Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 FKTN-209ENST00000602661 2576 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
CTLA4P16410 ELL2P4-201ENST00000446870 1376 ntBASIC2.87□□□□□ -1.95
CTLA4P16410 KIF15-203ENST00000425755 3460 ntTSL 5 BASIC2.87□□□□□ -1.95
CTLA4P16410 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CTLA4P16410 RTKN2-201ENST00000315289 2383 ntTSL 2 BASIC2.87□□□□□ -1.95
CTLA4P16410 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CTLA4P16410 RNU6-805P-201ENST00000365643 106 ntBASIC2.87□□□□□ -1.95
CTLA4P16410 SEC61A2-203ENST00000379017 600 ntTSL 5 BASIC2.87□□□□□ -1.95
CTLA4P16410 RNU6-452P-201ENST00000384406 107 ntBASIC2.87□□□□□ -1.95
CTLA4P16410 RNA5SP293-201ENST00000410527 113 ntBASIC2.87□□□□□ -1.95
CTLA4P16410 AC007390.1-201ENST00000415722 356 ntBASIC2.87□□□□□ -1.95
CTLA4P16410 AC244453.4-201ENST00000419150 388 ntBASIC2.87□□□□□ -1.95
CTLA4P16410 AP003025.1-201ENST00000421650 149 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CTLA4P16410 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC2.87□□□□□ -1.95
CTLA4P16410 LINC01078-201ENST00000434832 387 ntTSL 5 BASIC2.87□□□□□ -1.95
CTLA4P16410 AL929236.1-201ENST00000443622 518 ntTSL 3 BASIC2.87□□□□□ -1.95
CTLA4P16410 RPL34P26-201ENST00000445636 354 ntBASIC2.87□□□□□ -1.95
CTLA4P16410 AC125238.1-201ENST00000448842 249 ntBASIC2.87□□□□□ -1.95
CTLA4P16410 PDSS1P2-201ENST00000449397 678 ntBASIC2.87□□□□□ -1.95
CTLA4P16410 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC2.87□□□□□ -1.95
CTLA4P16410 AL080313.2-201ENST00000456440 489 ntTSL 3 BASIC2.87□□□□□ -1.95
CTLA4P16410 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC2.87□□□□□ -1.95
CTLA4P16410 AC008155.2-201ENST00000464337 397 ntBASIC2.87□□□□□ -1.95
CTLA4P16410 AL049830.2-201ENST00000480072 201 ntBASIC2.87□□□□□ -1.95
CTLA4P16410 ACTR3BP4-201ENST00000503033 1244 ntBASIC2.87□□□□□ -1.95
CTLA4P16410 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC2.87□□□□□ -1.95
CTLA4P16410 SNORA67.7-201ENST00000516664 135 ntBASIC2.87□□□□□ -1.95
CTLA4P16410 RN7SKP289-201ENST00000517244 295 ntBASIC2.87□□□□□ -1.95
CTLA4P16410 AC023202.1-201ENST00000521681 491 ntTSL 3 BASIC2.87□□□□□ -1.95
CTLA4P16410 AP000857.2-201ENST00000532123 419 ntTSL 3 BASIC2.87□□□□□ -1.95
CTLA4P16410 AC006518.1-201ENST00000541449 943 ntBASIC2.87□□□□□ -1.95
CTLA4P16410 AC087463.4-202ENST00000566676 579 ntTSL 3 BASIC2.87□□□□□ -1.95
CTLA4P16410 AC006133.1-201ENST00000617106 264 ntBASIC2.87□□□□□ -1.95
CTLA4P16410 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC2.87□□□□□ -1.95
CTLA4P16410 CGA-204ENST00000627148 1010 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CTLA4P16410 LINC02246-205ENST00000627623 417 ntTSL 5 BASIC2.87□□□□□ -1.95
CTLA4P16410 CASC15-208ENST00000636388 1174 ntTSL 5 BASIC2.87□□□□□ -1.95
CTLA4P16410 AC007218.2-201ENST00000636913 179 ntTSL 5 BASIC2.87□□□□□ -1.95
CTLA4P16410 Z83843.1-201ENST00000604070 3685 ntBASIC2.87□□□□□ -1.95
CTLA4P16410 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC2.87□□□□□ -1.95
CTLA4P16410 USP15-203ENST00000353364 14950 ntAPPRIS P3 TSL 1 (best) BASIC2.87□□□□□ -1.95
CTLA4P16410 VNN1-201ENST00000367928 3106 ntAPPRIS P1 TSL 1 (best) BASIC2.87□□□□□ -1.95
CTLA4P16410 MTND4P31-201ENST00000425607 1343 ntBASIC2.87□□□□□ -1.95
CTLA4P16410 AC022031.1-201ENST00000585985 2593 ntBASIC2.87□□□□□ -1.95
CTLA4P16410 LINC00907-209ENST00000593234 3376 ntTSL 1 (best) BASIC2.86□□□□□ -1.95
CTLA4P16410 ELAVL2-204ENST00000397312 3805 ntAPPRIS P3 TSL 1 (best) BASIC2.86□□□□□ -1.95
CTLA4P16410 DOPEY1-203ENST00000369739 7743 ntAPPRIS ALT1 TSL 1 (best) BASIC2.86□□□□□ -1.95
CTLA4P16410 GABRG2-208ENST00000638552 3710 ntTSL 5 BASIC2.86□□□□□ -1.95
CTLA4P16410 SYCP2-201ENST00000357552 5567 ntAPPRIS P2 TSL 1 (best) BASIC2.86□□□□□ -1.95
CTLA4P16410 RNU1-33P-201ENST00000364249 162 ntBASIC2.86□□□□□ -1.95
CTLA4P16410 U3.11-201ENST00000364476 212 ntBASIC2.86□□□□□ -1.95
CTLA4P16410 AC234772.1-201ENST00000377927 937 ntBASIC2.86□□□□□ -1.95
CTLA4P16410 RNU2-65P-201ENST00000410162 185 ntBASIC2.86□□□□□ -1.95
CTLA4P16410 AL022329.2-201ENST00000413494 660 ntTSL 5 BASIC2.86□□□□□ -1.95
CTLA4P16410 AC234782.4-201ENST00000417646 1048 ntBASIC2.86□□□□□ -1.95
CTLA4P16410 OR1AA1P-201ENST00000419597 916 ntBASIC2.86□□□□□ -1.95
CTLA4P16410 AC241520.1-201ENST00000422654 1099 ntBASIC2.86□□□□□ -1.95
CTLA4P16410 LINC02526-201ENST00000424162 419 ntTSL 2 BASIC2.86□□□□□ -1.95
CTLA4P16410 Z95327.1-201ENST00000446082 482 ntBASIC2.86□□□□□ -1.95
CTLA4P16410 SNORA84-201ENST00000459229 133 ntBASIC2.86□□□□□ -1.95
CTLA4P16410 RPL31P13-201ENST00000484151 370 ntBASIC2.86□□□□□ -1.95
CTLA4P16410 AC108043.1-201ENST00000512696 574 ntBASIC2.86□□□□□ -1.95
CTLA4P16410 AC093755.1-201ENST00000512950 1023 ntBASIC2.86□□□□□ -1.95
CTLA4P16410 RNA5SP217-201ENST00000515959 91 ntBASIC2.86□□□□□ -1.95
CTLA4P16410 RN7SKP157-201ENST00000516174 282 ntBASIC2.86□□□□□ -1.95
CTLA4P16410 OR6C73P-201ENST00000546432 358 ntBASIC2.86□□□□□ -1.95
CTLA4P16410 AC063947.1-201ENST00000549036 557 ntTSL 4 BASIC2.86□□□□□ -1.95
CTLA4P16410 HIGD1AP1-201ENST00000550979 275 ntBASIC2.86□□□□□ -1.95
CTLA4P16410 AL121594.4-201ENST00000556211 1196 ntBASIC2.86□□□□□ -1.95
CTLA4P16410 RPL21P12-201ENST00000559810 515 ntBASIC2.86□□□□□ -1.95
CTLA4P16410 ZRANB2-AS2-213ENST00000591654 719 ntTSL 5 BASIC2.86□□□□□ -1.95
CTLA4P16410 PPP3CB-AS1-206ENST00000595935 675 ntTSL 5 BASIC2.86□□□□□ -1.95
CTLA4P16410 AC073657.2-201ENST00000605661 303 ntBASIC2.86□□□□□ -1.95
CTLA4P16410 AL162591.3-201ENST00000607963 681 ntTSL 3 BASIC2.86□□□□□ -1.95
CTLA4P16410 AC009032.1-201ENST00000617574 431 ntBASIC2.86□□□□□ -1.95
CTLA4P16410 MAGI2-AS3-224ENST00000619135 205 ntTSL 5 BASIC2.86□□□□□ -1.95
CTLA4P16410 XIST_intron.1-201ENST00000619444 68 ntBASIC2.86□□□□□ -1.95
CTLA4P16410 AF117829.1-206ENST00000621883 3802 ntBASIC2.86□□□□□ -1.95
CTLA4P16410 LINC00216-201ENST00000623548 1126 ntBASIC2.86□□□□□ -1.95
CTLA4P16410 ZRANB2-AS2-221ENST00000624050 629 ntTSL 5 BASIC2.86□□□□□ -1.95
CTLA4P16410 OR8B2-202ENST00000641451 1056 ntAPPRIS P1 BASIC2.86□□□□□ -1.95
CTLA4P16410 EVI2A-202ENST00000461237 1540 ntAPPRIS ALT2 TSL 4 BASIC2.86□□□□□ -1.95
CTLA4P16410 LRRC49-222ENST00000560158 1898 ntTSL 5 BASIC2.86□□□□□ -1.95
CTLA4P16410 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC2.85□□□□□ -1.95
CTLA4P16410 NBEAL1-203ENST00000449802 10938 ntAPPRIS P1 TSL 5 BASIC2.85□□□□□ -1.95
CTLA4P16410 MTCO1P8-201ENST00000416914 1523 ntBASIC2.85□□□□□ -1.95
CTLA4P16410 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CTLA4P16410 GLIPR1L1-201ENST00000312442 1132 ntAPPRIS P3 TSL 1 (best) BASIC2.85□□□□□ -1.95
CTLA4P16410 PKIB-202ENST00000354275 1043 ntAPPRIS P1 TSL 1 (best) BASIC2.85□□□□□ -1.95
CTLA4P16410 AKAP14-202ENST00000371422 412 ntAPPRIS ALT2 TSL 1 (best) BASIC2.85□□□□□ -1.95
CTLA4P16410 AL034376.1-201ENST00000380106 484 ntTSL 2 BASIC2.85□□□□□ -1.95
CTLA4P16410 DNAJC19P6-201ENST00000401853 280 ntBASIC2.85□□□□□ -1.95
CTLA4P16410 RNU2-21P-201ENST00000410368 188 ntBASIC2.85□□□□□ -1.95
CTLA4P16410 ZNF92P1Y-201ENST00000415010 1191 ntBASIC2.85□□□□□ -1.95
CTLA4P16410 AC063979.1-201ENST00000415539 377 ntBASIC2.85□□□□□ -1.95
CTLA4P16410 ARF4P2-201ENST00000430209 526 ntBASIC2.85□□□□□ -1.95
CTLA4P16410 AP000855.1-201ENST00000433210 636 ntTSL 2 BASIC2.85□□□□□ -1.95
CTLA4P16410 AL583835.2-201ENST00000435483 500 ntTSL 2 BASIC2.85□□□□□ -1.95
CTLA4P16410 AC005019.1-201ENST00000436455 431 ntBASIC2.85□□□□□ -1.95
CTLA4P16410 RPL23AP33-201ENST00000442301 452 ntBASIC2.85□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 145.8 ms