Protein–RNA interactions for Protein: P09429

HMGB1, High mobility group protein B1, humanhuman

Known RBP Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P09429 SSR1P2-201ENST00000415208 787 ntBASIC5.44□□□□□ -1.54
HMGB1P09429 AC005062.1-204ENST00000415499 743 ntTSL 3 BASIC5.44□□□□□ -1.54
HMGB1P09429 BEND7P1-201ENST00000422058 457 ntBASIC5.44□□□□□ -1.54
HMGB1P09429 RPL21P91-201ENST00000429231 479 ntBASIC5.44□□□□□ -1.54
HMGB1P09429 TEX41-205ENST00000431734 529 ntTSL 4 BASIC5.44□□□□□ -1.54
HMGB1P09429 USP9YP35-201ENST00000435696 412 ntBASIC5.44□□□□□ -1.54
HMGB1P09429 COX7BP2-201ENST00000437976 242 ntBASIC5.44□□□□□ -1.54
HMGB1P09429 AC074327.1-202ENST00000443523 369 ntTSL 2 BASIC5.44□□□□□ -1.54
HMGB1P09429 SSXP4-201ENST00000451349 245 ntBASIC5.44□□□□□ -1.54
HMGB1P09429 AC093422.2-201ENST00000452599 686 ntTSL 2 BASIC5.44□□□□□ -1.54
HMGB1P09429 TIPARP-AS1-202ENST00000478005 554 ntTSL 4 BASIC5.44□□□□□ -1.54
HMGB1P09429 AC010587.2-201ENST00000511727 448 ntBASIC5.44□□□□□ -1.54
HMGB1P09429 AC097103.1-201ENST00000512398 273 ntTSL 3 BASIC5.44□□□□□ -1.54
HMGB1P09429 AC093677.1-201ENST00000514414 678 ntBASIC5.44□□□□□ -1.54
HMGB1P09429 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMGB1P09429 IGHVIII-2-1-201ENST00000518843 291 ntBASIC5.44□□□□□ -1.54
HMGB1P09429 MTND1P6-201ENST00000523621 946 ntBASIC5.44□□□□□ -1.54
HMGB1P09429 OR8G5-201ENST00000524943 1041 ntBASIC5.44□□□□□ -1.54
HMGB1P09429 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC5.44□□□□□ -1.54
HMGB1P09429 NACA-211ENST00000548563 827 ntTSL 5 BASIC5.44□□□□□ -1.54
HMGB1P09429 AL132780.1-201ENST00000548819 556 ntTSL 4 BASIC5.44□□□□□ -1.54
HMGB1P09429 AC026888.1-201ENST00000553348 559 ntTSL 4 BASIC5.44□□□□□ -1.54
HMGB1P09429 RPL21P7-201ENST00000557463 483 ntBASIC5.44□□□□□ -1.54
HMGB1P09429 CYCSP2-201ENST00000558168 301 ntBASIC5.44□□□□□ -1.54
HMGB1P09429 LINC02562-201ENST00000561705 785 ntTSL 2 BASIC5.44□□□□□ -1.54
HMGB1P09429 RN7SL176P-201ENST00000580352 264 ntBASIC5.44□□□□□ -1.54
HMGB1P09429 TTN-AS1-213ENST00000584485 838 ntTSL 3 BASIC5.44□□□□□ -1.54
HMGB1P09429 AC244505.7-201ENST00000599675 272 ntBASIC5.44□□□□□ -1.54
HMGB1P09429 AC006237.1-201ENST00000603816 480 ntTSL 3 BASIC5.44□□□□□ -1.54
HMGB1P09429 IGKV1OR2-9-201ENST00000603957 287 ntBASIC5.44□□□□□ -1.54
HMGB1P09429 IGKV1OR2-11-201ENST00000604120 287 ntBASIC5.44□□□□□ -1.54
HMGB1P09429 UBE2NL-201ENST00000618570 1185 ntAPPRIS P1 BASIC5.44□□□□□ -1.54
HMGB1P09429 AC005086.4-201ENST00000623065 213 ntBASIC5.44□□□□□ -1.54
HMGB1P09429 LINC01828-203ENST00000452716 3250 ntTSL 5 BASIC5.44□□□□□ -1.54
HMGB1P09429 MS4A14-203ENST00000395005 2813 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMGB1P09429 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC5.44□□□□□ -1.54
HMGB1P09429 AC005539.1-201ENST00000443768 1479 ntBASIC5.44□□□□□ -1.54
HMGB1P09429 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC5.44□□□□□ -1.54
HMGB1P09429 EMSY-207ENST00000525919 4074 ntAPPRIS ALT1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMGB1P09429 ARF4-206ENST00000489843 1360 ntTSL 3 BASIC5.43□□□□□ -1.54
HMGB1P09429 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC5.43□□□□□ -1.54
HMGB1P09429 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC5.43□□□□□ -1.54
HMGB1P09429 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC5.43□□□□□ -1.54
HMGB1P09429 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC5.43□□□□□ -1.54
HMGB1P09429 AL590240.1-201ENST00000334118 313 ntBASIC5.43□□□□□ -1.54
HMGB1P09429 RNU6-621P-201ENST00000364752 109 ntBASIC5.43□□□□□ -1.54
HMGB1P09429 MIR135A2-201ENST00000384854 100 ntBASIC5.43□□□□□ -1.54
HMGB1P09429 RNU6-882P-201ENST00000391025 103 ntBASIC5.43□□□□□ -1.54
HMGB1P09429 FCF1P5-201ENST00000406490 482 ntBASIC5.43□□□□□ -1.54
HMGB1P09429 LANCL1-AS1-201ENST00000416344 714 ntTSL 3 BASIC5.43□□□□□ -1.54
HMGB1P09429 DIAPH3-AS1-201ENST00000422052 428 ntTSL 3 BASIC5.43□□□□□ -1.54
HMGB1P09429 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC5.43□□□□□ -1.54
HMGB1P09429 AC004866.2-201ENST00000438285 481 ntBASIC5.43□□□□□ -1.54
HMGB1P09429 AL365271.1-201ENST00000448909 603 ntTSL 3 BASIC5.43□□□□□ -1.54
HMGB1P09429 AC010890.1-201ENST00000454699 469 ntTSL 4 BASIC5.43□□□□□ -1.54
HMGB1P09429 AC067945.3-201ENST00000456176 386 ntTSL 5 BASIC5.43□□□□□ -1.54
HMGB1P09429 AC092754.2-201ENST00000463506 460 ntBASIC5.43□□□□□ -1.54
HMGB1P09429 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC5.43□□□□□ -1.54
HMGB1P09429 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC5.43□□□□□ -1.54
HMGB1P09429 MTND4LP2-201ENST00000502312 285 ntBASIC5.43□□□□□ -1.54
HMGB1P09429 IL7R-208ENST00000511982 612 ntTSL 2 BASIC5.43□□□□□ -1.54
HMGB1P09429 FABP5P12-201ENST00000515543 389 ntBASIC5.43□□□□□ -1.54
HMGB1P09429 AP001804.3-201ENST00000525146 880 ntBASIC5.43□□□□□ -1.54
HMGB1P09429 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC5.43□□□□□ -1.54
HMGB1P09429 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC5.43□□□□□ -1.54
HMGB1P09429 MED28P6-201ENST00000558776 231 ntBASIC5.43□□□□□ -1.54
HMGB1P09429 AL355073.1-201ENST00000560296 517 ntTSL 4 BASIC5.43□□□□□ -1.54
HMGB1P09429 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC5.43□□□□□ -1.54
HMGB1P09429 AP005121.1-201ENST00000578243 469 ntTSL 3 BASIC5.43□□□□□ -1.54
HMGB1P09429 MIR4436B2-201ENST00000581415 91 ntBASIC5.43□□□□□ -1.54
HMGB1P09429 MIR4436B1-201ENST00000583272 91 ntBASIC5.43□□□□□ -1.54
HMGB1P09429 AP001029.2-202ENST00000588197 739 ntTSL 3 BASIC5.43□□□□□ -1.54
HMGB1P09429 AC090948.1-201ENST00000607464 549 ntBASIC5.43□□□□□ -1.54
HMGB1P09429 AL110115.1-201ENST00000614396 364 ntBASIC5.43□□□□□ -1.54
HMGB1P09429 AL033397.1-201ENST00000502390 3653 ntTSL 2 BASIC5.43□□□□□ -1.54
HMGB1P09429 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC5.43□□□□□ -1.54
HMGB1P09429 C8orf59-201ENST00000321777 325 ntTSL 1 (best) BASIC5.42□□□□□ -1.54
HMGB1P09429 SNORD96B-201ENST00000386148 79 ntBASIC5.42□□□□□ -1.54
HMGB1P09429 TANK-203ENST00000402568 878 ntTSL 5 BASIC5.42□□□□□ -1.54
HMGB1P09429 CEBPZOS-205ENST00000406711 687 ntAPPRIS P1 TSL 5 BASIC5.42□□□□□ -1.54
HMGB1P09429 AC084290.1-201ENST00000434995 374 ntBASIC5.42□□□□□ -1.54
HMGB1P09429 AL359378.1-201ENST00000439891 400 ntTSL 5 BASIC5.42□□□□□ -1.54
HMGB1P09429 ARL4AP3-201ENST00000441452 574 ntBASIC5.42□□□□□ -1.54
HMGB1P09429 FGF7P5-201ENST00000441829 291 ntBASIC5.42□□□□□ -1.54
HMGB1P09429 snoU13.8-201ENST00000458890 104 ntBASIC5.42□□□□□ -1.54
HMGB1P09429 AC109466.1-211ENST00000519327 496 ntTSL 3 BASIC5.42□□□□□ -1.54
HMGB1P09429 AC034205.1-201ENST00000520621 638 ntBASIC5.42□□□□□ -1.54
HMGB1P09429 AC010198.2-201ENST00000550612 259 ntBASIC5.42□□□□□ -1.54
HMGB1P09429 NBEAP1-201ENST00000554452 979 ntBASIC5.42□□□□□ -1.54
HMGB1P09429 AL391156.1-201ENST00000554965 554 ntBASIC5.42□□□□□ -1.54
HMGB1P09429 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC5.42□□□□□ -1.54
HMGB1P09429 CERS3-AS1-202ENST00000560718 432 ntTSL 3 BASIC5.42□□□□□ -1.54
HMGB1P09429 BNIP3P5-201ENST00000562290 498 ntBASIC5.42□□□□□ -1.54
HMGB1P09429 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC5.42□□□□□ -1.54
HMGB1P09429 AC090371.2-205ENST00000580366 490 ntTSL 3 BASIC5.42□□□□□ -1.54
HMGB1P09429 AL109935.2-201ENST00000587737 395 ntTSL 5 BASIC5.42□□□□□ -1.54
HMGB1P09429 MIR4527HG-203ENST00000600127 704 ntTSL 5 BASIC5.42□□□□□ -1.54
HMGB1P09429 AL133338.2-201ENST00000604292 736 ntBASIC5.42□□□□□ -1.54
HMGB1P09429 AC012443.1-201ENST00000605605 231 ntBASIC5.42□□□□□ -1.54
HMGB1P09429 VIS1.1-201ENST00000610517 203 ntBASIC5.42□□□□□ -1.54
Retrieved 100 of 98,524 protein–RNA pairs in 101.1 ms