Protein–RNA interactions for Protein: P28827

PTPRM, Receptor-type tyrosine-protein phosphatase mu, humanhuman

Predictions only

Length 1,452 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRMP28827 WASF3-AS1-206ENST00000626779 381 ntTSL 5 BASIC4.34□□□□□ -1.71
PTPRMP28827 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.34□□□□□ -1.72
PTPRMP28827 TFEC-203ENST00000393485 2704 ntTSL 2 BASIC4.34□□□□□ -1.72
PTPRMP28827 RAPGEF6-202ENST00000308008 4176 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PTPRMP28827 LINC00301-201ENST00000320202 852 ntTSL 2 BASIC4.33□□□□□ -1.72
PTPRMP28827 AC004057.1-202ENST00000356247 284 ntTSL 3 BASIC4.33□□□□□ -1.72
PTPRMP28827 AC006150.1-201ENST00000412014 263 ntTSL 5 BASIC4.33□□□□□ -1.72
PTPRMP28827 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC4.33□□□□□ -1.72
PTPRMP28827 CST9LP2-201ENST00000437612 320 ntBASIC4.33□□□□□ -1.72
PTPRMP28827 AC024084.1-201ENST00000440744 455 ntTSL 5 BASIC4.33□□□□□ -1.72
PTPRMP28827 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC4.33□□□□□ -1.72
PTPRMP28827 AC126121.2-201ENST00000486137 698 ntTSL 3 BASIC4.33□□□□□ -1.72
PTPRMP28827 AC018690.1-201ENST00000608144 626 ntBASIC4.33□□□□□ -1.72
PTPRMP28827 AC080128.1-201ENST00000474389 1917 ntBASIC4.33□□□□□ -1.72
PTPRMP28827 KYNU-202ENST00000375773 1772 ntTSL 1 (best) BASIC4.33□□□□□ -1.72
PTPRMP28827 UGT8-202ENST00000394511 2448 ntAPPRIS P1 TSL 1 (best) BASIC4.33□□□□□ -1.72
PTPRMP28827 AL445528.1-201ENST00000426330 420 ntBASIC4.32□□□□□ -1.72
PTPRMP28827 RNU1-143P-201ENST00000516296 146 ntBASIC4.32□□□□□ -1.72
PTPRMP28827 LINC02170-201ENST00000561519 555 ntTSL 4 BASIC4.32□□□□□ -1.72
PTPRMP28827 AC009977.1-201ENST00000586015 570 ntBASIC4.32□□□□□ -1.72
PTPRMP28827 U1.23-201ENST00000610293 146 ntBASIC4.32□□□□□ -1.72
PTPRMP28827 RNU1-68P-201ENST00000615382 146 ntBASIC4.32□□□□□ -1.72
PTPRMP28827 SMAD5-AS1_1.1-201ENST00000619886 266 ntBASIC4.32□□□□□ -1.72
PTPRMP28827 U1.39-201ENST00000621562 146 ntBASIC4.32□□□□□ -1.72
PTPRMP28827 AC017002.4-201ENST00000604721 1525 ntBASIC4.32□□□□□ -1.72
PTPRMP28827 ARPP19-211ENST00000568196 1489 ntTSL 2 BASIC4.32□□□□□ -1.72
PTPRMP28827 CHD9-213ENST00000564845 11504 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTPRMP28827 LINC01505-206ENST00000637046 4266 ntTSL 5 BASIC4.32□□□□□ -1.72
PTPRMP28827 ACADM-203ENST00000420607 1332 ntAPPRIS ALT1 TSL 1 (best) BASIC4.32□□□□□ -1.72
PTPRMP28827 RPS4XP5-202ENST00000449995 1334 ntBASIC4.32□□□□□ -1.72
PTPRMP28827 AL356489.2-201ENST00000566968 3528 ntBASIC4.31□□□□□ -1.72
PTPRMP28827 RNF111-212ENST00000561186 4536 ntTSL 2 BASIC4.31□□□□□ -1.72
PTPRMP28827 APCS-201ENST00000255040 926 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTPRMP28827 Y_RNA.164-201ENST00000363709 102 ntBASIC4.31□□□□□ -1.72
PTPRMP28827 MIR512-1-201ENST00000384913 84 ntBASIC4.31□□□□□ -1.72
PTPRMP28827 RNA5SP31-201ENST00000411144 127 ntBASIC4.31□□□□□ -1.72
PTPRMP28827 AC009963.1-201ENST00000417265 157 ntBASIC4.31□□□□□ -1.72
PTPRMP28827 RPS12P18-201ENST00000442381 270 ntBASIC4.31□□□□□ -1.72
PTPRMP28827 AC025181.1-201ENST00000477507 416 ntBASIC4.31□□□□□ -1.72
PTPRMP28827 ARL2BPP6-201ENST00000512757 439 ntBASIC4.31□□□□□ -1.72
PTPRMP28827 AC024132.3-201ENST00000513616 649 ntTSL 5 BASIC4.31□□□□□ -1.72
PTPRMP28827 OR5G4P-201ENST00000525251 760 ntBASIC4.31□□□□□ -1.72
PTPRMP28827 AC023394.1-201ENST00000578673 312 ntTSL 5 BASIC4.31□□□□□ -1.72
PTPRMP28827 AP005062.1-201ENST00000581502 607 ntTSL 3 BASIC4.31□□□□□ -1.72
PTPRMP28827 AL365400.2-201ENST00000605604 902 ntBASIC4.31□□□□□ -1.72
PTPRMP28827 AC006840.1-201ENST00000623069 542 ntBASIC4.31□□□□□ -1.72
PTPRMP28827 EFR3A-202ENST00000519656 5247 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PTPRMP28827 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
PTPRMP28827 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
PTPRMP28827 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC4.31□□□□□ -1.72
PTPRMP28827 ADGRL3-215ENST00000512091 12636 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
PTPRMP28827 TRAV39-201ENST00000390466 331 ntAPPRIS P1 BASIC4.3□□□□□ -1.72
PTPRMP28827 RPS4XP7-201ENST00000406274 780 ntBASIC4.3□□□□□ -1.72
PTPRMP28827 RNU6-55P-201ENST00000411092 107 ntBASIC4.3□□□□□ -1.72
PTPRMP28827 RNU6-954P-201ENST00000411355 107 ntBASIC4.3□□□□□ -1.72
PTPRMP28827 OR51A3P-201ENST00000413596 924 ntBASIC4.3□□□□□ -1.72
PTPRMP28827 AC025465.2-201ENST00000502809 608 ntTSL 2 BASIC4.3□□□□□ -1.72
PTPRMP28827 AC006445.2-201ENST00000510061 472 ntBASIC4.3□□□□□ -1.72
PTPRMP28827 RNA5SP148-201ENST00000516527 94 ntBASIC4.3□□□□□ -1.72
PTPRMP28827 AL590385.2-201ENST00000537821 553 ntTSL 5 BASIC4.3□□□□□ -1.72
PTPRMP28827 AC117377.1-201ENST00000547633 1038 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
PTPRMP28827 AC027176.1-201ENST00000560204 514 ntBASIC4.3□□□□□ -1.72
PTPRMP28827 AC008894.1-201ENST00000587693 367 ntTSL 5 BASIC4.3□□□□□ -1.72
PTPRMP28827 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.3□□□□□ -1.72
PTPRMP28827 AC008725.1-201ENST00000605123 2263 ntBASIC4.3□□□□□ -1.72
PTPRMP28827 TOP2A-201ENST00000423485 5758 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTPRMP28827 SLC38A11-204ENST00000409662 1542 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
PTPRMP28827 PCDH15-218ENST00000437009 6804 ntTSL 5 BASIC4.3□□□□□ -1.72
PTPRMP28827 Y_RNA.40-201ENST00000362645 93 ntBASIC4.3□□□□□ -1.72
PTPRMP28827 RNU6-618P-201ENST00000363518 112 ntBASIC4.3□□□□□ -1.72
PTPRMP28827 RNU6ATAC37P-201ENST00000408328 131 ntBASIC4.3□□□□□ -1.72
PTPRMP28827 HMGN2P3-201ENST00000433603 273 ntBASIC4.3□□□□□ -1.72
PTPRMP28827 B3GNT2P1-201ENST00000434960 952 ntBASIC4.3□□□□□ -1.72
PTPRMP28827 HMGN2P5-201ENST00000436882 273 ntBASIC4.3□□□□□ -1.72
PTPRMP28827 AC010975.1-201ENST00000443301 669 ntTSL 3 BASIC4.3□□□□□ -1.72
PTPRMP28827 AP001783.1-202ENST00000534620 408 ntTSL 2 BASIC4.3□□□□□ -1.72
PTPRMP28827 AC010185.1-201ENST00000542489 456 ntTSL 3 BASIC4.3□□□□□ -1.72
PTPRMP28827 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.3□□□□□ -1.72
PTPRMP28827 AP001120.2-201ENST00000589395 296 ntTSL 3 BASIC4.3□□□□□ -1.72
PTPRMP28827 AC016727.1-205ENST00000605437 569 ntBASIC4.3□□□□□ -1.72
PTPRMP28827 FAT3-204ENST00000525166 18699 ntTSL 5 BASIC4.3□□□□□ -1.72
PTPRMP28827 DCAF13P3-201ENST00000561147 1334 ntBASIC4.29□□□□□ -1.72
PTPRMP28827 GLRXP1-201ENST00000423261 334 ntBASIC4.29□□□□□ -1.72
PTPRMP28827 AL049610.1-201ENST00000423374 372 ntBASIC4.29□□□□□ -1.72
PTPRMP28827 MTCO1P51-201ENST00000427672 1060 ntBASIC4.29□□□□□ -1.72
PTPRMP28827 HMGB3P11-201ENST00000440127 604 ntBASIC4.29□□□□□ -1.72
PTPRMP28827 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC4.29□□□□□ -1.72
PTPRMP28827 AC104126.1-201ENST00000504004 711 ntTSL 3 BASIC4.29□□□□□ -1.72
PTPRMP28827 AC112184.1-201ENST00000505179 312 ntBASIC4.29□□□□□ -1.72
PTPRMP28827 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC4.29□□□□□ -1.72
PTPRMP28827 AC008946.1-201ENST00000599756 421 ntTSL 3 BASIC4.29□□□□□ -1.72
PTPRMP28827 AC015871.2-201ENST00000603605 948 ntBASIC4.29□□□□□ -1.72
PTPRMP28827 PLCE1P1-201ENST00000622094 305 ntBASIC4.29□□□□□ -1.72
PTPRMP28827 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC4.28□□□□□ -1.72
PTPRMP28827 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPRMP28827 BCLAF3-202ENST00000379682 3217 ntAPPRIS ALT2 TSL 5 BASIC4.28□□□□□ -1.72
PTPRMP28827 APOH-201ENST00000205948 1176 ntAPPRIS P1 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPRMP28827 SNORA9.2-201ENST00000365361 133 ntBASIC4.28□□□□□ -1.72
PTPRMP28827 DSCR8-202ENST00000400477 534 ntAPPRIS ALT2 TSL 1 (best) BASIC4.28□□□□□ -1.72
PTPRMP28827 CYCSP45-201ENST00000402289 315 ntBASIC4.28□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 134.4 ms