Protein–RNA interactions for Protein: P07992

ERCC1, DNA excision repair protein ERCC-1, humanhuman

Predicted RBP Predictions only

Length 297 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC1P07992 ZFAT-AS1_1.1-201ENST00000620907 79 ntBASIC3.31□□□□□ -1.88
ERCC1P07992 CR392039.5-201ENST00000623201 510 ntBASIC3.31□□□□□ -1.88
ERCC1P07992 AC110491.2-201ENST00000624061 646 ntTSL 5 BASIC3.31□□□□□ -1.88
ERCC1P07992 AC068620.4-201ENST00000636730 1182 ntBASIC3.31□□□□□ -1.88
ERCC1P07992 OR6C71P-202ENST00000641886 1107 ntBASIC3.31□□□□□ -1.88
ERCC1P07992 FIGNL1-202ENST00000395556 3485 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
ERCC1P07992 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ERCC1P07992 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ERCC1P07992 SYTL2-203ENST00000359152 4123 ntAPPRIS ALT1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ERCC1P07992 STAU2-207ENST00000519961 3928 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
ERCC1P07992 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
ERCC1P07992 SCEL-202ENST00000377246 3081 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
ERCC1P07992 FAM71D-211ENST00000612183 1790 ntAPPRIS P1 TSL 2 BASIC3.3□□□□□ -1.88
ERCC1P07992 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ERCC1P07992 CCDC54-201ENST00000261058 1444 ntAPPRIS P1 BASIC3.3□□□□□ -1.88
ERCC1P07992 UFM1-201ENST00000239878 3138 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ERCC1P07992 BRCA2-206ENST00000544455 10984 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ERCC1P07992 CYP3A4-201ENST00000336411 2153 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ERCC1P07992 KLRC4-201ENST00000309384 930 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
ERCC1P07992 RNA5SP295-201ENST00000362655 121 ntBASIC3.3□□□□□ -1.88
ERCC1P07992 SPRR2D-203ENST00000368757 800 ntAPPRIS P1 TSL 3 BASIC3.3□□□□□ -1.88
ERCC1P07992 RNU6-1005P-201ENST00000384519 107 ntBASIC3.3□□□□□ -1.88
ERCC1P07992 MTCO3P31-201ENST00000405526 789 ntBASIC3.3□□□□□ -1.88
ERCC1P07992 AC092941.1-201ENST00000415940 427 ntTSL 5 BASIC3.3□□□□□ -1.88
ERCC1P07992 RPS3AP9-201ENST00000417027 792 ntBASIC3.3□□□□□ -1.88
ERCC1P07992 AC007349.1-201ENST00000419326 587 ntTSL 4 BASIC3.3□□□□□ -1.88
ERCC1P07992 AL390879.2-203ENST00000426943 1121 ntBASIC3.3□□□□□ -1.88
ERCC1P07992 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC3.3□□□□□ -1.88
ERCC1P07992 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ERCC1P07992 snoU13.3-201ENST00000459441 104 ntBASIC3.3□□□□□ -1.88
ERCC1P07992 TAF8-207ENST00000482432 556 ntTSL 2 BASIC3.3□□□□□ -1.88
ERCC1P07992 LNX1-AS2-201ENST00000502410 347 ntTSL 5 BASIC3.3□□□□□ -1.88
ERCC1P07992 AC027613.1-201ENST00000508414 457 ntTSL 3 BASIC3.3□□□□□ -1.88
ERCC1P07992 SLC7A11-AS1-201ENST00000510066 817 ntTSL 2 BASIC3.3□□□□□ -1.88
ERCC1P07992 EGFLAM-AS2-201ENST00000512603 466 ntTSL 5 BASIC3.3□□□□□ -1.88
ERCC1P07992 AC133963.2-201ENST00000513686 578 ntBASIC3.3□□□□□ -1.88
ERCC1P07992 EGFLAM-AS2-202ENST00000514377 539 ntTSL 3 BASIC3.3□□□□□ -1.88
ERCC1P07992 RN7SKP116-201ENST00000516902 319 ntBASIC3.3□□□□□ -1.88
ERCC1P07992 IGKV2D-36-201ENST00000518643 226 ntBASIC3.3□□□□□ -1.88
ERCC1P07992 AC090539.1-201ENST00000523907 434 ntTSL 3 BASIC3.3□□□□□ -1.88
ERCC1P07992 AC109635.4-202ENST00000531666 412 ntBASIC3.3□□□□□ -1.88
ERCC1P07992 YPEL5P3-201ENST00000547227 352 ntBASIC3.3□□□□□ -1.88
ERCC1P07992 AL049779.1-201ENST00000553306 670 ntTSL 2 BASIC3.3□□□□□ -1.88
ERCC1P07992 AC097467.3-204ENST00000595229 827 ntTSL 5 BASIC3.3□□□□□ -1.88
ERCC1P07992 AC022146.1-201ENST00000595307 847 ntBASIC3.3□□□□□ -1.88
ERCC1P07992 AL163642.2-201ENST00000604722 1019 ntBASIC3.3□□□□□ -1.88
ERCC1P07992 AC005972.3-201ENST00000606304 481 ntBASIC3.3□□□□□ -1.88
ERCC1P07992 AC006133.1-201ENST00000617106 264 ntBASIC3.3□□□□□ -1.88
ERCC1P07992 AL161616.2-201ENST00000622001 565 ntTSL 4 BASIC3.3□□□□□ -1.88
ERCC1P07992 AC020923.1-201ENST00000624021 917 ntBASIC3.3□□□□□ -1.88
ERCC1P07992 PCLO-206ENST00000437081 3786 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
ERCC1P07992 THOC1-219ENST00000616322 2078 ntAPPRIS ALT1 TSL 5 BASIC3.3□□□□□ -1.88
ERCC1P07992 NEB-218ENST00000603639 25578 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
ERCC1P07992 NEB-219ENST00000604864 25578 ntAPPRIS ALT2 TSL 5 BASIC3.3□□□□□ -1.88
ERCC1P07992 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ERCC1P07992 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC3.29□□□□□ -1.88
ERCC1P07992 SYNE1-212ENST00000423061 27436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.29□□□□□ -1.88
ERCC1P07992 LRRN3-203ENST00000422987 3513 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ERCC1P07992 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.29□□□□□ -1.88
ERCC1P07992 ERBIN-201ENST00000284037 8647 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ERCC1P07992 AC093274.1-201ENST00000503488 5454 ntTSL 5 BASIC3.29□□□□□ -1.88
ERCC1P07992 RNU6-374P-201ENST00000364146 108 ntBASIC3.29□□□□□ -1.88
ERCC1P07992 CGA-201ENST00000369582 729 ntTSL 5 BASIC3.29□□□□□ -1.88
ERCC1P07992 RNU6-629P-201ENST00000384061 103 ntBASIC3.29□□□□□ -1.88
ERCC1P07992 RNU6-1181P-201ENST00000384191 106 ntBASIC3.29□□□□□ -1.88
ERCC1P07992 RNU6-837P-201ENST00000391056 108 ntBASIC3.29□□□□□ -1.88
ERCC1P07992 SSXP10-201ENST00000402595 565 ntBASIC3.29□□□□□ -1.88
ERCC1P07992 AC008280.1-201ENST00000418851 412 ntBASIC3.29□□□□□ -1.88
ERCC1P07992 AL591419.1-201ENST00000427423 339 ntBASIC3.29□□□□□ -1.88
ERCC1P07992 DIAPH3-AS2-201ENST00000428656 367 ntTSL 3 BASIC3.29□□□□□ -1.88
ERCC1P07992 ZFAND6P1-201ENST00000434138 605 ntBASIC3.29□□□□□ -1.88
ERCC1P07992 MTCYBP31-201ENST00000438855 1122 ntBASIC3.29□□□□□ -1.88
ERCC1P07992 ANKRD30BP3-201ENST00000444850 1070 ntBASIC3.29□□□□□ -1.88
ERCC1P07992 RPL7P52-201ENST00000449200 742 ntBASIC3.29□□□□□ -1.88
ERCC1P07992 BX248409.1-201ENST00000455497 255 ntBASIC3.29□□□□□ -1.88
ERCC1P07992 AC099563.1-201ENST00000456086 418 ntBASIC3.29□□□□□ -1.88
ERCC1P07992 LINC01312-202ENST00000456347 813 ntTSL 1 (best) BASIC3.29□□□□□ -1.88
ERCC1P07992 AC026355.2-201ENST00000456755 723 ntTSL 2 BASIC3.29□□□□□ -1.88
ERCC1P07992 ACTR3P3-201ENST00000480448 893 ntBASIC3.29□□□□□ -1.88
ERCC1P07992 RPS27P23-201ENST00000487608 251 ntBASIC3.29□□□□□ -1.88
ERCC1P07992 RPL23AP73-201ENST00000492507 471 ntBASIC3.29□□□□□ -1.88
ERCC1P07992 AC092666.1-202ENST00000493400 442 ntTSL 2 BASIC3.29□□□□□ -1.88
ERCC1P07992 AC104057.1-201ENST00000515547 497 ntBASIC3.29□□□□□ -1.88
ERCC1P07992 AC104393.1-201ENST00000517495 255 ntTSL 3 BASIC3.29□□□□□ -1.88
ERCC1P07992 AC023442.2-201ENST00000526455 270 ntTSL 3 BASIC3.29□□□□□ -1.88
ERCC1P07992 AC013549.2-201ENST00000526953 489 ntTSL 3 BASIC3.29□□□□□ -1.88
ERCC1P07992 AL121766.1-201ENST00000547436 487 ntBASIC3.29□□□□□ -1.88
ERCC1P07992 AL121576.1-201ENST00000556055 276 ntBASIC3.29□□□□□ -1.88
ERCC1P07992 AC006960.3-201ENST00000561845 705 ntBASIC3.29□□□□□ -1.88
ERCC1P07992 AC004147.3-201ENST00000577709 375 ntTSL 3 BASIC3.29□□□□□ -1.88
ERCC1P07992 MIR3158-1-201ENST00000583596 81 ntBASIC3.29□□□□□ -1.88
ERCC1P07992 INTS6-AS1-210ENST00000595424 301 ntTSL 5 BASIC3.29□□□□□ -1.88
ERCC1P07992 AP001172.1-201ENST00000602921 581 ntTSL 3 BASIC3.29□□□□□ -1.88
ERCC1P07992 AC079880.2-201ENST00000603790 1213 ntBASIC3.29□□□□□ -1.88
ERCC1P07992 AL450270.1-201ENST00000606160 391 ntBASIC3.29□□□□□ -1.88
ERCC1P07992 MIR8058-201ENST00000615737 89 ntBASIC3.29□□□□□ -1.88
ERCC1P07992 PLCE1P1-201ENST00000622094 305 ntBASIC3.29□□□□□ -1.88
ERCC1P07992 SMIM18-202ENST00000626298 114 ntTSL 5 BASIC3.29□□□□□ -1.88
ERCC1P07992 SAMD9-201ENST00000379958 6852 ntAPPRIS P1 TSL 1 (best) BASIC3.29□□□□□ -1.88
ERCC1P07992 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.29□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 90.4 ms