Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 AC073359.1-201ENST00000486545 521 ntTSL 2 BASIC2.91□□□□□ -1.94
VCANP13611 CSN1S1-202ENST00000505782 871 ntAPPRIS ALT2 TSL 5 BASIC2.91□□□□□ -1.94
VCANP13611 RPL7P20-201ENST00000520308 745 ntBASIC2.91□□□□□ -1.94
VCANP13611 AP000790.1-201ENST00000528891 737 ntBASIC2.91□□□□□ -1.94
VCANP13611 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC2.91□□□□□ -1.94
VCANP13611 UBE2E2-207ENST00000628311 267 ntTSL 5 BASIC2.91□□□□□ -1.94
VCANP13611 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
VCANP13611 AC027514.1-201ENST00000588561 1603 ntBASIC2.91□□□□□ -1.94
VCANP13611 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC2.91□□□□□ -1.94
VCANP13611 STAG2-204ENST00000371157 5991 ntAPPRIS P3 TSL 1 (best) BASIC2.91□□□□□ -1.94
VCANP13611 ERBB4-203ENST00000402597 11699 ntTSL 1 (best) BASIC2.91□□□□□ -1.94
VCANP13611 PTP4A1P5-201ENST00000420305 455 ntBASIC2.91□□□□□ -1.94
VCANP13611 AC090952.1-201ENST00000424242 446 ntTSL 3 BASIC2.91□□□□□ -1.94
VCANP13611 NIPA2P5-201ENST00000452282 464 ntBASIC2.91□□□□□ -1.94
VCANP13611 TRBV1-201ENST00000476502 284 ntBASIC2.91□□□□□ -1.94
VCANP13611 AC015917.1-201ENST00000579654 510 ntBASIC2.91□□□□□ -1.94
VCANP13611 TP73-AS1.1-201ENST00000611447 161 ntBASIC2.91□□□□□ -1.94
VCANP13611 AC000403.1-201ENST00000613696 3585 ntBASIC2.9□□□□□ -1.94
VCANP13611 SELENOI-201ENST00000260585 8101 ntAPPRIS P2 TSL 1 (best) BASIC2.9□□□□□ -1.94
VCANP13611 KIAA0586-203ENST00000423743 5339 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
VCANP13611 LINC02516-201ENST00000563724 1771 ntTSL 2 BASIC2.9□□□□□ -1.94
VCANP13611 ETV1-208ENST00000420159 6231 ntTSL 2 BASIC2.9□□□□□ -1.94
VCANP13611 OR12D2-207ENST00000642051 1496 ntAPPRIS P1 BASIC2.9□□□□□ -1.94
VCANP13611 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.94
VCANP13611 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC2.9□□□□□ -1.94
VCANP13611 UTS2-202ENST00000361696 559 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
VCANP13611 RN7SKP44-201ENST00000363602 316 ntBASIC2.9□□□□□ -1.94
VCANP13611 DUTP6-201ENST00000425573 462 ntBASIC2.9□□□□□ -1.94
VCANP13611 AC009107.1-201ENST00000561923 330 ntTSL 3 BASIC2.9□□□□□ -1.94
VCANP13611 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC2.9□□□□□ -1.94
VCANP13611 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC2.9□□□□□ -1.94
VCANP13611 LINC01533-205ENST00000593056 607 ntTSL 3 BASIC2.9□□□□□ -1.94
VCANP13611 LRFN5-204ENST00000554171 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC2.9□□□□□ -1.94
VCANP13611 SLCO1A2-201ENST00000307378 7682 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
VCANP13611 ARID2-202ENST00000422737 5481 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
VCANP13611 BBX-206ENST00000415149 8930 ntAPPRIS P3 TSL 1 (best) BASIC2.9□□□□□ -1.95
VCANP13611 RICTOR-201ENST00000296782 7505 ntTSL 1 (best) BASIC2.9□□□□□ -1.95
VCANP13611 HMGB3P18-201ENST00000406327 590 ntBASIC2.9□□□□□ -1.95
VCANP13611 RPL7P10-201ENST00000417407 739 ntBASIC2.9□□□□□ -1.95
VCANP13611 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC2.9□□□□□ -1.95
VCANP13611 AP003102.1-201ENST00000525638 661 ntBASIC2.9□□□□□ -1.95
VCANP13611 UBTFL10-201ENST00000528532 562 ntBASIC2.9□□□□□ -1.95
VCANP13611 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC2.9□□□□□ -1.95
VCANP13611 AC009948.4-201ENST00000604692 675 ntBASIC2.9□□□□□ -1.95
VCANP13611 AC091564.4-201ENST00000533934 2194 ntBASIC2.9□□□□□ -1.95
VCANP13611 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
VCANP13611 NOC3L-201ENST00000371361 3455 ntAPPRIS P1 TSL 1 (best) BASIC2.9□□□□□ -1.95
VCANP13611 RANBP6-201ENST00000259569 4576 ntAPPRIS P1 BASIC2.9□□□□□ -1.95
VCANP13611 BMPR1B-203ENST00000440890 5388 ntTSL 2 BASIC2.89□□□□□ -1.95
VCANP13611 SNORD74.4-201ENST00000364129 80 ntBASIC2.89□□□□□ -1.95
VCANP13611 C1orf185-201ENST00000371759 915 ntAPPRIS P2 TSL 2 BASIC2.89□□□□□ -1.95
VCANP13611 AC110754.1-201ENST00000399740 601 ntBASIC2.89□□□□□ -1.95
VCANP13611 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC2.89□□□□□ -1.95
VCANP13611 RPS26P3-201ENST00000470205 348 ntBASIC2.89□□□□□ -1.95
VCANP13611 SCOC-205ENST00000502535 679 ntAPPRIS ALT1 TSL 3 BASIC2.89□□□□□ -1.95
VCANP13611 AP001636.2-201ENST00000525517 696 ntBASIC2.89□□□□□ -1.95
VCANP13611 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC2.89□□□□□ -1.95
VCANP13611 AC093524.1-201ENST00000564266 1094 ntBASIC2.89□□□□□ -1.95
VCANP13611 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC2.89□□□□□ -1.95
VCANP13611 NRBF2P1-201ENST00000587407 859 ntBASIC2.89□□□□□ -1.95
VCANP13611 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
VCANP13611 CACNB4-229ENST00000636617 5757 ntTSL 5 BASIC2.89□□□□□ -1.95
VCANP13611 SENP7-207ENST00000394095 4945 ntAPPRIS P3 TSL 1 (best) BASIC2.89□□□□□ -1.95
VCANP13611 FANCD2-202ENST00000383807 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC2.89□□□□□ -1.95
VCANP13611 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC2.89□□□□□ -1.95
VCANP13611 SLC24A2-202ENST00000341998 10749 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
VCANP13611 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.89□□□□□ -1.95
VCANP13611 OR10A6-204ENST00000642108 6104 ntAPPRIS P1 BASIC2.89□□□□□ -1.95
VCANP13611 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC2.89□□□□□ -1.95
VCANP13611 RNA5SP325-201ENST00000363756 130 ntBASIC2.89□□□□□ -1.95
VCANP13611 AL590084.1-201ENST00000407885 387 ntBASIC2.89□□□□□ -1.95
VCANP13611 TCP1P3-201ENST00000414406 1498 ntBASIC2.89□□□□□ -1.95
VCANP13611 RPL9P6-201ENST00000492764 598 ntBASIC2.89□□□□□ -1.95
VCANP13611 AC138956.1-201ENST00000508187 504 ntTSL 3 BASIC2.89□□□□□ -1.95
VCANP13611 AC016526.2-201ENST00000554225 520 ntTSL 3 BASIC2.89□□□□□ -1.95
VCANP13611 AC020895.1-201ENST00000595362 272 ntBASIC2.89□□□□□ -1.95
VCANP13611 AC233309.1-201ENST00000619522 751 ntBASIC2.89□□□□□ -1.95
VCANP13611 ZBTB38-220ENST00000514251 7683 ntAPPRIS P1 TSL 2 BASIC2.89□□□□□ -1.95
VCANP13611 ROS1-202ENST00000368508 7435 ntAPPRIS P2 TSL 1 (best) BASIC2.89□□□□□ -1.95
VCANP13611 CLCA4-201ENST00000370563 3211 ntAPPRIS P1 TSL 1 (best) BASIC2.89□□□□□ -1.95
VCANP13611 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC2.89□□□□□ -1.95
VCANP13611 PRRC2C-202ENST00000367742 10366 ntAPPRIS ALT2 TSL 5 BASIC2.89□□□□□ -1.95
VCANP13611 AL669831.5-220ENST00000412115 581 ntTSL 3 BASIC2.89□□□□□ -1.95
VCANP13611 RANP4-201ENST00000413361 655 ntBASIC2.89□□□□□ -1.95
VCANP13611 AC104777.3-201ENST00000416350 545 ntTSL 3 BASIC2.89□□□□□ -1.95
VCANP13611 AC107934.2-201ENST00000518653 310 ntBASIC2.89□□□□□ -1.95
VCANP13611 AC011602.1-201ENST00000546484 331 ntBASIC2.89□□□□□ -1.95
VCANP13611 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC2.89□□□□□ -1.95
VCANP13611 AL359821.1-201ENST00000605519 182 ntBASIC2.89□□□□□ -1.95
VCANP13611 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
VCANP13611 C1orf100-202ENST00000366537 483 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VCANP13611 AL356057.3-201ENST00000402607 340 ntBASIC2.88□□□□□ -1.95
VCANP13611 AL157709.1-201ENST00000412695 424 ntTSL 3 BASIC2.88□□□□□ -1.95
VCANP13611 AC108860.1-201ENST00000484521 383 ntBASIC2.88□□□□□ -1.95
VCANP13611 AC006445.2-201ENST00000510061 472 ntBASIC2.88□□□□□ -1.95
VCANP13611 OR2AG1-202ENST00000641258 6993 ntAPPRIS P1 BASIC2.88□□□□□ -1.95
VCANP13611 NEAT1-202ENST00000501122 22743 ntBASIC2.88□□□□□ -1.95
VCANP13611 BCL2A1-201ENST00000267953 1033 ntAPPRIS P1 TSL 1 (best) BASIC2.88□□□□□ -1.95
VCANP13611 EIF1AY-202ENST00000382772 746 ntTSL 1 (best) BASIC2.88□□□□□ -1.95
VCANP13611 MORF4L1P6-201ENST00000418771 268 ntBASIC2.88□□□□□ -1.95
Retrieved 100 of 98,524 protein–RNA pairs in 109.8 ms