00000518732 1663 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXC12P31275 CLUL1-205ENST00000579494 1742 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
HOXC12P31275 ABI3BP-215ENST00000495063 3714 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXC12P31275 RXFP1-203ENST00000343542 2130 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
HOXC12P31275 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC12P31275 LINC02261-201ENST00000512873 2802 ntTSL 2 BASIC5.1□□□□□ -1.59
HOXC12P31275 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC5.1□□□□□ -1.59
HOXC12P31275 C17orf105-201ENST00000449302 3753 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC12P31275 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC12P31275 PTPRO-210ENST00000544244 3978 ntAPPRIS ALT2 TSL 2 BASIC5.1□□□□□ -1.59
HOXC12P31275 RFFL-202ENST00000394597 4227 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
HOXC12P31275 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms