Protein–RNA interactions for Protein: P0DP91

CSB-PGBD3, Chimeric ERCC6-PGBD3 protein, humanhuman

Predictions only

Length 1,061 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CSB-PGBD3P0DP91 AC018638.8-201ENST00000588755 281 ntBASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 AC011509.1-201ENST00000589512 164 ntTSL 3 BASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 AC004160.1-202ENST00000599917 578 ntTSL 5 BASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 BCRP9-201ENST00000605312 388 ntBASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 AL356515.1-201ENST00000611081 415 ntTSL 3 BASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 AC244472.2-201ENST00000617639 406 ntAPPRIS P1 BASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 ATP8A2P2-201ENST00000437678 1568 ntBASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 SAMD9L-204ENST00000437805 5757 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 AC092378.1-202ENST00000500117 2296 ntTSL 2 BASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 NR2C2-213ENST00000617312 8113 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 TRPM6-203ENST00000361255 8271 ntTSL 1 (best) BASIC7.02□□□□□ -1.29
CSB-PGBD3P0DP91 TOPBP1-201ENST00000260810 5378 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 PPP1R9A-206ENST00000433360 5369 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 RCOR3-201ENST00000367005 4246 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 NCOA7-201ENST00000229634 2998 ntAPPRIS ALT2 TSL 2 BASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 DAZ1-206ENST00000620725 1891 ntTSL 5 BASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 FARSBP1-201ENST00000435808 1778 ntBASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 AC011504.1-201ENST00000623331 4103 ntBASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 OR52B1P-201ENST00000316506 909 ntBASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 RNU6-1160P-201ENST00000384546 104 ntBASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 AL603766.1-201ENST00000407763 664 ntBASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 Y_RNA.608-201ENST00000410647 95 ntBASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 AL158839.1-201ENST00000413943 575 ntTSL 2 BASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 AL590139.1-201ENST00000416267 400 ntBASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 AL592293.2-201ENST00000422292 996 ntBASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 AC013402.2-201ENST00000424257 437 ntTSL 3 BASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 AL645634.2-201ENST00000431956 411 ntTSL 3 BASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 AC024082.2-201ENST00000434771 238 ntBASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 RHOT1P3-201ENST00000436571 331 ntBASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 AC092013.1-201ENST00000438795 332 ntBASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 MRPL50P4-201ENST00000446432 475 ntBASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 RNU6-420P-201ENST00000458780 107 ntBASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 RN7SL188P-201ENST00000469842 285 ntBASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 ST13P14-201ENST00000474095 734 ntBASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 RN7SL481P-201ENST00000477764 299 ntBASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 RPL35P6-201ENST00000490024 372 ntBASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 AC093278.1-201ENST00000494700 600 ntBASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 AC112204.1-201ENST00000502591 103 ntBASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 AC139783.2-201ENST00000504847 1145 ntBASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 AC113346.1-201ENST00000510150 287 ntTSL 3 BASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 AC010493.1-201ENST00000513479 292 ntBASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 AC011257.1-201ENST00000519048 281 ntTSL 3 BASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 AC011363.1-201ENST00000524198 458 ntTSL 5 BASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 ZNF705CP-201ENST00000530515 889 ntBASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 AP003781.1-201ENST00000543403 404 ntTSL 3 BASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 AC009117.1-201ENST00000563948 554 ntBASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 NQO1-206ENST00000564043 892 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 LARP7P2-201ENST00000575306 125 ntBASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 MIR3171-201ENST00000584270 74 ntBASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 TTN-AS1-243ENST00000591867 748 ntTSL 5 BASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 AC243960.4-201ENST00000600532 288 ntBASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 AL162413.1-201ENST00000603198 110 ntBASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 AL589935.1-202ENST00000612512 393 ntTSL 5 BASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 CD226-201ENST00000280200 12319 ntAPPRIS P2 TSL 1 (best) BASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 ZBED6-202ENST00000550078 12481 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 USP8-204ENST00000425032 3559 ntTSL 2 BASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 KC6-201ENST00000592302 1713 ntTSL 1 (best) BASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 IKZF2-201ENST00000342002 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 ZNF224-201ENST00000336976 3980 ntAPPRIS P1 TSL 1 (best) BASIC7.01□□□□□ -1.29
CSB-PGBD3P0DP91 RABGAP1L-202ENST00000325589 1880 ntTSL 1 (best) BASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 CLHC1-203ENST00000406076 1777 ntTSL 1 (best) BASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 RUFY3-202ENST00000381006 3098 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 XPNPEP3-201ENST00000357137 7988 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 SLCO1A2-212ENST00000458504 2008 ntTSL 2 BASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 IL18R1-202ENST00000334376 537 ntTSL 1 (best) BASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 RNY3P3-201ENST00000363816 102 ntBASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 RNY4P34-201ENST00000364779 95 ntBASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 LGI1-201ENST00000371413 1247 ntTSL 1 (best) BASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 RNU6-952P-201ENST00000391164 108 ntBASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 EIF5P1-201ENST00000400019 1231 ntBASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 DHFRP6-201ENST00000401776 268 ntBASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 AL023807.1-201ENST00000407932 359 ntBASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 AC004690.1-201ENST00000418216 328 ntBASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 DDX39BP1-205ENST00000422507 192 ntBASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 AF230666.1-201ENST00000429151 786 ntTSL 2 BASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 AC004888.1-201ENST00000450480 547 ntTSL 2 BASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 C1DP4-201ENST00000455429 424 ntBASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 MTCO1P42-201ENST00000457379 726 ntBASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 RC3H2-207ENST00000471874 749 ntTSL 1 (best) BASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 HAX1-208ENST00000483970 1151 ntTSL 2 BASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 BTF3P13-201ENST00000513224 490 ntBASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 AC018797.3-201ENST00000513388 1241 ntBASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 LINC00589-202ENST00000518623 938 ntTSL 4 BASIC7□□□□□ -1.29
CSB-PGBD3P0DP91 ARL6IP1P3-201ENST00000524544 560 ntBASIC7□□□□□ -1.29
Retrieved 100 of 98,524 protein–RNA pairs in 89.1 ms