Protein–RNA interactions for Protein: P18887

XRCC1, DNA repair protein XRCC1, humanhuman

Predicted RBP Predictions only

Length 633 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC1P18887 AC105429.2-201ENST00000610567 517 ntBASIC3.63□□□□□ -1.83
XRCC1P18887 AL391261.4-201ENST00000616012 481 ntBASIC3.63□□□□□ -1.83
XRCC1P18887 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC3.63□□□□□ -1.83
XRCC1P18887 AL034408.1-202ENST00000636088 415 ntBASIC3.63□□□□□ -1.83
XRCC1P18887 MFN1-201ENST00000263969 2754 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
XRCC1P18887 FOXP2-224ENST00000635534 4290 ntTSL 5 BASIC3.63□□□□□ -1.83
XRCC1P18887 DOCK7-202ENST00000340370 6731 ntAPPRIS P3 TSL 2 BASIC3.63□□□□□ -1.83
XRCC1P18887 YWHAZ-201ENST00000353245 2829 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
XRCC1P18887 WDR72-201ENST00000360509 5887 ntAPPRIS P2 TSL 1 (best) BASIC3.63□□□□□ -1.83
XRCC1P18887 ERMN-205ENST00000410096 3793 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
XRCC1P18887 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC3.63□□□□□ -1.83
XRCC1P18887 CNGB3-201ENST00000320005 4347 ntAPPRIS P1 TSL 1 (best) BASIC3.63□□□□□ -1.83
XRCC1P18887 OR6C2-202ENST00000641202 2105 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
XRCC1P18887 ZNF266-204ENST00000590306 3317 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
XRCC1P18887 DTHD1-202ENST00000456874 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
XRCC1P18887 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.62□□□□□ -1.83
XRCC1P18887 PRRG1-202ENST00000449135 4481 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
XRCC1P18887 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
XRCC1P18887 SULT1E1-201ENST00000226444 1780 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
XRCC1P18887 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC3.62□□□□□ -1.83
XRCC1P18887 OR51A7-201ENST00000359350 1048 ntAPPRIS P1 BASIC3.62□□□□□ -1.83
XRCC1P18887 MIR670-201ENST00000390142 98 ntBASIC3.62□□□□□ -1.83
XRCC1P18887 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC3.62□□□□□ -1.83
XRCC1P18887 AC092832.1-201ENST00000422934 400 ntBASIC3.62□□□□□ -1.83
XRCC1P18887 SLC16A12-AS1-201ENST00000423474 405 ntTSL 3 BASIC3.62□□□□□ -1.83
XRCC1P18887 ELOCP6-201ENST00000429066 328 ntBASIC3.62□□□□□ -1.83
XRCC1P18887 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC3.62□□□□□ -1.83
XRCC1P18887 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC3.62□□□□□ -1.83
XRCC1P18887 RPS3AP46-201ENST00000448352 682 ntBASIC3.62□□□□□ -1.83
XRCC1P18887 AL353148.1-203ENST00000452286 665 ntTSL 3 BASIC3.62□□□□□ -1.83
XRCC1P18887 ELOCP12-201ENST00000458706 328 ntBASIC3.62□□□□□ -1.83
XRCC1P18887 CEP70-205ENST00000464035 1054 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
XRCC1P18887 AL365356.5-201ENST00000478294 697 ntTSL 2 BASIC3.62□□□□□ -1.83
XRCC1P18887 RPL21P103-201ENST00000479921 488 ntBASIC3.62□□□□□ -1.83
XRCC1P18887 AC106707.2-201ENST00000484182 374 ntBASIC3.62□□□□□ -1.83
XRCC1P18887 AP001086.1-201ENST00000494882 321 ntBASIC3.62□□□□□ -1.83
XRCC1P18887 TRAV31-201ENST00000502780 342 ntBASIC3.62□□□□□ -1.83
XRCC1P18887 HMGN1P15-201ENST00000513870 295 ntBASIC3.62□□□□□ -1.83
XRCC1P18887 RNU6-488P-201ENST00000515918 99 ntBASIC3.62□□□□□ -1.83
XRCC1P18887 IGKV2OR2-8-201ENST00000558710 300 ntBASIC3.62□□□□□ -1.83
XRCC1P18887 AL353708.2-201ENST00000567486 447 ntTSL 3 BASIC3.62□□□□□ -1.83
XRCC1P18887 AP001180.3-201ENST00000582221 145 ntBASIC3.62□□□□□ -1.83
XRCC1P18887 RN7SL622P-201ENST00000585292 275 ntBASIC3.62□□□□□ -1.83
XRCC1P18887 LINC00649-204ENST00000593977 640 ntTSL 5 BASIC3.62□□□□□ -1.83
XRCC1P18887 AC100781.1-203ENST00000598549 399 ntTSL 5 BASIC3.62□□□□□ -1.83
XRCC1P18887 BNIP3P33-201ENST00000598912 569 ntBASIC3.62□□□□□ -1.83
XRCC1P18887 AP001972.3-202ENST00000603012 375 ntTSL 3 BASIC3.62□□□□□ -1.83
XRCC1P18887 AL365503.1-201ENST00000605247 905 ntBASIC3.62□□□□□ -1.83
XRCC1P18887 RPS4Y2-201ENST00000629237 792 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
XRCC1P18887 FAM157B-203ENST00000639350 358 ntBASIC3.62□□□□□ -1.83
XRCC1P18887 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.62□□□□□ -1.83
XRCC1P18887 TET2-204ENST00000413648 4973 ntTSL 1 (best) BASIC3.62□□□□□ -1.83
XRCC1P18887 C5orf42-205ENST00000508244 11062 ntAPPRIS P2 TSL 5 BASIC3.62□□□□□ -1.83
XRCC1P18887 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC3.62□□□□□ -1.83
XRCC1P18887 CYP3A7-201ENST00000336374 1971 ntAPPRIS P1 TSL 1 (best) BASIC3.62□□□□□ -1.83
XRCC1P18887 AC009975.2-201ENST00000635306 1429 ntTSL 5 BASIC3.61□□□□□ -1.83
XRCC1P18887 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.61□□□□□ -1.83
XRCC1P18887 FNBP1L-206ENST00000604705 1830 ntAPPRIS ALT1 TSL 5 BASIC3.61□□□□□ -1.83
XRCC1P18887 5S_rRNA.1-201ENST00000364415 116 ntBASIC3.61□□□□□ -1.83
XRCC1P18887 RNA5SP51-201ENST00000364750 119 ntBASIC3.61□□□□□ -1.83
XRCC1P18887 CNIH4-201ENST00000366856 808 ntAPPRIS ALT1 TSL 2 BASIC3.61□□□□□ -1.83
XRCC1P18887 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.61□□□□□ -1.83
XRCC1P18887 RNA5SP171-201ENST00000391071 115 ntBASIC3.61□□□□□ -1.83
XRCC1P18887 SOD2P1-201ENST00000396543 562 ntBASIC3.61□□□□□ -1.83
XRCC1P18887 RPL7P60-201ENST00000397636 735 ntBASIC3.61□□□□□ -1.83
XRCC1P18887 SPINK13-201ENST00000398450 509 ntAPPRIS P2 TSL 1 (best) BASIC3.61□□□□□ -1.83
XRCC1P18887 RNU2-21P-201ENST00000410368 188 ntBASIC3.61□□□□□ -1.83
XRCC1P18887 LINC01709-201ENST00000415532 634 ntTSL 5 BASIC3.61□□□□□ -1.83
XRCC1P18887 RPL31P45-201ENST00000419532 356 ntBASIC3.61□□□□□ -1.83
XRCC1P18887 AL360091.1-201ENST00000447949 496 ntTSL 5 BASIC3.61□□□□□ -1.83
XRCC1P18887 AL589963.1-201ENST00000449282 727 ntTSL 3 BASIC3.61□□□□□ -1.83
XRCC1P18887 RPL23AP15-201ENST00000450202 459 ntBASIC3.61□□□□□ -1.83
XRCC1P18887 AC012355.1-201ENST00000450290 769 ntTSL 3 BASIC3.61□□□□□ -1.83
XRCC1P18887 TPTE2P6-203ENST00000450973 649 ntTSL 5 BASIC3.61□□□□□ -1.83
XRCC1P18887 SUN3-208ENST00000453192 801 ntTSL 5 BASIC3.61□□□□□ -1.83
XRCC1P18887 CDC42P1-201ENST00000456658 548 ntBASIC3.61□□□□□ -1.83
XRCC1P18887 AC004884.2-201ENST00000476569 546 ntTSL 4 BASIC3.61□□□□□ -1.83
XRCC1P18887 AC020651.1-201ENST00000490324 360 ntTSL 3 BASIC3.61□□□□□ -1.83
XRCC1P18887 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.61□□□□□ -1.83
XRCC1P18887 SAR1B-204ENST00000502539 708 ntTSL 5 BASIC3.61□□□□□ -1.83
XRCC1P18887 PDLIM1P4-201ENST00000504327 1006 ntBASIC3.61□□□□□ -1.83
XRCC1P18887 AC006499.5-201ENST00000505037 514 ntBASIC3.61□□□□□ -1.83
XRCC1P18887 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.61□□□□□ -1.83
XRCC1P18887 AC016550.2-202ENST00000511940 581 ntTSL 2 BASIC3.61□□□□□ -1.83
XRCC1P18887 AC016553.1-201ENST00000513283 249 ntTSL 3 BASIC3.61□□□□□ -1.83
XRCC1P18887 AC093772.1-201ENST00000513519 506 ntTSL 2 BASIC3.61□□□□□ -1.83
XRCC1P18887 RN7SKP18-201ENST00000516005 275 ntBASIC3.61□□□□□ -1.83
XRCC1P18887 RN7SKP157-201ENST00000516174 282 ntBASIC3.61□□□□□ -1.83
XRCC1P18887 SOD1P3-201ENST00000518682 454 ntBASIC3.61□□□□□ -1.83
XRCC1P18887 NDUFB9P3-201ENST00000521269 501 ntBASIC3.61□□□□□ -1.83
XRCC1P18887 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC3.61□□□□□ -1.83
XRCC1P18887 LINC02267-202ENST00000522173 799 ntTSL 3 BASIC3.61□□□□□ -1.83
XRCC1P18887 AC009558.2-201ENST00000558258 396 ntTSL 2 BASIC3.61□□□□□ -1.83
XRCC1P18887 AC009137.1-201ENST00000562790 260 ntTSL 3 BASIC3.61□□□□□ -1.83
XRCC1P18887 AC074050.1-201ENST00000563247 211 ntBASIC3.61□□□□□ -1.83
XRCC1P18887 MIR4425-201ENST00000580572 84 ntBASIC3.61□□□□□ -1.83
XRCC1P18887 AC009704.1-201ENST00000583702 331 ntTSL 5 BASIC3.61□□□□□ -1.83
XRCC1P18887 AC017100.2-201ENST00000584628 355 ntBASIC3.61□□□□□ -1.83
XRCC1P18887 AC024603.1-201ENST00000597938 592 ntTSL 4 BASIC3.61□□□□□ -1.83
XRCC1P18887 AL163642.2-201ENST00000604722 1019 ntBASIC3.61□□□□□ -1.83
Retrieved 100 of 98,524 protein–RNA pairs in 76.5 ms