Protein–RNA interactions for Protein: P07339

CTSD, Cathepsin D, humanhuman

Predicted RBP Predictions only

Length 412 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSDP07339 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC2.64□□□□□ -1.99
CTSDP07339 AC002546.1-201ENST00000588041 2504 ntBASIC2.64□□□□□ -1.99
CTSDP07339 OXR1-205ENST00000442977 2956 ntTSL 2 BASIC2.64□□□□□ -1.99
CTSDP07339 KTN1-206ENST00000413890 4473 ntAPPRIS ALT2 TSL 5 BASIC2.63□□□□□ -1.99
CTSDP07339 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.63□□□□□ -1.99
CTSDP07339 AC093908.1-201ENST00000623125 8092 ntBASIC2.63□□□□□ -1.99
CTSDP07339 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CTSDP07339 HMGB1P10-201ENST00000395823 563 ntBASIC2.63□□□□□ -1.99
CTSDP07339 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC2.63□□□□□ -1.99
CTSDP07339 AC091286.1-201ENST00000431233 461 ntBASIC2.63□□□□□ -1.99
CTSDP07339 AC018865.1-201ENST00000433507 578 ntTSL 4 BASIC2.63□□□□□ -1.99
CTSDP07339 ARL4AP4-201ENST00000434170 518 ntBASIC2.63□□□□□ -1.99
CTSDP07339 AL138916.1-201ENST00000436295 455 ntTSL 3 BASIC2.63□□□□□ -1.99
CTSDP07339 RPL21P23-201ENST00000446654 460 ntBASIC2.63□□□□□ -1.99
CTSDP07339 MTUS2-AS2-203ENST00000452602 651 ntTSL 3 BASIC2.63□□□□□ -1.99
CTSDP07339 RPL21P8-201ENST00000465083 535 ntBASIC2.63□□□□□ -1.99
CTSDP07339 LINC01327-201ENST00000498413 535 ntTSL 3 BASIC2.63□□□□□ -1.99
CTSDP07339 PANCR-201ENST00000503456 493 ntTSL 5 BASIC2.63□□□□□ -1.99
CTSDP07339 LINC02146-201ENST00000504244 509 ntTSL 3 BASIC2.63□□□□□ -1.99
CTSDP07339 AC104304.1-201ENST00000505797 291 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
CTSDP07339 ADGRL3-AS1-204ENST00000509461 481 ntTSL 5 BASIC2.63□□□□□ -1.99
CTSDP07339 LINC02497-201ENST00000515292 507 ntTSL 3 BASIC2.63□□□□□ -1.99
CTSDP07339 OR5B10P-201ENST00000532869 642 ntBASIC2.63□□□□□ -1.99
CTSDP07339 SARNP-203ENST00000552080 726 ntTSL 2 BASIC2.63□□□□□ -1.99
CTSDP07339 APOC2-203ENST00000590360 744 ntAPPRIS P1 TSL 3 BASIC2.63□□□□□ -1.99
CTSDP07339 AC078899.3-201ENST00000599065 212 ntBASIC2.63□□□□□ -1.99
CTSDP07339 Metazoa_SRP.117-201ENST00000615106 292 ntBASIC2.63□□□□□ -1.99
CTSDP07339 AC104971.4-201ENST00000622763 249 ntTSL 5 BASIC2.63□□□□□ -1.99
CTSDP07339 RPL23AP61-201ENST00000623642 466 ntBASIC2.63□□□□□ -1.99
CTSDP07339 OR51G1-201ENST00000623849 966 ntAPPRIS P1 BASIC2.63□□□□□ -1.99
CTSDP07339 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC2.63□□□□□ -1.99
CTSDP07339 AL122126.1-201ENST00000546905 1318 ntBASIC2.63□□□□□ -1.99
CTSDP07339 SLAIN1-203ENST00000351546 2394 ntTSL 2 BASIC2.63□□□□□ -1.99
CTSDP07339 AC100800.1-201ENST00000524252 2054 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CTSDP07339 MIPOL1-206ENST00000545536 2073 ntTSL 5 BASIC2.62□□□□□ -1.99
CTSDP07339 ZMYM2-203ENST00000382874 10139 ntAPPRIS P1 TSL 1 (best) BASIC2.62□□□□□ -1.99
CTSDP07339 ZRANB2-201ENST00000254821 2821 ntAPPRIS ALT2 TSL 1 (best) BASIC2.62□□□□□ -1.99
CTSDP07339 GTF2H2B-203ENST00000508065 1432 ntBASIC2.62□□□□□ -1.99
CTSDP07339 ABCC9-202ENST00000261201 4650 ntAPPRIS ALT1 TSL 5 BASIC2.62□□□□□ -1.99
CTSDP07339 RNA5SP189-201ENST00000364920 115 ntBASIC2.62□□□□□ -1.99
CTSDP07339 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC2.62□□□□□ -1.99
CTSDP07339 RNA5SP274-201ENST00000410484 108 ntBASIC2.62□□□□□ -1.99
CTSDP07339 AC073071.1-201ENST00000412410 388 ntTSL 3 BASIC2.62□□□□□ -1.99
CTSDP07339 LINC00446-201ENST00000414743 459 ntTSL 5 BASIC2.62□□□□□ -1.99
CTSDP07339 GCA-203ENST00000429691 824 ntTSL 3 BASIC2.62□□□□□ -1.99
CTSDP07339 HMGN2P31-201ENST00000432430 273 ntBASIC2.62□□□□□ -1.99
CTSDP07339 YWHAZP7-201ENST00000436906 631 ntBASIC2.62□□□□□ -1.99
CTSDP07339 HMGN2P20-201ENST00000437531 273 ntBASIC2.62□□□□□ -1.99
CTSDP07339 AC009987.1-201ENST00000446888 806 ntTSL 5 BASIC2.62□□□□□ -1.99
CTSDP07339 BUD31P2-201ENST00000449374 300 ntBASIC2.62□□□□□ -1.99
CTSDP07339 ELOCP23-201ENST00000452014 332 ntBASIC2.62□□□□□ -1.99
CTSDP07339 AC112204.2-201ENST00000503269 374 ntTSL 2 BASIC2.62□□□□□ -1.99
CTSDP07339 ATG10-AS1-201ENST00000504846 648 ntBASIC2.62□□□□□ -1.99
CTSDP07339 PPP2R2B-IT1-201ENST00000505921 447 ntTSL 3 BASIC2.62□□□□□ -1.99
CTSDP07339 HMGN1P15-201ENST00000513870 295 ntBASIC2.62□□□□□ -1.99
CTSDP07339 SNORA67.7-201ENST00000516664 135 ntBASIC2.62□□□□□ -1.99
CTSDP07339 RN7SKP282-201ENST00000516824 299 ntBASIC2.62□□□□□ -1.99
CTSDP07339 AC007536.1-201ENST00000533382 349 ntBASIC2.62□□□□□ -1.99
CTSDP07339 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC2.62□□□□□ -1.99
CTSDP07339 AL157394.1-201ENST00000562983 1224 ntBASIC2.62□□□□□ -1.99
CTSDP07339 MIR1254-2-201ENST00000579553 63 ntBASIC2.62□□□□□ -1.99
CTSDP07339 AC245389.1-201ENST00000605141 529 ntBASIC2.62□□□□□ -1.99
CTSDP07339 AC018754.1-201ENST00000607486 925 ntBASIC2.62□□□□□ -1.99
CTSDP07339 uc_338.25-201ENST00000613756 156 ntBASIC2.62□□□□□ -1.99
CTSDP07339 AC116563.2-201ENST00000624751 535 ntBASIC2.62□□□□□ -1.99
CTSDP07339 AC244258.1-201ENST00000637553 1071 ntBASIC2.62□□□□□ -1.99
CTSDP07339 MGAT4C-210ENST00000620241 3194 ntAPPRIS P1 TSL 2 BASIC2.62□□□□□ -1.99
CTSDP07339 OXR1-206ENST00000449762 2621 ntTSL 1 (best) BASIC2.62□□□□□ -1.99
CTSDP07339 AC108206.1-201ENST00000570186 4159 ntBASIC2.62□□□□□ -1.99
CTSDP07339 ZNF322-205ENST00000471278 2675 ntAPPRIS P1 TSL 5 BASIC2.62□□□□□ -1.99
CTSDP07339 TRIQK-214ENST00000521988 3672 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CTSDP07339 PPIG-207ENST00000448752 2498 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CTSDP07339 RGPD3-202ENST00000409886 5594 ntAPPRIS P2 TSL 1 (best) BASIC2.61□□□□□ -1.99
CTSDP07339 RNASE6-201ENST00000304677 1061 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
CTSDP07339 U8.9-201ENST00000365667 134 ntBASIC2.61□□□□□ -1.99
CTSDP07339 LINC00862-202ENST00000367356 759 ntTSL 3 BASIC2.61□□□□□ -1.99
CTSDP07339 SAR1AP2-201ENST00000392696 594 ntBASIC2.61□□□□□ -1.99
CTSDP07339 ATP5F1P3-201ENST00000397213 657 ntBASIC2.61□□□□□ -1.99
CTSDP07339 RNU2-65P-201ENST00000410162 185 ntBASIC2.61□□□□□ -1.99
CTSDP07339 XKRYP4-201ENST00000414395 483 ntBASIC2.61□□□□□ -1.99
CTSDP07339 AC069157.1-201ENST00000421749 137 ntBASIC2.61□□□□□ -1.99
CTSDP07339 AC092641.1-201ENST00000440229 772 ntBASIC2.61□□□□□ -1.99
CTSDP07339 RPL31P20-201ENST00000449593 360 ntBASIC2.61□□□□□ -1.99
CTSDP07339 XKRYP5-201ENST00000449659 483 ntBASIC2.61□□□□□ -1.99
CTSDP07339 AL137001.1-201ENST00000450212 199 ntTSL 3 BASIC2.61□□□□□ -1.99
CTSDP07339 AC104308.1-201ENST00000454621 333 ntBASIC2.61□□□□□ -1.99
CTSDP07339 RPL5P13-201ENST00000462840 709 ntBASIC2.61□□□□□ -1.99
CTSDP07339 AC012181.1-201ENST00000479895 423 ntBASIC2.61□□□□□ -1.99
CTSDP07339 AP004217.1-201ENST00000480579 346 ntBASIC2.61□□□□□ -1.99
CTSDP07339 DNAJC12-205ENST00000483798 769 ntTSL 3 BASIC2.61□□□□□ -1.99
CTSDP07339 RPL7P38-201ENST00000488396 739 ntBASIC2.61□□□□□ -1.99
CTSDP07339 RPL7P23-201ENST00000493874 747 ntBASIC2.61□□□□□ -1.99
CTSDP07339 AP002812.1-201ENST00000495378 474 ntBASIC2.61□□□□□ -1.99
CTSDP07339 ACTR3BP4-201ENST00000503033 1244 ntBASIC2.61□□□□□ -1.99
CTSDP07339 RN7SKP157-201ENST00000516174 282 ntBASIC2.61□□□□□ -1.99
CTSDP07339 SNORA31.26-201ENST00000517250 137 ntBASIC2.61□□□□□ -1.99
CTSDP07339 AC012413.1-201ENST00000521294 519 ntTSL 2 BASIC2.61□□□□□ -1.99
CTSDP07339 LINC02552-203ENST00000545630 583 ntTSL 2 BASIC2.61□□□□□ -1.99
CTSDP07339 NACA-211ENST00000548563 827 ntTSL 5 BASIC2.61□□□□□ -1.99
CTSDP07339 TIMM9-206ENST00000555593 796 ntAPPRIS P1 TSL 1 (best) BASIC2.61□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 82.8 ms