Protein–RNA interactions for Protein: P25942

CD40, Tumor necrosis factor receptor superfamily member 5, humanhuman

Predictions only

Length 277 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD40P25942 CTXN2-201ENST00000417307 2828 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CD40P25942 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC4.7□□□□□ -1.66
CD40P25942 THAP12P4-201ENST00000528321 2266 ntBASIC4.7□□□□□ -1.66
CD40P25942 C1orf27-201ENST00000287859 3792 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CD40P25942 SEC31A-204ENST00000355196 4104 ntAPPRIS P4 TSL 2 BASIC4.7□□□□□ -1.66
CD40P25942 MTM1-203ENST00000370396 3593 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CD40P25942 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CD40P25942 EPHA4-202ENST00000409854 3454 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CD40P25942 OR1S2-201ENST00000302592 978 ntBASIC4.7□□□□□ -1.66
CD40P25942 RNU6-108P-201ENST00000365558 107 ntBASIC4.7□□□□□ -1.66
CD40P25942 FAM107B-204ENST00000378465 1052 ntAPPRIS P1 TSL 2 BASIC4.7□□□□□ -1.66
CD40P25942 SNORA67-201ENST00000384423 137 ntBASIC4.7□□□□□ -1.66
CD40P25942 SNORA70E-201ENST00000384492 135 ntBASIC4.7□□□□□ -1.66
CD40P25942 RNU6-821P-201ENST00000390995 107 ntBASIC4.7□□□□□ -1.66
CD40P25942 AC104462.1-201ENST00000414565 447 ntTSL 2 BASIC4.7□□□□□ -1.66
CD40P25942 AL807761.1-201ENST00000417622 171 ntBASIC4.7□□□□□ -1.66
CD40P25942 ZNF90P2-204ENST00000419323 1075 ntBASIC4.7□□□□□ -1.66
CD40P25942 CHIAP3-201ENST00000423668 1133 ntBASIC4.7□□□□□ -1.66
CD40P25942 ZNF863P-201ENST00000426746 417 ntBASIC4.7□□□□□ -1.66
CD40P25942 BRWD1P3-201ENST00000428816 390 ntBASIC4.7□□□□□ -1.66
CD40P25942 LINC01850-201ENST00000429916 357 ntTSL 3 BASIC4.7□□□□□ -1.66
CD40P25942 LINC01797-202ENST00000433432 765 ntTSL 3 BASIC4.7□□□□□ -1.66
CD40P25942 RPS15AP9-201ENST00000439856 381 ntBASIC4.7□□□□□ -1.66
CD40P25942 AC093156.1-201ENST00000440382 670 ntBASIC4.7□□□□□ -1.66
CD40P25942 AC099566.1-201ENST00000442558 479 ntTSL 3 BASIC4.7□□□□□ -1.66
CD40P25942 ST13P14-201ENST00000474095 734 ntBASIC4.7□□□□□ -1.66
CD40P25942 LINC00492-201ENST00000504436 593 ntTSL 3 BASIC4.7□□□□□ -1.66
CD40P25942 AC105343.1-201ENST00000505586 358 ntTSL 3 BASIC4.7□□□□□ -1.66
CD40P25942 AC016559.2-201ENST00000510759 359 ntBASIC4.7□□□□□ -1.66
CD40P25942 FTH1P21-201ENST00000512179 511 ntBASIC4.7□□□□□ -1.66
CD40P25942 AC025465.4-201ENST00000513422 638 ntBASIC4.7□□□□□ -1.66
CD40P25942 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC4.7□□□□□ -1.66
CD40P25942 IGHVIII-76-1-201ENST00000523776 286 ntBASIC4.7□□□□□ -1.66
CD40P25942 AC008149.1-201ENST00000551844 525 ntTSL 4 BASIC4.7□□□□□ -1.66
CD40P25942 SETP7-201ENST00000552169 453 ntBASIC4.7□□□□□ -1.66
CD40P25942 AC034105.3-201ENST00000565294 442 ntBASIC4.7□□□□□ -1.66
CD40P25942 AC005341.1-201ENST00000571086 708 ntBASIC4.7□□□□□ -1.66
CD40P25942 SLC14A2-AS1-201ENST00000585759 494 ntTSL 3 BASIC4.7□□□□□ -1.66
CD40P25942 AL157938.2-203ENST00000589540 931 ntTSL 5 BASIC4.7□□□□□ -1.66
CD40P25942 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC4.7□□□□□ -1.66
CD40P25942 AC245517.5-201ENST00000611529 162 ntBASIC4.7□□□□□ -1.66
CD40P25942 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC4.7□□□□□ -1.66
CD40P25942 AC006065.6-201ENST00000625201 545 ntBASIC4.7□□□□□ -1.66
CD40P25942 CCT5-215ENST00000625723 135 ntTSL 5 BASIC4.7□□□□□ -1.66
CD40P25942 AC010976.1-210ENST00000630740 1005 ntTSL 5 BASIC4.7□□□□□ -1.66
CD40P25942 SAMMSON-227ENST00000642114 1199 ntBASIC4.7□□□□□ -1.66
CD40P25942 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CD40P25942 AK9-204ENST00000424296 6326 ntAPPRIS P1 TSL 5 BASIC4.7□□□□□ -1.66
CD40P25942 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC4.7□□□□□ -1.66
CD40P25942 DOCK4-AS1-201ENST00000452714 2494 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CD40P25942 WDR17-204ENST00000507824 4119 ntTSL 5 BASIC4.7□□□□□ -1.66
CD40P25942 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC4.7□□□□□ -1.66
CD40P25942 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CD40P25942 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.7□□□□□ -1.66
CD40P25942 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CD40P25942 LRP1B-201ENST00000389484 16535 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CD40P25942 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CD40P25942 SYNCRIP-204ENST00000616122 6764 ntTSL 1 (best) BASIC4.7□□□□□ -1.66
CD40P25942 NPFFR2-203ENST00000358749 1559 ntAPPRIS P1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CD40P25942 PPHLN1-208ENST00000449194 1583 ntAPPRIS ALT1 TSL 1 (best) BASIC4.7□□□□□ -1.66
CD40P25942 CAPRIN2-203ENST00000417045 3535 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CD40P25942 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CD40P25942 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CD40P25942 AC083843.2-201ENST00000568248 6253 ntBASIC4.69□□□□□ -1.66
CD40P25942 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CD40P25942 RNF19A-205ENST00000519449 4330 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CD40P25942 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC4.69□□□□□ -1.66
CD40P25942 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC4.69□□□□□ -1.66
CD40P25942 ATF2-202ENST00000345739 4079 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CD40P25942 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CD40P25942 OR2M2-201ENST00000359682 1044 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CD40P25942 RNU6-1120P-201ENST00000362988 108 ntBASIC4.69□□□□□ -1.66
CD40P25942 RNU6-1097P-201ENST00000363586 107 ntBASIC4.69□□□□□ -1.66
CD40P25942 MEIG1-201ENST00000378240 507 ntAPPRIS P1 TSL 2 BASIC4.69□□□□□ -1.66
CD40P25942 TRAJ25-201ENST00000390512 60 ntAPPRIS P1 BASIC4.69□□□□□ -1.66
CD40P25942 RNA5SP487-201ENST00000410186 122 ntBASIC4.69□□□□□ -1.66
CD40P25942 UQCRBP1-201ENST00000421129 336 ntBASIC4.69□□□□□ -1.66
CD40P25942 AL391219.1-201ENST00000422570 483 ntBASIC4.69□□□□□ -1.66
CD40P25942 RGS17P1-201ENST00000423358 553 ntBASIC4.69□□□□□ -1.66
CD40P25942 AL139148.1-201ENST00000427122 680 ntBASIC4.69□□□□□ -1.66
CD40P25942 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC4.69□□□□□ -1.66
CD40P25942 ST7-AS2-203ENST00000434993 918 ntTSL 1 (best) BASIC4.69□□□□□ -1.66
CD40P25942 OR52B5P-201ENST00000435337 951 ntBASIC4.69□□□□□ -1.66
CD40P25942 AC007327.2-201ENST00000440788 457 ntTSL 3 BASIC4.69□□□□□ -1.66
CD40P25942 BNIP3P2-201ENST00000441221 577 ntBASIC4.69□□□□□ -1.66
CD40P25942 RPL21P89-201ENST00000444021 467 ntBASIC4.69□□□□□ -1.66
CD40P25942 GAPDHP25-201ENST00000447061 1001 ntBASIC4.69□□□□□ -1.66
CD40P25942 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC4.69□□□□□ -1.66
CD40P25942 TPT1P13-201ENST00000449760 499 ntBASIC4.69□□□□□ -1.66
CD40P25942 AL591623.2-201ENST00000449978 222 ntBASIC4.69□□□□□ -1.66
CD40P25942 NANOGP10-201ENST00000453325 895 ntBASIC4.69□□□□□ -1.66
CD40P25942 AC108059.3-201ENST00000456388 214 ntBASIC4.69□□□□□ -1.66
CD40P25942 UBDP1-202ENST00000457888 382 ntBASIC4.69□□□□□ -1.66
CD40P25942 RPS29P25-201ENST00000481709 171 ntBASIC4.69□□□□□ -1.66
CD40P25942 CR383656.1-201ENST00000484916 377 ntBASIC4.69□□□□□ -1.66
CD40P25942 RPL36AP51-201ENST00000487216 318 ntBASIC4.69□□□□□ -1.66
CD40P25942 AC072052.1-201ENST00000496556 306 ntBASIC4.69□□□□□ -1.66
CD40P25942 ENSA-211ENST00000503345 793 ntTSL 3 BASIC4.69□□□□□ -1.66
CD40P25942 AC114781.4-201ENST00000513707 639 ntBASIC4.69□□□□□ -1.66
CD40P25942 RNU6-507P-201ENST00000516045 100 ntBASIC4.69□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 83.2 ms